Experiment set2S174 for Lysobacter sp. OAE881

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media

200 most detrimental genes:

  gene name fitness t score description  
ABIE51_RS07905 +1.0 1.8 polysaccharide deacetylase family protein compare
ABIE51_RS11185 +0.8 1.6 hypothetical protein compare
ABIE51_RS03480 +0.8 1.5 hypothetical protein compare
ABIE51_RS18250 +0.8 2.2 hypothetical protein compare
ABIE51_RS11750 +0.7 2.8 CBS domain-containing protein compare
ABIE51_RS08775 +0.7 3.0 pseudouridine synthase compare
ABIE51_RS14570 +0.7 3.1 DNA-3-methyladenine glycosylase compare
ABIE51_RS14370 +0.6 1.6 hypothetical protein compare
ABIE51_RS06070 +0.6 1.6 fructosamine kinase family protein compare
ABIE51_RS02615 +0.6 1.4 alpha/beta hydrolase compare
ABIE51_RS05590 +0.6 2.1 hypothetical protein compare
ABIE51_RS09850 +0.6 1.1 YaiI/YqxD family protein compare
ABIE51_RS07410 +0.6 3.1 polysaccharide pyruvyl transferase family protein compare
ABIE51_RS10225 +0.6 1.4 NAD(P)H-hydrate dehydratase compare
ABIE51_RS07465 +0.6 1.0 hypothetical protein compare
ABIE51_RS07880 +0.6 2.2 oligosaccharide flippase family protein compare
ABIE51_RS07770 +0.6 1.8 RNA-binding S4 domain-containing protein compare
ABIE51_RS06480 +0.5 0.8 Smr/MutS family protein compare
ABIE51_RS13495 +0.5 1.7 TRZ/ATZ family hydrolase compare
ABIE51_RS15380 +0.5 2.3 Grx4 family monothiol glutaredoxin compare
ABIE51_RS07870 +0.5 0.7 hypothetical protein compare
ABIE51_RS06960 +0.5 4.8 TonB-dependent receptor compare
ABIE51_RS16770 +0.5 2.2 sigma-54 dependent transcriptional regulator compare
ABIE51_RS06715 +0.5 0.7 DUF998 domain-containing protein compare
ABIE51_RS10660 +0.5 2.5 alternative oxidase compare
ABIE51_RS05615 +0.5 1.8 proprotein convertase P-domain-containing protein compare
ABIE51_RS07535 +0.5 1.8 phosphate ABC transporter permease PstA compare
ABIE51_RS00670 +0.5 1.3 hypothetical protein compare
ABIE51_RS17505 +0.5 4.7 winged helix-turn-helix domain-containing protein compare
ABIE51_RS11170 +0.5 1.8 methyl-accepting chemotaxis protein compare
ABIE51_RS17570 +0.5 1.6 2-isopropylmalate synthase compare
ABIE51_RS13780 +0.5 1.0 YigZ family protein compare
ABIE51_RS05215 +0.5 1.7 twitching motility response regulator PilG compare
ABIE51_RS12040 +0.5 1.4 hypothetical protein compare
ABIE51_RS09800 +0.5 1.0 VOC family protein compare
ABIE51_RS15755 +0.5 1.3 non-heme iron oxygenase ferredoxin subunit compare
ABIE51_RS02705 +0.5 2.1 hypothetical protein compare
ABIE51_RS09245 +0.5 1.9 KTSC domain-containing protein compare
ABIE51_RS09680 +0.5 1.5 outer membrane protein OmpK compare
ABIE51_RS16010 +0.5 1.7 prolyl oligopeptidase family serine peptidase compare
ABIE51_RS15510 +0.5 1.2 transporter associated domain-containing protein compare
ABIE51_RS05465 +0.5 1.7 adenine phosphoribosyltransferase compare
ABIE51_RS06490 +0.5 1.6 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABIE51_RS02605 +0.5 2.7 EF-hand domain-containing protein compare
ABIE51_RS04000 +0.5 2.1 CsbD family protein compare
ABIE51_RS00700 +0.4 1.3 ABC transporter ATP-binding protein compare
ABIE51_RS13970 +0.4 0.8 hypothetical protein compare
ABIE51_RS06095 +0.4 1.5 class III extradiol ring-cleavage dioxygenase compare
