Experiment set2S161 for Lysobacter sp. OAE881

Compare to:

Parafilmed volatile R2A agar plate with no fungus

200 most detrimental genes:

  gene name fitness t score description  
ABIE51_RS07870 +1.0 1.4 hypothetical protein compare
ABIE51_RS05035 +0.9 1.7 YebC/PmpR family DNA-binding transcriptional regulator compare
ABIE51_RS11980 +0.8 3.1 alpha/beta hydrolase compare
ABIE51_RS03335 +0.7 1.3 hypothetical protein compare
ABIE51_RS12640 +0.7 1.5 hypothetical protein compare
ABIE51_RS08520 +0.6 1.7 response regulator transcription factor compare
ABIE51_RS07430 +0.6 0.8 NAD-dependent epimerase/dehydratase family protein compare
ABIE51_RS03480 +0.6 1.5 hypothetical protein compare
ABIE51_RS15535 +0.6 1.9 hypothetical protein compare
ABIE51_RS06490 +0.6 2.2 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABIE51_RS13675 +0.5 2.2 diaminopimelate decarboxylase compare
ABIE51_RS07415 +0.5 2.0 histidine phosphatase family protein compare
ABIE51_RS16770 +0.5 3.2 sigma-54 dependent transcriptional regulator compare
ABIE51_RS10770 +0.5 1.2 OBAP family protein compare
ABIE51_RS13685 +0.5 1.0 transglutaminase domain-containing protein compare
ABIE51_RS11070 +0.5 1.6 bestrophin family ion channel compare
ABIE51_RS02640 +0.5 2.2 DUF1427 family protein compare
ABIE51_RS14135 +0.5 0.8 tRNA-Val compare
ABIE51_RS05605 +0.5 1.4 proprotein convertase P-domain-containing protein compare
ABIE51_RS15695 +0.5 1.0 DUF1439 domain-containing protein compare
ABIE51_RS01955 +0.5 2.1 hypothetical protein compare
ABIE51_RS04920 +0.5 0.8 trehalose-phosphatase compare
ABIE51_RS02050 +0.5 3.0 YcgL domain-containing protein compare
ABIE51_RS15785 +0.4 1.7 FAD:protein FMN transferase compare
ABIE51_RS08200 +0.4 1.9 lysoplasmalogenase compare
ABIE51_RS04260 +0.4 2.7 DUF4398 domain-containing protein compare
ABIE51_RS02745 +0.4 1.0 hypothetical protein compare
ABIE51_RS00255 +0.4 1.2 YkgJ family cysteine cluster protein compare
ABIE51_RS12700 +0.4 1.9 exodeoxyribonuclease I compare
ABIE51_RS01880 +0.4 1.8 pteridine-dependent deoxygenase compare
ABIE51_RS06960 +0.4 3.8 TonB-dependent receptor compare
ABIE51_RS02400 +0.4 1.9 hypothetical protein compare
ABIE51_RS11715 +0.4 1.3 GIY-YIG nuclease family protein compare
ABIE51_RS10215 +0.4 1.8 gluconokinase, GntK/IdnK-type compare
ABIE51_RS01220 +0.4 1.3 aldehyde-activating protein compare
ABIE51_RS04265 +0.4 3.0 OmpA family protein compare
ABIE51_RS17555 +0.4 0.8 ACT domain-containing protein compare
ABIE51_RS14830 +0.4 2.6 MFS transporter compare
ABIE51_RS16875 +0.4 0.6 protein phosphatase CheZ compare
ABIE51_RS03660 +0.4 1.0 mannitol dehydrogenase family protein compare
ABIE51_RS02555 +0.4 1.4 tryptophan-rich sensory protein compare
ABIE51_RS08775 +0.4 1.1 pseudouridine synthase compare
ABIE51_RS10690 +0.4 1.4 NAD(P)-binding oxidoreductase compare
ABIE51_RS05170 +0.4 3.4 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE51_RS06770 +0.4 0.9 hypothetical protein compare
ABIE51_RS07880 +0.4 2.2 oligosaccharide flippase family protein compare
ABIE51_RS04350 +0.4 3.2 glycosyltransferase family 2 protein compare
ABIE51_RS00670 +0.4 1.0 hypothetical protein compare
ABIE51_RS14370 +0.4 0.9 hypothetical protein compare
