Experiment set2IT092 for Pseudomonas fluorescens FW300-N2C3

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
AO356_09525 -5.9 -4.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_14430 -5.9 -8.1 anthranilate synthase compare
AO356_21440 -5.9 -7.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_08635 -5.6 -7.7 ATP phosphoribosyltransferase regulatory subunit compare
AO356_13410 -5.5 -8.4 homoserine O-acetyltransferase compare
AO356_14435 -5.4 -5.3 anthranilate phosphoribosyltransferase compare
AO356_13405 -5.4 -9.0 methionine biosynthesis protein MetW compare
AO356_21405 -5.4 -5.2 3-isopropylmalate dehydratase compare
AO356_14440 -5.3 -5.2 indole-3-glycerol-phosphate synthase compare
AO356_00555 -5.3 -10.8 sulfite reductase compare
AO356_18275 -5.1 -11.4 ornithine carbamoyltransferase compare
AO356_22200 -5.1 -7.0 sirohydrochlorin ferrochelatase compare
AO356_18325 -5.1 -11.8 argininosuccinate synthase compare
AO356_09425 -5.1 -3.5 malate dehydrogenase compare
AO356_16175 -5.1 -5.0 acetolactate synthase 3 regulatory subunit compare
AO356_09815 -5.0 -6.0 imidazoleglycerol-phosphate dehydratase compare
AO356_06965 -5.0 -6.9 histidinol dehydrogenase compare
AO356_10915 -5.0 -10.1 tryptophan synthase subunit beta compare
AO356_06960 -4.9 -7.5 histidinol-phosphate aminotransferase compare
AO356_19090 -4.9 -3.4 phosphoribosylaminoimidazole synthetase compare
AO356_14420 -4.9 -14.4 anthranilate synthase compare
AO356_19085 -4.9 -7.4 phosphoribosylglycinamide formyltransferase compare
AO356_12525 -4.9 -9.8 acetylglutamate kinase compare
AO356_09520 -4.8 -4.7 phosphoribosyl-AMP cyclohydrolase compare
AO356_09810 -4.8 -4.6 imidazole glycerol phosphate synthase subunit HisH compare
AO356_10300 -4.8 -8.5 3-phosphoglycerate dehydrogenase compare
AO356_13085 -4.7 -10.0 N-acetylglutamate synthase compare
AO356_16180 -4.6 -14.8 ketol-acid reductoisomerase compare
AO356_21415 -4.6 -9.4 3-isopropylmalate dehydrogenase compare
AO356_21400 -4.6 -7.6 isopropylmalate isomerase compare
AO356_02265 -4.5 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_09800 -4.5 -5.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_06970 -4.5 -7.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_13605 -4.4 -6.1 5,10-methylenetetrahydrofolate reductase compare
AO356_10910 -4.3 -9.7 tryptophan synthase subunit alpha compare
AO356_21470 -4.3 -7.3 O-succinylhomoserine sulfhydrylase compare
AO356_12520 -4.3 -3.0 orotate phosphoribosyltransferase compare
AO356_13250 -4.3 -10.8 dihydroxy-acid dehydratase compare
AO356_16170 -4.3 -9.6 acetolactate synthase 3 catalytic subunit compare
AO356_10340 -4.3 -14.2 phosphoserine phosphatase compare
AO356_21465 -4.2 -5.0 amidophosphoribosyltransferase compare
AO356_00560 -4.1 -2.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_08735 -4.1 -14.3 phosphoserine phosphatase compare
AO356_06550 -4.1 -10.7 2-isopropylmalate synthase compare
AO356_20830 -3.6 -4.9 phosphoadenosine phosphosulfate reductase compare
AO356_07910 -3.5 -2.4 exodeoxyribonuclease V subunit alpha compare
AO356_19795 -3.4 -4.0 glycerol-3-phosphate dehydrogenase compare
AO356_09795 -3.4 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
AO356_12780 -3.3 -7.3 argininosuccinate lyase compare
AO356_17520 -3.2 -2.2 phosphoribosylformylglycinamidine synthase compare
AO356_15165 -3.2 -3.7 protein cII compare
AO356_21330 -3.0 -9.4 aromatic amino acid aminotransferase compare
AO356_06385 -2.9 -4.8 recombinase XerD compare
AO356_13685 -2.8 -3.9 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_11315 -2.8 -1.9 shikimate dehydrogenase compare
AO356_03180 -2.8 -5.0 CysB family transcriptional regulator compare
AO356_16665 -2.7 -12.0 sulfate adenylyltransferase compare
AO356_16600 -2.6 -3.1 malate:quinone oxidoreductase compare
AO356_27180 -2.6 -5.4 hypothetical protein compare
AO356_01750 -2.6 -4.5 ATP-dependent Clp protease proteolytic subunit compare
AO356_16075 -2.5 -5.2 Fis family transcriptional regulator compare
