Experiment set2IT090 for Pantoea sp. MT58

Compare to:

Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic

200 most important genes:

  gene name fitness t score description  
IAI47_15635 -7.2 -5.0 RNA polymerase-binding protein DksA compare
IAI47_04895 -5.6 -3.8 pyridoxine 5'-phosphate synthase compare
IAI47_13690 -5.2 -1.8 cell envelope integrity protein TolA compare
IAI47_13685 -5.1 -4.2 Tol-Pal system protein TolB compare
IAI47_13695 -4.8 -1.7 colicin uptake protein TolR compare
IAI47_16205 -4.5 -12.1 threonine synthase compare
IAI47_07165 -4.4 -3.1 exodeoxyribonuclease I compare
IAI47_17220 -4.4 -30.6 glutamate synthase large subunit compare
IAI47_09190 -4.4 -16.6 anthranilate synthase component 1 compare
IAI47_17965 -4.2 -14.9 glucose-6-phosphate isomerase compare
IAI47_13770 -4.2 -12.1 citrate synthase compare
IAI47_10520 -4.2 -4.1 pyridoxamine 5'-phosphate oxidase compare
IAI47_00895 -4.2 -22.1 phosphoenolpyruvate carboxylase compare
IAI47_04120 -4.2 -21.9 GTP diphosphokinase compare
IAI47_07085 -4.1 -17.6 histidinol-phosphate transaminase compare
IAI47_17225 -4.1 -19.0 sulfite reductase subunit alpha compare
IAI47_11450 -4.0 -10.3 ankyrin repeat domain-containing protein compare
IAI47_09040 -3.9 -3.5 NAD-dependent epimerase compare
IAI47_07060 -3.9 -13.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_12215 -3.9 -15.1 dihydroorotase compare
IAI47_12705 -3.9 -16.4 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_09185 -3.8 -6.9 glutamine amidotransferase compare
IAI47_09180 -3.8 -16.0 anthranilate phosphoribosyltransferase compare
IAI47_17185 -3.8 -8.4 RNA polymerase factor sigma-54 compare
IAI47_05180 -3.8 -16.2 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_09275 -3.7 -11.2 orotidine-5'-phosphate decarboxylase compare
IAI47_10320 -3.7 -2.4 Rrf2 family transcriptional regulator compare
IAI47_09580 -3.7 -5.3 FNR family transcription factor compare
IAI47_09175 -3.7 -15.3 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_03860 -3.7 -15.0 diaminopimelate decarboxylase compare
IAI47_04930 -3.6 -20.2 phosphoribosylformylglycinamidine synthase compare
IAI47_09165 -3.6 -11.7 tryptophan synthase subunit alpha compare
IAI47_00460 -3.6 -2.5 glutamate--ammonia ligase compare
IAI47_07065 -3.6 -12.8 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_07075 -3.6 -11.9 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_16080 -3.6 -10.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_16830 -3.6 -14.8 ornithine carbamoyltransferase compare
IAI47_18045 -3.6 -12.7 phosphoribosylamine--glycine ligase compare
IAI47_05275 -3.6 -6.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_18040 -3.5 -16.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_00300 -3.5 -2.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_07090 -3.5 -11.1 histidinol dehydrogenase compare
IAI47_00780 -3.5 -4.1 6-phosphofructokinase compare
IAI47_01050 -3.4 -18.2 ketol-acid reductoisomerase compare
IAI47_18830 -3.4 -2.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_00905 -3.4 -10.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_00920 -3.4 -15.1 argininosuccinate lyase compare
IAI47_00735 -3.4 -3.3 protein-export chaperone SecB compare
IAI47_16350 -3.4 -10.6 phosphoserine phosphatase compare