ABIE51_RS02400 +0.4 1.9 hypothetical protein compare
ABIE51_RS14615 +0.4 0.8 cell division topological specificity factor MinE compare
ABIE51_RS07945 +0.4 1.2 hypothetical protein compare
ABIE51_RS14735 +0.4 2.4 DNA-3-methyladenine glycosylase compare
ABIE51_RS12125 +0.4 0.6 TonB family protein compare
ABIE51_RS06305 +0.4 2.3 GNAT family N-acetyltransferase compare
ABIE51_RS18685 +0.4 1.8 SRPBCC family protein compare
ABIE51_RS10375 +0.4 1.4 glycine betaine ABC transporter substrate-binding protein compare
ABIE51_RS11670 +0.4 2.0 RnfH family protein compare
ABIE51_RS17500 +0.4 3.6 helix-turn-helix domain-containing protein compare
ABIE51_RS03845 +0.4 1.3 cbb3-type cytochrome c oxidase subunit 3 compare
ABIE51_RS12690 +0.4 2.0 GIY-YIG nuclease family protein compare
ABIE51_RS17990 +0.4 1.9 dethiobiotin synthase compare
ABIE51_RS02775 +0.4 0.6 VOC family protein compare
ABIE51_RS14590 +0.4 2.7 response regulator transcription factor compare
ABIE51_RS06950 +0.4 3.2 RNA polymerase sigma factor compare
ABIE51_RS14780 +0.4 0.9 hypothetical protein compare
ABIE51_RS18435 +0.4 1.6 DUF2884 family protein compare
ABIE51_RS10430 +0.4 0.7 hypothetical protein compare
ABIE51_RS06630 +0.4 1.9 ROK family protein compare
ABIE51_RS10590 +0.4 1.5 hypothetical protein compare
ABIE51_RS14310 +0.4 0.9 organic hydroperoxide resistance protein compare
ABIE51_RS10715 +0.4 0.9 hypothetical protein compare
ABIE51_RS16920 +0.4 1.1 chemotaxis protein CheW compare
ABIE51_RS16935 +0.4 1.2 hypothetical protein compare
ABIE51_RS09875 +0.4 1.4 K+/H+ antiporter subunit F compare
ABIE51_RS15660 +0.4 0.7 PhzF family phenazine biosynthesis protein compare
ABIE51_RS02785 +0.4 0.7 DUF2946 family protein compare
ABIE51_RS12875 +0.4 1.4 TerC family protein compare
ABIE51_RS11530 +0.4 1.4 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
ABIE51_RS12685 +0.4 0.8 kynureninase compare
ABIE51_RS14135 +0.4 0.5 tRNA-Val compare
ABIE51_RS17695 +0.4 2.3 hypothetical protein compare
ABIE51_RS04350 +0.4 3.1 glycosyltransferase family 2 protein compare
ABIE51_RS02910 +0.4 0.5 (2Fe-2S)-binding protein compare
ABIE51_RS09570 +0.3 1.1 CopL family metal-binding regulatory protein compare
ABIE51_RS00165 +0.3 1.9 hypothetical protein compare
ABIE51_RS11395 +0.3 1.0 DksA/TraR family C4-type zinc finger protein compare
ABIE51_RS17075 +0.3 1.4 DUF4019 domain-containing protein compare
ABIE51_RS15125 +0.3 1.2 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
ABIE51_RS15695 +0.3 0.9 DUF1439 domain-containing protein compare
ABIE51_RS13065 +0.3 1.3 hypothetical protein compare
ABIE51_RS18465 +0.3 1.4 YajQ family cyclic di-GMP-binding protein compare
ABIE51_RS07515 +0.3 2.4 DUF692 domain-containing protein compare
ABIE51_RS07420 +0.3 1.4 UDP-glucuronic acid decarboxylase family protein compare
ABIE51_RS13055 +0.3 1.4 hypothetical protein compare
ABIE51_RS06600 +0.3 2.3 rhomboid family intramembrane serine protease compare
ABIE51_RS14700 +0.3 0.6 response regulator compare
ABIE51_RS02150 +0.3 1.4 sigma-70 region 4 domain-containing protein compare
ABIE51_RS14390 +0.3 1.0 response regulator compare
ABIE51_RS14290 +0.3 2.0 cation diffusion facilitator family transporter compare
ABIE51_RS13705 +0.3 1.8 L,D-transpeptidase family protein compare
ABIE51_RS16595 +0.3 1.9 EAL domain-containing protein compare
ABIE51_RS04490 +0.3 2.1 RDD family protein compare
ABIE51_RS02935 +0.3 1.1 TolC family protein compare
ABIE51_RS08900 +0.3 1.2 DUF3011 domain-containing protein compare
ABIE51_RS07415 +0.3 1.1 histidine phosphatase family protein compare
ABIE51_RS08580 +0.3 1.8 hypothetical protein compare
ABIE51_RS16190 +0.3 2.4 homoserine O-succinyltransferase compare
ABIE51_RS04260 +0.3 1.9 DUF4398 domain-containing protein compare
ABIE51_RS16990 +0.3 1.6 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS13770 +0.3 0.9 RNA polymerase sigma factor compare
ABIE51_RS07790 +0.3 1.7 CinA family protein compare
ABIE51_RS13675 +0.3 1.4 diaminopimelate decarboxylase compare
ABIE51_RS18900 +0.3 1.7 2-hydroxychromene-2-carboxylate isomerase compare
ABIE51_RS10370 +0.3 1.0 L-dopachrome tautomerase-related protein compare
ABIE51_RS11005 +0.3 0.6 AraC family transcriptional regulator compare
ABIE51_RS04265 +0.3 2.5 OmpA family protein compare
ABIE51_RS06325 +0.3 1.9 alpha/beta hydrolase compare
ABIE51_RS01955 +0.3 1.4 hypothetical protein compare
ABIE51_RS04955 +0.3 1.3 adenosylcobinamide-phosphate synthase CbiB compare
ABIE51_RS14740 +0.3 1.5 DUF6289 family protein compare
ABIE51_RS05355 +0.3 2.2 TPM domain-containing protein compare
ABIE51_RS01685 +0.3 1.7 helix-turn-helix transcriptional regulator compare
ABIE51_RS16755 +0.3 0.8 hypothetical protein compare
ABIE51_RS18305 +0.3 1.3 hypothetical protein compare
ABIE51_RS09855 +0.3 1.8 HWE histidine kinase domain-containing protein compare
ABIE51_RS06625 +0.3 1.2 thioredoxin family protein compare
ABIE51_RS13710 +0.3 2.1 dicarboxylate/amino acid:cation symporter compare
ABIE51_RS09670 +0.3 1.7 MFS transporter compare
ABIE51_RS15165 +0.3 2.0 LEA type 2 family protein compare
ABIE51_RS01165 +0.3 2.2 multidrug resistance efflux transporter family protein compare
ABIE51_RS10795 +0.3 1.6 cytochrome C oxidase subunit III compare
ABIE51_RS15465 +0.3 1.6 ABC-F family ATP-binding cassette domain-containing protein compare
ABIE51_RS02810 +0.3 1.6 hypothetical protein compare
ABIE51_RS10905 +0.3 1.9 aldose epimerase family protein compare
ABIE51_RS15440 +0.3 1.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE51_RS13420 +0.3 2.3 hypothetical protein compare
ABIE51_RS16565 +0.3 1.0 hypothetical protein compare
ABIE51_RS05170 +0.3 2.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE51_RS11500 +0.3 2.1 hypothetical protein compare
ABIE51_RS13785 +0.3 0.9 ABC transporter transmembrane domain-containing protein compare
ABIE51_RS03400 +0.3 1.6 DsrE family protein compare
ABIE51_RS13830 +0.3 1.3 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
ABIE51_RS16970 +0.3 0.4 sensor histidine kinase compare
ABIE51_RS03375 +0.3 1.6 AraC family transcriptional regulator compare
ABIE51_RS15210 +0.3 0.6 DUF1801 domain-containing protein compare
ABIE51_RS15060 +0.3 1.9 serine hydrolase compare
ABIE51_RS10095 +0.3 1.1 Na+/H+ antiporter subunit E compare
ABIE51_RS14470 +0.3 1.8 YadA-like family protein compare
ABIE51_RS05205 +0.3 1.3 energy transducer TonB compare
ABIE51_RS10925 +0.3 0.7 FadR/GntR family transcriptional regulator compare