ABIE51_RS01890 +0.4 2.3 phosphopantetheine-binding protein compare
ABIE51_RS14195 +0.4 0.7 Na+/H+ antiporter NhaC family protein compare
ABIE51_RS09005 +0.4 2.1 VOC family protein compare
ABIE51_RS15135 +0.4 1.9 hypothetical protein compare
ABIE51_RS15040 +0.4 1.8 phytase compare
ABIE51_RS09995 +0.4 1.8 pseudouridine synthase compare
ABIE51_RS14810 +0.4 1.7 GFA family protein compare
ABIE51_RS18215 +0.4 1.2 fasciclin domain-containing protein compare
ABIE51_RS18610 +0.4 1.7 DUF3016 domain-containing protein compare
ABIE51_RS15410 +0.4 0.5 FHA domain-containing protein compare
ABIE51_RS10870 +0.4 1.0 N-acetylmuramoyl-L-alanine amidase compare
ABIE51_RS19080 +0.4 1.7 PH domain-containing protein compare
ABIE51_RS07905 +0.4 1.2 polysaccharide deacetylase family protein compare
ABIE51_RS13550 +0.3 1.0 tRNA-Ala compare
ABIE51_RS08000 +0.3 2.1 hypothetical protein compare
ABIE51_RS04000 +0.3 0.9 CsbD family protein compare
ABIE51_RS15205 +0.3 1.2 hypothetical protein compare
ABIE51_RS10830 +0.3 1.0 MBL fold metallo-hydrolase compare
ABIE51_RS11315 +0.3 1.2 NADPH-dependent FMN reductase compare
ABIE51_RS13225 +0.3 1.7 GNAT family N-acetyltransferase compare
ABIE51_RS10545 +0.3 1.4 2-dehydro-3-deoxygalactonokinase compare
ABIE51_RS07135 +0.3 1.0 YdaS family helix-turn-helix protein compare
ABIE51_RS02765 +0.3 1.8 hypothetical protein compare
ABIE51_RS06095 +0.3 1.3 class III extradiol ring-cleavage dioxygenase compare
ABIE51_RS14590 +0.3 2.0 response regulator transcription factor compare
ABIE51_RS10265 +0.3 1.9 sensory rhodopsin transducer compare
ABIE51_RS07910 +0.3 0.7 polysaccharide deacetylase family protein compare
ABIE51_RS17505 +0.3 2.9 winged helix-turn-helix domain-containing protein compare
ABIE51_RS06950 +0.3 2.6 RNA polymerase sigma factor compare
ABIE51_RS07720 +0.3 0.6 MarR family transcriptional regulator compare
ABIE51_RS12990 +0.3 1.8 hypothetical protein compare
ABIE51_RS06755 +0.3 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
ABIE51_RS02910 +0.3 0.3 (2Fe-2S)-binding protein compare
ABIE51_RS18225 +0.3 1.4 hypothetical protein compare
ABIE51_RS06600 +0.3 2.4 rhomboid family intramembrane serine protease compare
ABIE51_RS07875 +0.3 0.4 alpha/beta hydrolase compare
ABIE51_RS16595 +0.3 2.2 EAL domain-containing protein compare
ABIE51_RS15465 +0.3 0.9 ABC-F family ATP-binding cassette domain-containing protein compare
ABIE51_RS12280 +0.3 0.8 phasin family protein compare
ABIE51_RS09190 +0.3 1.9 nuclear transport factor 2 family protein compare
ABIE51_RS06640 +0.3 1.8 MBL fold metallo-hydrolase compare
ABIE51_RS14500 +0.3 1.2 hypothetical protein compare
ABIE51_RS13640 +0.3 1.8 hypothetical protein compare
ABIE51_RS09745 +0.3 1.5 DUF4410 domain-containing protein compare
ABIE51_RS17280 +0.3 1.5 YicC/YloC family endoribonuclease compare
ABIE51_RS17500 +0.3 2.7 helix-turn-helix domain-containing protein compare
ABIE51_RS09015 +0.3 1.1 class II fumarate hydratase compare
ABIE51_RS02460 +0.3 1.8 ATP-binding protein compare
ABIE51_RS13440 +0.3 1.1 GNAT family N-acetyltransferase compare
ABIE51_RS16920 +0.3 1.5 chemotaxis protein CheW compare
ABIE51_RS16190 +0.3 2.5 homoserine O-succinyltransferase compare
ABIE51_RS08750 +0.3 2.1 hypothetical protein compare