IAI47_05425 -3.3 -6.0 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_16115 -3.3 -20.0 carbamoyl-phosphate synthase large subunit compare
IAI47_06275 -3.3 -17.0 amidophosphoribosyltransferase compare
IAI47_05440 -3.3 -12.6 cysteine synthase A compare
IAI47_06235 -3.3 -9.4 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_08085 -3.3 -6.8 helix-turn-helix domain-containing protein compare
IAI47_07070 -3.2 -7.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_13900 -3.2 -16.2 asparagine synthase B compare
IAI47_01035 -3.2 -16.8 dihydroxy-acid dehydratase compare
IAI47_00915 -3.2 -14.2 argininosuccinate synthase compare
IAI47_11475 -3.1 -1.3 hypothetical protein compare
IAI47_07080 -3.1 -10.6 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_01365 -3.1 -2.1 inorganic phosphate transporter PitA compare
IAI47_14350 -3.0 -7.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_12880 -3.0 -17.7 formate C-acetyltransferase compare
IAI47_09240 -3.0 -2.9 HTH-type transcriptional regulator CysB compare
IAI47_12865 -3.0 -13.4 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_01040 -3.0 -10.6 threonine ammonia-lyase, biosynthetic compare
IAI47_16005 -3.0 -10.9 3-isopropylmalate dehydrogenase compare
IAI47_18015 -3.0 -14.7 homoserine O-succinyltransferase compare
IAI47_12645 -3.0 -7.1 porin OmpA compare
IAI47_09170 -3.0 -14.3 tryptophan synthase subunit beta compare
IAI47_00465 -2.9 -2.0 ribosome-dependent GTPase TypA compare
IAI47_00890 -2.9 -11.6 methylenetetrahydrofolate reductase compare
IAI47_13485 -2.9 -7.1 cyclic pyranopterin monophosphate synthase MoaC compare
IAI47_03725 -2.9 -7.4 phosphoglycerate dehydrogenase compare
IAI47_00910 -2.9 -9.1 acetylglutamate kinase compare
IAI47_12885 -2.9 -9.6 pyruvate formate lyase 1-activating protein compare
IAI47_03975 -2.9 -13.5 amino-acid N-acetyltransferase compare
IAI47_16210 -2.9 -10.8 homoserine kinase compare
IAI47_14945 -2.8 -4.3 pyrroline-5-carboxylate reductase compare
IAI47_01030 -2.8 -12.0 branched-chain amino acid transaminase compare
IAI47_16015 -2.8 -5.9 3-isopropylmalate dehydratase small subunit compare
IAI47_15115 -2.8 -10.6 glutamate-5-semialdehyde dehydrogenase compare
IAI47_16010 -2.8 -13.1 3-isopropylmalate dehydratase large subunit compare
IAI47_04865 -2.8 -2.2 SoxR-reducing system protein RseC compare
IAI47_12915 -2.7 -9.6 leucine-responsive transcriptional regulator Lrp compare
IAI47_00880 -2.7 -12.2 cystathionine gamma-synthase compare
IAI47_16860 -2.7 -10.9 aspartate carbamoyltransferase compare
IAI47_09055 -2.6 -12.9 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
IAI47_16120 -2.6 -9.8 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_00600 -2.6 -9.5 orotate phosphoribosyltransferase compare
IAI47_16000 -2.5 -13.0 2-isopropylmalate synthase compare
IAI47_07095 -2.5 -7.8 ATP phosphoribosyltransferase compare
IAI47_14355 -2.4 -9.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_15120 -2.4 -7.5 glutamate 5-kinase compare
IAI47_13140 -2.4 -9.1 molybdopterin molybdotransferase MoeA compare
IAI47_16215 -2.4 -13.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_18530 -2.4 -2.2 thioredoxin TrxA compare
IAI47_17005 -2.3 -9.3 polyribonucleotide nucleotidyltransferase compare
IAI47_17560 -2.3 -1.9 ROK family transcriptional regulator compare
