Experiment set2S167 for Lysobacter sp. OAE881

Compare to:

Parafilmed volatile R2A_HEPES agar plate with no fungus

200 most important genes:

  gene name fitness t score description  
ABIE51_RS15390 -5.1 -3.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE51_RS05300 -4.7 -10.1 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS17630 -4.7 -4.6 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS16395 -4.7 -3.2 PDZ domain-containing protein compare
ABIE51_RS14085 -4.6 -3.2 DUF6165 family protein compare
ABIE51_RS00065 -4.4 -4.3 orotate phosphoribosyltransferase compare
ABIE51_RS14070 -4.2 -6.1 glycosyltransferase family 9 protein compare
ABIE51_RS15620 -4.1 -7.4 dTDP-glucose 4,6-dehydratase compare
ABIE51_RS16260 -4.1 -4.6 hypothetical protein compare
ABIE51_RS19025 -3.9 -9.0 thiol:disulfide interchange protein DsbA/DsbL compare
ABIE51_RS05540 -3.9 -3.5 hypothetical protein compare
ABIE51_RS02280 -3.8 -7.7 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS04805 -3.8 -2.6 A24 family peptidase compare
ABIE51_RS04125 -3.7 -6.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE51_RS01280 -3.7 -7.5 lipid-binding SYLF domain-containing protein compare
ABIE51_RS03160 -3.6 -21.0 septal ring lytic transglycosylase RlpA family protein compare
ABIE51_RS05180 -3.6 -6.4 glycosyltransferase compare
ABIE51_RS18545 -3.5 -2.0 DUF6249 domain-containing protein compare
ABIE51_RS03940 -3.4 -10.1 response regulator transcription factor compare
ABIE51_RS09065 -3.2 -10.1 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS03165 -3.1 -22.6 D-alanyl-D-alanine carboxypeptidase family protein compare
ABIE51_RS02300 -3.1 -7.2 lauroyl acyltransferase compare
ABIE51_RS17760 -3.1 -9.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE51_RS15615 -3.1 -11.3 glucose-1-phosphate thymidylyltransferase RfbA compare
ABIE51_RS09365 -2.9 -3.9 glycosyltransferase family 4 protein compare
ABIE51_RS06340 -2.9 -12.1 hypothetical protein compare
ABIE51_RS14555 -2.8 -1.9 M15 family metallopeptidase compare
ABIE51_RS09045 -2.8 -4.7 GntR family transcriptional regulator compare
ABIE51_RS16015 -2.6 -3.3 aspartate carbamoyltransferase catalytic subunit compare
ABIE51_RS04505 -2.5 -8.7 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS00515 -2.4 -4.9 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
ABIE51_RS05295 -2.4 -5.7 response regulator transcription factor compare
ABIE51_RS09375 -2.3 -7.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABIE51_RS04620 -2.3 -12.2 serine hydroxymethyltransferase compare
ABIE51_RS00635 -2.3 -7.0 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS11490 -2.2 -17.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE51_RS05550 -2.2 -1.5 hypothetical protein compare
ABIE51_RS19030 -2.2 -8.1 endonuclease/exonuclease/phosphatase family protein compare
ABIE51_RS00035 -2.2 -17.1 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS04390 -2.1 -9.9 glycoside hydrolase family 99-like domain-containing protein compare
ABIE51_RS02265 -2.1 -2.6 glycosyltransferase family 2 protein compare
ABIE51_RS16510 -2.1 -7.2 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS04310 -2.1 -2.6 glycosyltransferase compare
ABIE51_RS14345 -2.0 -6.6 aminomethyl-transferring glycine dehydrogenase compare
ABIE51_RS04245 -2.0 -4.5 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS13455 -1.9 -3.4 membrane protein insertion efficiency factor YidD compare
ABIE51_RS16360 -1.9 -4.5 glycine cleavage system protein GcvH compare
ABIE51_RS06180 -1.9 -6.0 amidophosphoribosyltransferase compare
ABIE51_RS17190 -1.8 -3.5 penicillin-binding protein 1A compare
ABIE51_RS06000 -1.8 -8.6 pyridoxal phosphate-dependent aminotransferase compare
ABIE51_RS00250 -1.8 -4.9 olefin beta-lactone synthetase compare
ABIE51_RS03185 -1.8 -7.7 carboxy terminal-processing peptidase compare
ABIE51_RS06015 -1.7 -2.5 methylisocitrate lyase compare
ABIE51_RS11615 -1.7 -8.5 carbamoyl-phosphate synthase large subunit compare
ABIE51_RS07575 -1.7 -3.1 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS16365 -1.7 -4.8 glycine cleavage system aminomethyltransferase GcvT compare
ABIE51_RS13205 -1.7 -2.4 hydroxymethylglutaryl-CoA lyase compare
ABIE51_RS11495 -1.6 -6.3 ATP-dependent Clp protease adapter ClpS compare
ABIE51_RS04335 -1.6 -9.2 hypothetical protein compare
ABIE51_RS04190 -1.6 -3.9 indole-3-glycerol phosphate synthase TrpC compare
ABIE51_RS01635 -1.6 -5.8 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE51_RS14155 -1.6 -7.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABIE51_RS17770 -1.6 -3.4 phosphoribosylamine--glycine ligase compare
ABIE51_RS08720 -1.5 -6.6 heme exporter protein CcmB compare
ABIE51_RS04835 -1.5 -7.8 glycosyltransferase family 2 protein compare
ABIE51_RS14530 -1.5 -5.3 hypothetical protein compare
ABIE51_RS15970 -1.4 -3.2 HPr(Ser) kinase/phosphatase compare
ABIE51_RS10670 -1.4 -1.3 LysR family transcriptional regulator compare
ABIE51_RS00800 -1.4 -1.0 biopolymer transporter ExbD compare
ABIE51_RS02450 -1.4 -5.0 MarR family transcriptional regulator compare
ABIE51_RS13480 -1.4 -1.9 phytoene/squalene synthase family protein compare
ABIE51_RS09340 -1.4 -4.5 (d)CMP kinase compare
ABIE51_RS03155 -1.4 -8.8 lytic murein transglycosylase B compare
ABIE51_RS14090 -1.4 -5.8 PP2C family serine/threonine-protein phosphatase compare
ABIE51_RS17705 -1.4 -10.0 protein-disulfide reductase DsbD compare
ABIE51_RS17270 -1.4 -2.9 DNA-directed RNA polymerase subunit omega compare
ABIE51_RS04920 -1.4 -2.0 trehalose-phosphatase compare
ABIE51_RS05045 -1.4 -2.2 Holliday junction branch migration protein RuvA compare
ABIE51_RS13260 -1.3 -8.8 amino acid permease compare
ABIE51_RS08700 -1.3 -9.3 heme lyase CcmF/NrfE family subunit compare
ABIE51_RS13115 -1.3 -8.2 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein compare
ABIE51_RS00700 -1.2 -1.6 ABC transporter ATP-binding protein compare
ABIE51_RS11625 -1.2 -5.5 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
ABIE51_RS08250 -1.2 -3.9 phosphoribosylanthranilate isomerase compare
ABIE51_RS08260 -1.2 -6.3 tryptophan synthase subunit beta compare
ABIE51_RS15990 -1.2 -2.2 PTS sugar transporter subunit IIA compare
ABIE51_RS14060 -1.2 -4.4 MBL fold metallo-hydrolase compare
ABIE51_RS13300 -1.2 -4.5 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS09370 -1.1 -7.5 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABIE51_RS15890 -1.1 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS17200 -1.1 -6.8 citrate synthase compare
ABIE51_RS08715 -1.1 -6.7 heme ABC transporter permease CcmC compare
ABIE51_RS13305 -1.1 -1.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE51_RS04180 -1.1 -4.5 anthranilate phosphoribosyltransferase compare
ABIE51_RS09425 -1.1 -1.2 helix-turn-helix domain-containing protein compare
ABIE51_RS08705 -1.1 -6.6 cytochrome c maturation protein CcmE compare
ABIE51_RS14150 -1.1 -5.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE51_RS07320 -1.1 -6.2 packaged DNA stabilization gp4 family protein compare
ABIE51_RS08695 -1.0 -3.8 DsbE family thiol:disulfide interchange protein compare
ABIE51_RS15095 -1.0 -3.3 TMEM43 family protein compare
ABIE51_RS01695 -1.0 -2.5 50S ribosomal protein L33 compare
ABIE51_RS13720 -1.0 -4.9 aldehyde dehydrogenase family protein compare
ABIE51_RS04475 -1.0 -6.8 leucyl aminopeptidase compare
ABIE51_RS15410 -1.0 -1.0 FHA domain-containing protein compare
ABIE51_RS07875 -1.0 -1.0 alpha/beta hydrolase compare
ABIE51_RS00085 -1.0 -4.5 dUTP diphosphatase compare
ABIE51_RS01515 -1.0 -4.8 phospholipase D family protein compare
ABIE51_RS07005 -1.0 -3.8 asparagine synthase B compare
ABIE51_RS18820 -1.0 -2.2 NADP-dependent malic enzyme compare
ABIE51_RS14495 -1.0 -7.3 acyl-CoA thioesterase II compare
ABIE51_RS08265 -0.9 -4.7 tryptophan synthase subunit alpha compare
ABIE51_RS02910 -0.9 -1.1 (2Fe-2S)-binding protein compare
ABIE51_RS16735 -0.9 -2.7 flagellar export chaperone FliS compare
ABIE51_RS13170 -0.9 -1.4 hypothetical protein compare
ABIE51_RS03935 -0.9 -4.9 hypothetical protein compare
ABIE51_RS05175 -0.9 -5.0 hypothetical protein compare
ABIE51_RS10470 -0.9 -5.9 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS07290 -0.9 -3.6 DUF5681 domain-containing protein compare
ABIE51_RS03265 -0.9 -3.8 trypsin-like peptidase domain-containing protein compare
ABIE51_RS16485 -0.9 -1.6 adenosylhomocysteinase compare
ABIE51_RS08690 -0.9 -1.2 cytochrome c-type biogenesis protein compare
ABIE51_RS04710 -0.9 -0.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE51_RS07245 -0.9 -5.6 lysozyme compare
ABIE51_RS16330 -0.9 -2.1 hotdog fold domain-containing protein compare
ABIE51_RS15015 -0.9 -2.2 preprotein translocase subunit YajC compare
ABIE51_RS04570 -0.8 -1.5 general secretion pathway protein GspN compare
ABIE51_RS07350 -0.8 -6.0 hypothetical protein compare
ABIE51_RS07225 -0.8 -4.5 hypothetical protein compare
ABIE51_RS16855 -0.8 -2.8 AAA family ATPase compare
ABIE51_RS13315 -0.8 -2.1 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABIE51_RS06800 -0.8 -0.7 ribosome biogenesis factor YjgA compare
ABIE51_RS17495 -0.8 -7.6 TonB-dependent receptor compare
ABIE51_RS13310 -0.8 -1.9 imidazole glycerol phosphate synthase subunit HisH compare
ABIE51_RS07265 -0.8 -5.3 DUF3307 domain-containing protein compare
ABIE51_RS09770 -0.8 -6.2 cytochrome o ubiquinol oxidase subunit I compare
ABIE51_RS04565 -0.8 -2.4 type II secretion system protein GspM compare
ABIE51_RS09105 -0.8 -2.2 NAD-glutamate dehydrogenase domain-containing protein compare
ABIE51_RS14575 -0.8 -3.1 DUF423 domain-containing protein compare
ABIE51_RS13145 -0.8 -4.3 acetyl-CoA C-acyltransferase compare
ABIE51_RS13320 -0.8 -4.1 histidinol-phosphate transaminase compare
ABIE51_RS04295 -0.8 -3.1 cystathionine gamma-synthase compare
ABIE51_RS07260 -0.8 -2.3 hypothetical protein compare
ABIE51_RS01095 -0.8 -3.5 cell division protein ZapE compare
ABIE51_RS06785 -0.8 -5.4 ribonuclease G compare
ABIE51_RS15240 -0.8 -1.7 integration host factor subunit alpha compare
ABIE51_RS08870 -0.7 -3.8 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC compare
ABIE51_RS06715 -0.7 -0.8 DUF998 domain-containing protein compare
ABIE51_RS15660 -0.7 -1.0 PhzF family phenazine biosynthesis protein compare
ABIE51_RS01360 -0.7 -1.2 nitrogen regulation protein NR(I) compare
ABIE51_RS05375 -0.7 -4.3 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABIE51_RS07255 -0.7 -3.3 serine protease compare
ABIE51_RS07305 -0.7 -3.1 hypothetical protein compare
ABIE51_RS19175 -0.7 -2.0 hypothetical protein compare
ABIE51_RS13330 -0.7 -1.5 ATP phosphoribosyltransferase compare
ABIE51_RS06555 -0.7 -3.6 protease modulator HflC compare
ABIE51_RS09780 -0.7 -2.0 cytochrome o ubiquinol oxidase subunit IV compare
ABIE51_RS07365 -0.7 -6.3 glycosyl hydrolase family 28-related protein compare
ABIE51_RS08880 -0.7 -4.6 chromosome segregation protein SMC compare
ABIE51_RS15975 -0.7 -3.5 RNase adapter RapZ compare
ABIE51_RS12565 -0.7 -5.5 acyl-CoA dehydrogenase family protein compare
ABIE51_RS14650 -0.7 -2.0 VOC family protein compare
ABIE51_RS07295 -0.7 -5.3 hypothetical protein compare
ABIE51_RS02175 -0.7 -5.2 signal peptide peptidase SppA compare
ABIE51_RS15020 -0.7 -3.3 tRNA guanosine(34) transglycosylase Tgt compare
ABIE51_RS07050 -0.7 -2.3 hypothetical protein compare
ABIE51_RS07330 -0.7 -2.2 hypothetical protein compare
ABIE51_RS07335 -0.7 -2.5 hypothetical protein compare
ABIE51_RS18515 -0.7 -1.8 tRNA-Leu compare
ABIE51_RS07190 -0.7 -2.3 SANT/Myb-like DNA-binding domain-containing protein compare
ABIE51_RS13540 -0.7 -3.4 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
ABIE51_RS00235 -0.7 -4.1 2-alkyl-3-oxoalkanoate reductase compare
ABIE51_RS05030 -0.7 -1.4 alpha/beta hydrolase compare
ABIE51_RS16320 -0.7 -3.9 TetR/AcrR family transcriptional regulator compare
ABIE51_RS09230 -0.7 -1.7 50S ribosomal protein L9 compare
ABIE51_RS02585 -0.7 -1.3 SDR family oxidoreductase compare
ABIE51_RS00785 -0.6 -2.5 energy transducer TonB compare
ABIE51_RS03135 -0.6 -2.3 rod shape-determining protein MreC compare
ABIE51_RS03760 -0.6 -1.2 hypothetical protein compare
ABIE51_RS15755 -0.6 -2.0 non-heme iron oxygenase ferredoxin subunit compare
ABIE51_RS07310 -0.6 -4.1 hypothetical protein compare
ABIE51_RS11680 -0.6 -1.8 SsrA-binding protein SmpB compare
ABIE51_RS07360 -0.6 -5.7 hypothetical protein compare
ABIE51_RS18510 -0.6 -2.3 tRNA-OTHER compare
ABIE51_RS06540 -0.6 -1.0 RNA chaperone Hfq compare
ABIE51_RS11790 -0.6 -4.2 4a-hydroxytetrahydrobiopterin dehydratase compare
ABIE51_RS07300 -0.6 -4.6 portal protein compare
ABIE51_RS14165 -0.6 -2.3 tRNA-Leu compare
ABIE51_RS07315 -0.6 -3.7 P22 phage major capsid protein family protein compare
ABIE51_RS08780 -0.6 -2.6 SMC-Scp complex subunit ScpB compare
ABIE51_RS00270 -0.6 -1.9 DUF4156 domain-containing protein compare
ABIE51_RS19165 -0.6 -3.4 heme o synthase compare
ABIE51_RS02975 -0.6 -3.9 DmsC/YnfH family molybdoenzyme membrane anchor subunit compare
ABIE51_RS07250 -0.6 -2.4 hypothetical protein compare
ABIE51_RS07270 -0.6 -3.3 hypothetical protein compare
ABIE51_RS10480 -0.6 -0.8 helix-turn-helix domain-containing protein compare
ABIE51_RS08785 -0.6 -4.3 ScpA family protein compare
ABIE51_RS09790 -0.6 -2.4 ATP-binding protein compare
ABIE51_RS01720 -0.6 -3.7 NAD-dependent epimerase/dehydratase family protein compare
ABIE51_RS18535 -0.6 -1.1 hypothetical protein compare
ABIE51_RS15870 -0.6 -2.3 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in agar plate interaction control experiments