ABIE51_RS02055 +0.3 1.3 ankyrin repeat domain-containing protein compare
ABIE51_RS14735 +0.3 1.7 DNA-3-methyladenine glycosylase compare
ABIE51_RS18125 +0.3 1.5 hypothetical protein compare
ABIE51_RS00290 +0.3 0.8 M20 family metallopeptidase compare
ABIE51_RS04355 +0.3 2.2 NAD(P)-dependent oxidoreductase compare
ABIE51_RS13255 +0.3 1.9 hypothetical protein compare
ABIE51_RS05680 +0.3 1.5 DapH/DapD/GlmU-related protein compare
ABIE51_RS00875 +0.3 1.3 response regulator transcription factor compare
ABIE51_RS01130 +0.3 1.9 Rid family hydrolase compare
ABIE51_RS18710 +0.3 1.7 HAD-IA family hydrolase compare
ABIE51_RS06075 +0.3 0.9 zinc-binding alcohol dehydrogenase family protein compare
ABIE51_RS01055 +0.3 2.1 efflux RND transporter periplasmic adaptor subunit compare
ABIE51_RS16665 +0.3 1.7 chemotaxis protein compare
ABIE51_RS14290 +0.3 2.2 cation diffusion facilitator family transporter compare
ABIE51_RS06625 +0.3 1.1 thioredoxin family protein compare
ABIE51_RS07465 +0.3 0.2 hypothetical protein compare
ABIE51_RS11820 +0.3 1.4 isocitrate lyase/phosphoenolpyruvate mutase family protein compare
ABIE51_RS04975 +0.3 1.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE51_RS07695 +0.3 1.1 hypothetical protein compare
ABIE51_RS07410 +0.3 1.1 polysaccharide pyruvyl transferase family protein compare
ABIE51_RS02405 +0.3 1.7 hypothetical protein compare
ABIE51_RS09850 +0.3 1.3 YaiI/YqxD family protein compare
ABIE51_RS08445 +0.3 1.9 response regulator transcription factor compare
ABIE51_RS07525 +0.3 1.2 phosphate signaling complex protein PhoU compare
ABIE51_RS07925 +0.3 0.8 glycosyltransferase compare
ABIE51_RS12775 +0.3 1.4 pirin family protein compare
ABIE51_RS14890 +0.3 1.4 YceI family protein compare
ABIE51_RS06480 +0.3 0.4 Smr/MutS family protein compare
ABIE51_RS04060 +0.3 0.6 NUDIX domain-containing protein compare
ABIE51_RS17075 +0.3 1.1 DUF4019 domain-containing protein compare
ABIE51_RS09075 +0.3 1.5 DUF2058 family protein compare
ABIE51_RS11325 +0.3 0.8 DUF1622 domain-containing protein compare
ABIE51_RS04130 +0.3 1.3 DnaJ domain-containing protein compare
ABIE51_RS10965 +0.3 1.3 DUF6491 family protein compare
ABIE51_RS02170 +0.3 1.8 MATE family efflux transporter compare
ABIE51_RS09030 +0.3 0.9 GDSL-type esterase/lipase family protein compare
ABIE51_RS05630 +0.2 0.8 NAD(P)H:quinone oxidoreductase compare
ABIE51_RS12920 +0.2 1.2 BON domain-containing protein compare
ABIE51_RS01210 +0.2 1.9 DUF2007 domain-containing protein compare
ABIE51_RS05005 +0.2 0.4 PhzF family phenazine biosynthesis isomerase compare
ABIE51_RS15780 +0.2 1.6 DUF4198 domain-containing protein compare
ABIE51_RS15850 +0.2 1.7 LysR family transcriptional regulator compare
ABIE51_RS05465 +0.2 0.7 adenine phosphoribosyltransferase compare
ABIE51_RS07915 +0.2 1.2 O-antigen ligase family protein compare
ABIE51_RS01685 +0.2 1.4 helix-turn-helix transcriptional regulator compare
ABIE51_RS10785 +0.2 1.4 cytochrome c oxidase subunit II compare
ABIE51_RS07990 +0.2 1.2 glycine cleavage system protein R compare
ABIE51_RS04080 +0.2 1.4 DUF559 domain-containing protein compare
ABIE51_RS07395 +0.2 1.3 glycosyltransferase family 9 protein compare