IAI47_15110 -2.2 -5.5 chromophore lyase compare
IAI47_13495 -2.2 -5.6 GTP 3',8-cyclase MoaA compare
IAI47_06325 -2.2 -7.4 acetate kinase compare
IAI47_18400 -2.2 -3.3 tyrosine recombinase XerC compare
IAI47_05325 -2.2 -3.9 DUF1471 domain-containing protein compare
IAI47_13475 -2.1 -4.1 molybdopterin synthase catalytic subunit MoaE compare
IAI47_09305 -2.1 -4.0 cyclic di-GMP phosphodiesterase compare
IAI47_04410 -2.1 -11.0 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_15540 -2.1 -9.7 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_06980 -2.1 -3.2 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_04260 -2.0 -12.5 nitrate reductase subunit beta compare
IAI47_13480 -2.0 -2.4 molybdopterin synthase sulfur carrier subunit compare
IAI47_16190 -1.9 -4.2 molybdopterin adenylyltransferase compare
IAI47_15970 -1.9 -2.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
IAI47_00455 -1.9 -7.4 nitrogen regulation protein NR(II) compare
IAI47_09010 -1.9 -6.5 formyltetrahydrofolate deformylase compare
IAI47_06320 -1.9 -6.9 phosphate acetyltransferase compare
IAI47_04265 -1.9 -8.3 nitrate reductase molybdenum cofactor assembly chaperone compare
IAI47_00655 -1.9 -6.2 glycosyltransferase family 4 protein compare
IAI47_16870 -1.8 -4.7 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_04255 -1.8 -13.5 nitrate reductase subunit alpha compare
IAI47_00870 -1.8 -1.3 50S ribosomal protein L31 compare
IAI47_00410 -1.8 -9.3 molybdenum cofactor guanylyltransferase MobA compare
IAI47_11655 -1.8 -3.9 hypothetical protein compare
IAI47_06380 -1.7 -3.0 NADH-quinone oxidoreductase subunit NuoF compare
IAI47_16995 -1.7 -2.4 protein YrbN compare
IAI47_13145 -1.7 -7.7 molybdopterin-synthase adenylyltransferase MoeB compare
IAI47_17020 -1.7 -3.0 30S ribosome-binding factor RbfA compare
IAI47_00445 -1.7 -8.2 oxygen-independent coproporphyrinogen III oxidase compare
IAI47_04270 -1.7 -7.5 respiratory nitrate reductase subunit gamma compare
IAI47_12030 -1.7 -9.9 PTS glucose transporter subunit IIBC compare
IAI47_04835 -1.6 -6.8 ATP-dependent RNA helicase SrmB compare
IAI47_13885 -1.6 -1.8 N-acetylglucosamine-6-phosphate deacetylase compare
IAI47_10840 -1.6 -4.8 pyruvate kinase PykF compare
IAI47_04160 -1.6 -8.9 phosphoadenylyl-sulfate reductase compare
IAI47_05070 -1.5 -1.1 outer membrane protein assembly factor BamB compare
IAI47_06245 -1.5 -3.2 tRNA pseudouridine(38-40) synthase TruA compare
IAI47_15605 -1.4 -2.0 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
IAI47_12790 -1.4 -0.8 chromosome partition protein MukE compare
IAI47_18410 -1.4 -3.1 diaminopimelate epimerase compare
IAI47_07930 -1.4 -1.2 DUF2158 domain-containing protein compare
IAI47_11310 -1.4 -3.1 redox-regulated ATPase YchF compare
IAI47_11415 -1.3 -1.2 hypothetical protein compare
IAI47_03595 -1.3 -4.4 YggS family pyridoxal phosphate-dependent enzyme compare
IAI47_03375 -1.3 -6.8 peptide chain release factor 3 compare
IAI47_11420 -1.3 -2.5 hypothetical protein compare
IAI47_04350 -1.3 -8.8 glutamate--cysteine ligase compare
IAI47_13310 -1.3 -4.6 MerR family transcriptional regulator compare
IAI47_00875 -1.3 -1.1 met regulon transcriptional regulator MetJ compare
IAI47_15895 -1.3 -1.6 secA regulator SecM compare