AO356_17075 -2.4 -3.3 cytochrome C compare
AO356_17070 -2.4 -3.2 cytochrome B compare
AO356_16670 -2.4 -10.1 adenylylsulfate kinase compare
AO356_19425 -2.2 -2.6 lipid A biosynthesis lauroyl acyltransferase compare
AO356_12380 -2.1 -8.0 ATP-dependent DNA helicase RecG compare
AO356_11450 -2.0 -2.7 cytochrome C compare
AO356_20175 -2.0 -2.6 3-oxoacyl-ACP synthase compare
AO356_27215 -2.0 -3.9 hypothetical protein compare
AO356_21410 -2.0 -2.6 SAM-dependent methyltransferase compare
AO356_01745 -2.0 -5.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_19420 -1.9 -2.8 septum formation inhibitor compare
AO356_10140 -1.9 -7.9 phosphoenolpyruvate carboxykinase [ATP] compare
AO356_08235 -1.9 -8.1 histidine kinase compare
AO356_03800 -1.9 -2.8 histidine kinase compare
AO356_14135 -1.8 -12.0 biotin synthase compare
AO356_06690 -1.8 -3.7 queuine tRNA-ribosyltransferase compare
AO356_05670 -1.8 -3.4 recombinase RecA compare
AO356_19170 -1.7 -4.9 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO356_02465 -1.7 -2.6 carbonate dehydratase compare
AO356_18025 -1.7 -3.0 ATP-dependent DNA helicase RuvB compare
AO356_02825 -1.7 -10.0 phosphoenolpyruvate synthase conserved
AO356_03070 -1.6 -9.8 histidine kinase compare
AO356_10330 -1.6 -11.2 threonine dehydratase compare
AO356_08275 -1.6 -4.3 precorrin isomerase compare
AO356_02410 -1.6 -5.3 cytochrome C oxidase Cbb3 compare
AO356_19050 -1.6 -2.2 cysteine synthase compare
AO356_20155 -1.6 -6.3 phosphate acyltransferase compare
AO356_27210 -1.6 -7.9 hypothetical protein compare
AO356_05630 -1.5 -3.3 LysR family transcriptional regulator compare
AO356_07915 -1.5 -3.0 exodeoxyribonuclease V subunit beta compare
AO356_17950 -1.5 -7.5 histidine kinase compare
AO356_12725 -1.4 -3.7 recombinase XerC compare
AO356_18730 -1.3 -6.7 arginine N-succinyltransferase compare
AO356_18020 -1.3 -3.0 ATP-dependent DNA helicase RuvA compare
AO356_16050 -1.3 -3.0 glucose-6-phosphate isomerase compare
AO356_24550 -1.3 -2.2 hypothetical protein compare
AO356_12735 -1.3 -2.1 diaminopimelate epimerase compare
AO356_02315 -1.3 -3.0 DNA topoisomerase I compare
AO356_27170 -1.3 -3.4 XRE family transcriptional regulator compare
AO356_22795 -1.3 -3.3 UTP--glucose-1-phosphate uridylyltransferase compare
AO356_17035 -1.3 -5.0 ATPase compare
AO356_07480 -1.3 -2.5 carbamoyl phosphate synthase large subunit compare
AO356_07370 -1.2 -3.4 nicotinate-nucleotide pyrophosphorylase compare
AO356_02290 -1.2 -2.6 TetR family transcriptional regulator compare
AO356_24845 -1.2 -2.9 ATPase compare
AO356_06150 -1.2 -3.3 energy transducer TonB compare
AO356_08290 -1.2 -3.0 precorrin-6Y C5,15-methyltransferase compare
AO356_21125 -1.2 -3.9 cyclic peptide transporter compare
AO356_19175 -1.2 -3.1 alpha-ribazole phosphatase compare
AO356_08300 -1.2 -3.7 cobalt-precorrin-6X reductase compare
AO356_12375 -1.2 -7.0 histidine kinase compare
AO356_16435 -1.2 -2.1 hypothetical protein compare
AO356_02485 -1.2 -3.0 transcriptional regulator compare
AO356_02405 -1.2 -7.3 cytochrome C oxidase Cbb3 compare
AO356_11085 -1.2 -5.3 LysR family transcriptional regulator compare
AO356_08875 -1.2 -2.2 toluene tolerance protein compare
AO356_14295 -1.2 -1.6 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO356_19515 -1.2 -1.6 hypothetical protein compare
AO356_00355 -1.2 -5.9 chemotaxis protein CheY compare
AO356_11090 -1.1 -2.9 aspartate ammonia-lyase compare
AO356_03095 -1.1 -4.9 protease HtpX compare
AO356_01270 -1.1 -5.2 (Fe-S)-binding protein compare
AO356_26455 -1.1 -2.2 hypothetical protein compare
AO356_03405 -1.1 -3.3 serine acetyltransferase compare
AO356_07000 -1.1 -1.8 ABC transporter permease compare
AO356_09540 -1.1 -1.4 twin-arginine protein translocation system subunit TatC compare
AO356_22675 -1.1 -1.8 sulfate transporter compare
AO356_02420 -1.1 -4.7 cytochrome C oxidase Cbb3 compare
AO356_08640 -1.1 -3.4 membrane protease HflC compare
AO356_15260 -1.1 -1.3 dehydratase compare