ABIE51_RS04580 +0.2 1.6 glycosyltransferase compare
ABIE51_RS15415 +0.2 1.0 DUF3301 domain-containing protein compare
ABIE51_RS15900 +0.2 1.1 DUF3108 domain-containing protein compare
ABIE51_RS00160 +0.2 0.7 hypothetical protein compare
ABIE51_RS11515 +0.2 1.4 high frequency lysogenization protein HflD compare
ABIE51_RS05510 +0.2 0.8 NUDIX hydrolase compare
ABIE51_RS07515 +0.2 1.5 DUF692 domain-containing protein compare
ABIE51_RS09965 +0.2 0.5 AraC family transcriptional regulator compare
ABIE51_RS06290 +0.2 1.3 TetR/AcrR family transcriptional regulator compare
ABIE51_RS04205 +0.2 1.2 GNAT family N-acetyltransferase compare
ABIE51_RS06955 +0.2 1.7 FecR domain-containing protein compare
ABIE51_RS15165 +0.2 1.6 LEA type 2 family protein compare
ABIE51_RS06580 +0.2 1.7 DUF47 family protein compare
ABIE51_RS09900 +0.2 0.9 DUF202 domain-containing protein compare
ABIE51_RS11260 +0.2 1.3 glycosyltransferase compare
ABIE51_RS13275 +0.2 1.0 acireductone dioxygenase compare
ABIE51_RS13595 +0.2 1.9 hypothetical protein compare
ABIE51_RS03620 +0.2 0.6 hypothetical protein compare
ABIE51_RS10935 +0.2 1.5 galactonate dehydratase compare
ABIE51_RS02645 +0.2 1.4 amidohydrolase compare
ABIE51_RS16565 +0.2 1.1 hypothetical protein compare
ABIE51_RS01340 +0.2 1.0 ribonuclease domain-containing protein compare
ABIE51_RS05475 +0.2 0.7 LysR substrate-binding domain-containing protein compare
ABIE51_RS15280 +0.2 0.7 hypothetical protein compare
ABIE51_RS14520 +0.2 1.4 hypothetical protein compare
ABIE51_RS06675 +0.2 1.5 murein L,D-transpeptidase catalytic domain family protein compare
ABIE51_RS06635 +0.2 1.3 hypothetical protein compare
ABIE51_RS12685 +0.2 0.5 kynureninase compare
ABIE51_RS09845 +0.2 1.1 hypothetical protein compare
ABIE51_RS10260 +0.2 1.6 glycogen debranching N-terminal domain-containing protein compare
ABIE51_RS10915 +0.2 1.8 TonB-dependent receptor compare
ABIE51_RS12310 +0.2 1.4 response regulator transcription factor compare
ABIE51_RS14545 +0.2 1.5 Arc family DNA binding domain-containing protein compare
ABIE51_RS02430 +0.2 1.3 LysR family transcriptional regulator compare
ABIE51_RS17930 +0.2 1.2 alpha/beta fold hydrolase compare
ABIE51_RS02605 +0.2 1.4 EF-hand domain-containing protein compare
ABIE51_RS03750 +0.2 0.8 ligase-associated DNA damage response exonuclease compare
ABIE51_RS06210 +0.2 1.3 hypothetical protein compare
ABIE51_RS16865 +0.2 1.7 RNA polymerase sigma factor FliA compare
ABIE51_RS17995 +0.2 1.5 GAF domain-containing protein compare
ABIE51_RS15405 +0.2 0.9 carboxylating nicotinate-nucleotide diphosphorylase compare
ABIE51_RS11800 +0.2 1.6 RluA family pseudouridine synthase compare
ABIE51_RS03800 +0.2 0.9 hypothetical protein compare
ABIE51_RS11530 +0.2 0.8 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
ABIE51_RS00215 +0.2 1.1 pseudouridine synthase compare
ABIE51_RS17635 +0.2 0.8 O-antigen ligase compare
ABIE51_RS12995 +0.2 1.0 DUF3228 family protein compare
ABIE51_RS05570 +0.2 1.5 hypothetical protein compare
ABIE51_RS14005 +0.2 0.6 histidine triad nucleotide-binding protein compare
ABIE51_RS06325 +0.2 1.0 alpha/beta hydrolase compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in agar plate interaction control experiments