Experiment set2S172 for Lysobacter sp. OAE881
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
Group: agar plate interactionMedia: R2A
Culturing: Lysobacter_OAE881_ML4, agar plate, Aerobic, at 30 (C), (Solid)
By: Cat Adams on 1/3/23
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Peptidoglycan Biosynthesis | 1 |
| Type IV pilus | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| peptidoglycan biosynthesis IV (Enterococcus faecium) | 17 | 11 | 2 |
| peptidoglycan biosynthesis II (staphylococci) | 17 | 11 | 2 |
| peptidoglycan biosynthesis V (β-lactam resistance) | 17 | 10 | 2 |
| peptidoglycan biosynthesis I (meso-diaminopimelate containing) | 12 | 10 | 1 |
| peptidoglycan maturation (meso-diaminopimelate containing) | 12 | 3 | 1 |
| peptidoglycan biosynthesis III (mycobacteria) | 15 | 10 | 1 |