IAI47_12875 -1.3 -6.3 formate transporter FocA compare
IAI47_17120 -1.2 -1.9 BolA family iron metabolism protein IbaG compare
IAI47_12275 -1.2 -9.3 glucans biosynthesis glucosyltransferase MdoH compare
IAI47_16085 -1.2 -1.6 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
IAI47_03820 -1.2 -2.9 site-specific tyrosine recombinase XerD compare
IAI47_21035 -1.1 -2.5 TetR/AcrR family transcriptional regulator compare
IAI47_08355 -1.1 -2.1 flagellar protein FlhE compare
IAI47_18315 -1.1 -3.2 HTH-type transcriptional regulator MetR compare
IAI47_02695 -1.1 -5.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_18310 -1.1 -7.8 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
IAI47_01005 -1.1 -6.9 DUF413 domain-containing protein compare
IAI47_05155 -1.1 -7.8 polyphosphate kinase 1 compare
IAI47_19035 -1.0 -1.6 transcriptional regulator compare
IAI47_06370 -1.0 -3.4 NADH-quinone oxidoreductase subunit C/D compare
IAI47_14400 -1.0 -6.4 copper-exporting P-type ATPase CopA compare
IAI47_01000 -1.0 -7.6 HTH-type transcriptional regulator HdfR compare
IAI47_06120 -1.0 -2.4 YfcZ/YiiS family protein compare
IAI47_01955 -1.0 -5.8 aspartate aminotransferase family protein compare
IAI47_15595 -1.0 -2.0 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_07485 -1.0 -2.0 DUF4756 family protein compare
IAI47_11735 -1.0 -2.0 histidinol-phosphatase compare
IAI47_13935 -1.0 -1.2 tRNA-Gln compare
IAI47_13180 -1.0 -4.1 manganese-binding transcriptional regulator MntR compare
IAI47_00450 -1.0 -6.5 nitrogen regulation protein NR(I) compare
IAI47_04870 -1.0 -3.2 elongation factor 4 compare
IAI47_01180 -1.0 -1.4 prolyl oligopeptidase family serine peptidase compare
IAI47_04245 -1.0 -5.3 two-component system response regulator NarL compare
IAI47_18435 -1.0 -7.0 uroporphyrinogen-III C-methyltransferase compare
IAI47_21830 -1.0 -1.1 hypothetical protein compare
IAI47_21450 -1.0 -0.9 general stress protein compare
IAI47_04155 -0.9 -5.8 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_02040 -0.9 -4.7 peptidylprolyl isomerase compare
IAI47_09210 -0.9 -4.3 23S rRNA pseudouridine(2605) synthase RluB compare
IAI47_19710 -0.9 -1.9 helix-turn-helix transcriptional regulator compare
IAI47_11935 -0.9 -7.4 two-component system sensor histidine kinase PhoQ compare
IAI47_13840 -0.9 -2.2 replication initiation negative regulator SeqA compare
IAI47_11870 -0.9 -2.9 DUF2767 family protein compare
IAI47_00540 -0.9 -1.8 hypothetical protein compare
IAI47_03855 -0.9 -3.5 LysR family transcriptional regulator compare
IAI47_10890 -0.9 -6.9 FAD-binding oxidoreductase compare
IAI47_07175 -0.9 -5.2 FUSC family protein compare
IAI47_05520 -0.9 -0.9 tRNA-Ala compare
IAI47_12110 -0.9 -2.0 ribonuclease E compare
IAI47_02090 -0.9 -2.0 elongation factor Tu compare
IAI47_21015 -0.9 -3.4 helix-turn-helix transcriptional regulator compare
IAI47_09245 -0.9 -3.0 YmiA family putative membrane protein compare
IAI47_18055 -0.9 -2.5 DNA-binding protein HU-alpha compare
IAI47_21235 -0.8 -1.7 hypothetical protein compare
IAI47_04150 -0.8 -5.5 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_18715 -0.8 -0.9 YibL family ribosome-associated protein compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Aluminum potassium sulfate dodecahydrate across organisms