ABIE51_RS06640 +0.3 1.0 MBL fold metallo-hydrolase compare
ABIE51_RS00870 +0.3 0.9 hypothetical protein compare
ABIE51_RS04905 +0.3 1.1 lactoylglutathione lyase compare
ABIE51_RS18810 +0.3 1.1 hypothetical protein compare
ABIE51_RS10545 +0.3 1.2 2-dehydro-3-deoxygalactonokinase compare
ABIE51_RS02060 +0.3 1.5 monovalent cation:proton antiporter-2 (CPA2) family protein compare
ABIE51_RS14040 +0.3 1.5 molybdenum cofactor biosynthesis protein MoaE compare
ABIE51_RS06660 +0.3 1.8 L,D-transpeptidase compare
ABIE51_RS17430 +0.3 1.1 NAD(P)-dependent oxidoreductase compare
ABIE51_RS05310 +0.3 0.6 ABC transporter ATP-binding protein compare
ABIE51_RS00160 +0.3 0.8 hypothetical protein compare
ABIE51_RS14715 +0.3 1.0 efflux RND transporter permease subunit compare
ABIE51_RS14455 +0.3 1.7 aquaporin Z compare
ABIE51_RS13975 +0.3 1.4 Maf family nucleotide pyrophosphatase compare
ABIE51_RS18475 +0.3 0.7 HAD family phosphatase compare
ABIE51_RS15850 +0.3 1.8 LysR family transcriptional regulator compare
ABIE51_RS11585 +0.3 1.6 response regulator transcription factor compare
ABIE51_RS14720 +0.3 1.0 LytTR family DNA-binding domain-containing protein compare
ABIE51_RS02130 +0.3 1.8 NYN domain-containing protein compare
ABIE51_RS02460 +0.3 1.6 ATP-binding protein compare
ABIE51_RS01935 +0.3 1.4 glycosyltransferase family 2 protein compare
ABIE51_RS15520 +0.3 1.4 magnesium/cobalt transporter CorA compare
ABIE51_RS03890 +0.3 1.3 hypothetical protein compare
ABIE51_RS04255 +0.3 1.0 PilT/PilU family type 4a pilus ATPase compare
ABIE51_RS00580 +0.3 1.4 PepSY-associated TM helix domain-containing protein compare
ABIE51_RS03895 +0.3 1.4 CPXCG motif-containing cysteine-rich protein compare
ABIE51_RS08010 +0.3 0.8 tRNA-Glu compare
ABIE51_RS01795 +0.2 1.4 DUF4129 domain-containing protein compare
ABIE51_RS01560 +0.2 2.1 gamma-glutamyltransferase compare
ABIE51_RS13550 +0.2 0.7 tRNA-Ala compare
ABIE51_RS02905 +0.2 1.3 XdhC family protein compare
ABIE51_RS14640 +0.2 0.9 amino acid permease compare
ABIE51_RS18500 +0.2 1.1 ABC transporter ATP-binding protein compare
ABIE51_RS13445 +0.2 1.4 nucleoside deaminase compare
ABIE51_RS08875 +0.2 2.0 mechanosensitive ion channel domain-containing protein compare
ABIE51_RS15425 +0.2 1.7 glutathione S-transferase N-terminal domain-containing protein compare
ABIE51_RS04095 +0.2 1.5 sodium:calcium antiporter compare
ABIE51_RS10675 +0.2 0.6 cupin domain-containing protein compare
ABIE51_RS05550 +0.2 0.3 hypothetical protein compare
ABIE51_RS13255 +0.2 1.6 hypothetical protein compare
ABIE51_RS14325 +0.2 1.8 phosphoglycerate mutase family protein compare
ABIE51_RS13090 +0.2 0.9 DUF2188 domain-containing protein compare
ABIE51_RS06955 +0.2 1.7 FecR domain-containing protein compare
ABIE51_RS07700 +0.2 1.4 formyltetrahydrofolate deformylase compare
ABIE51_RS16645 +0.2 1.9 ATP-binding protein compare
ABIE51_RS00215 +0.2 1.1 pseudouridine synthase compare
ABIE51_RS04925 +0.2 1.6 ATP-dependent chaperone ClpB compare
ABIE51_RS11200 +0.2 1.1 SRPBCC domain-containing protein compare
ABIE51_RS04580 +0.2 1.8 glycosyltransferase compare
ABIE51_RS16665 +0.2 1.5 chemotaxis protein compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in agar plate interaction experiments