AO356_26475 -1.1 -2.3 lactoylglutathione lyase compare
AO356_19045 -1.0 -7.0 chemotaxis protein CheY compare
AO356_03620 -1.0 -1.9 cytochrome C compare
AO356_07540 -1.0 -1.8 SsrA-binding protein compare
AO356_08585 -1.0 -2.6 50S ribosomal protein L9 compare
AO356_12450 -1.0 -4.9 hypothetical protein compare
AO356_14540 -1.0 -1.1 biotin--protein ligase compare
AO356_05615 -1.0 -3.1 hypothetical protein compare
AO356_04550 -1.0 -2.4 response regulator SirA compare
AO356_03010 -1.0 -2.2 glutaredoxin compare
AO356_19140 -1.0 -6.2 cobyrinic acid a,c-diamide synthase compare
AO356_08270 -1.0 -6.0 precorrin-2 C20-methyltransferase compare
AO356_25750 -1.0 -1.8 GntR family transcriptional regulator compare
AO356_06660 -0.9 -3.3 RNA methyltransferase compare
AO356_16070 -0.9 -3.6 poly(A) polymerase compare
AO356_06575 -0.9 -2.2 outer membrane protein assembly factor BamB compare
AO356_01275 -0.9 -3.9 GntR family transcriptional regulator compare
AO356_08895 -0.9 -1.6 GlcNAc-PI de-N-acetylase compare
AO356_27230 -0.9 -3.2 hypothetical protein compare
AO356_16505 -0.9 -2.3 molybdopterin-synthase adenylyltransferase compare
AO356_24245 -0.9 -1.7 siderophore-iron reductase FhuF compare
AO356_11025 -0.9 -3.2 transcriptional regulator PhoU compare
AO356_19180 -0.9 -3.6 cobalamin synthase compare
AO356_16060 -0.9 -3.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
AO356_08280 -0.9 -2.8 oxidoreductase compare
AO356_08265 -0.9 -3.4 precorrin-3B C17-methyltransferase compare
AO356_19135 -0.9 -2.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO356_03500 -0.9 -2.7 3-oxoacyl-ACP reductase compare
AO356_12640 -0.9 -1.7 cytochrome C compare
AO356_14335 -0.9 -2.7 rRNA methyltransferase compare
AO356_03455 -0.9 -2.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO356_25645 -0.9 -3.5 ABC transporter substrate-binding protein compare
AO356_08755 -0.9 -1.8 aspartyl protease compare
AO356_18775 -0.9 -2.3 aspartate kinase compare
AO356_23645 -0.8 -1.6 hypothetical protein compare
AO356_26190 -0.8 -2.8 NAD(P)H dehydrogenase compare
AO356_08470 -0.8 -6.5 N-acylglucosamine 2-epimerase compare
AO356_00505 -0.8 -4.9 cobalamin biosynthesis protein CobN compare
AO356_00920 -0.8 -1.3 cold-shock protein compare
AO356_19155 -0.8 -3.9 threonine-phosphate decarboxylase compare
AO356_10170 -0.8 -1.7 chemotaxis protein CheY compare
AO356_19165 -0.8 -2.2 adenosylcobinamide kinase compare
AO356_26630 -0.8 -1.6 XshC-Cox1 family protein compare
AO356_19160 -0.8 -4.0 cobyric acid synthase compare
AO356_04420 -0.8 -2.4 ribonuclease D compare
AO356_27245 -0.8 -0.8 hypothetical protein compare
AO356_00500 -0.8 -2.0 magnesium chelatase compare
AO356_29795 -0.8 -1.5 amino acid transporter compare
AO356_22920 -0.8 -2.4 nicotinamidase compare
AO356_04205 -0.8 -2.2 hypothetical protein compare
AO356_17985 -0.8 -2.6 cold-shock protein compare
AO356_27205 -0.8 -3.1 hypothetical protein compare
AO356_13455 -0.8 -2.2 uracil phosphoribosyltransferase compare
AO356_03400 -0.7 -3.3 aminotransferase DegT compare
AO356_11635 -0.7 -4.8 recombinase RecF compare
AO356_14790 -0.7 -4.0 MFS transporter compare
AO356_08925 -0.7 -3.5 lipopolysaccharide kinase compare
AO356_08905 -0.7 -1.6 glycosyl transferase compare
AO356_07110 -0.7 -3.1 ribonuclease G compare
AO356_00605 -0.7 -2.5 TetR family transcriptional regulator compare
AO356_13505 -0.7 -1.2 chemotaxis protein compare
AO356_06995 -0.7 -2.9 outer membrane lipid asymmetry maintenance protein MlaD compare
AO356_05135 -0.7 -1.8 aldehyde dehydrogenase compare
AO356_07210 -0.7 -1.5 histidine kinase compare
AO356_10585 -0.7 -5.1 hypothetical protein compare
AO356_18330 -0.7 -3.0 hypothetical protein compare
AO356_26095 -0.7 -1.6 Rieske (2Fe-2S) protein compare
AO356_25090 -0.7 -2.1 hypothetical protein compare
AO356_17485 -0.7 -2.6 elongation factor 4 compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas fluorescens FW300-N2C3

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms