Experiment set2IT088 for Pantoea sp. MT58

Compare to:

Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic

200 most important genes:

  gene name fitness t score description  
IAI47_13685 -5.1 -4.0 Tol-Pal system protein TolB compare
IAI47_11415 -5.0 -3.4 hypothetical protein compare
IAI47_15635 -5.0 -4.8 RNA polymerase-binding protein DksA compare
IAI47_13695 -4.8 -1.8 colicin uptake protein TolR compare
IAI47_08445 -4.8 -2.8 Holliday junction branch migration protein RuvA compare
IAI47_17965 -4.7 -19.7 glucose-6-phosphate isomerase compare
IAI47_17225 -4.6 -22.6 sulfite reductase subunit alpha compare
IAI47_16205 -4.4 -12.0 threonine synthase compare
IAI47_06235 -4.3 -10.1 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_17220 -4.3 -30.2 glutamate synthase large subunit compare
IAI47_09580 -4.3 -5.8 FNR family transcription factor compare
IAI47_14350 -4.0 -10.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_17185 -4.0 -7.2 RNA polymerase factor sigma-54 compare
IAI47_13770 -4.0 -13.6 citrate synthase compare
IAI47_03860 -4.0 -15.2 diaminopimelate decarboxylase compare
IAI47_00895 -3.9 -21.6 phosphoenolpyruvate carboxylase compare
IAI47_09180 -3.9 -16.5 anthranilate phosphoribosyltransferase compare
IAI47_10520 -3.9 -4.6 pyridoxamine 5'-phosphate oxidase compare
IAI47_09185 -3.9 -6.0 glutamine amidotransferase compare
IAI47_21880 -3.8 -1.4 ParA family protein compare
IAI47_07090 -3.8 -12.3 histidinol dehydrogenase compare
IAI47_16995 -3.8 -4.4 protein YrbN compare
IAI47_07085 -3.8 -16.4 histidinol-phosphate transaminase compare
IAI47_00780 -3.8 -3.6 6-phosphofructokinase compare
IAI47_18045 -3.7 -14.8 phosphoribosylamine--glycine ligase compare
IAI47_04120 -3.7 -19.9 GTP diphosphokinase compare
IAI47_09190 -3.7 -14.1 anthranilate synthase component 1 compare
IAI47_12215 -3.7 -14.2 dihydroorotase compare
IAI47_12705 -3.6 -15.3 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_11450 -3.6 -9.9 ankyrin repeat domain-containing protein compare
IAI47_07060 -3.6 -11.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_15120 -3.6 -10.0 glutamate 5-kinase compare
IAI47_16350 -3.5 -12.3 phosphoserine phosphatase compare
IAI47_01040 -3.5 -12.4 threonine ammonia-lyase, biosynthetic compare
IAI47_07075 -3.5 -10.8 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_17900 -3.5 -2.0 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
IAI47_18830 -3.4 -2.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_04930 -3.4 -19.0 phosphoribosylformylglycinamidine synthase compare
IAI47_00910 -3.3 -10.6 acetylglutamate kinase compare
IAI47_18040 -3.3 -16.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_07080 -3.3 -10.9 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_15115 -3.3 -13.4 glutamate-5-semialdehyde dehydrogenase compare
IAI47_09175 -3.2 -14.7 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_00915 -3.2 -14.5 argininosuccinate synthase compare
IAI47_05275 -3.2 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_09240 -3.2 -3.7 HTH-type transcriptional regulator CysB compare
IAI47_12865 -3.2 -13.4 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_09275 -3.2 -8.2 orotidine-5'-phosphate decarboxylase compare
IAI47_05425 -3.1 -6.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_09165 -3.1 -11.4 tryptophan synthase subunit alpha compare
IAI47_16080 -3.1 -11.5 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_01050 -3.1 -16.4 ketol-acid reductoisomerase compare
IAI47_12645 -3.1 -8.2 porin OmpA compare
IAI47_01365 -3.1 -2.1 inorganic phosphate transporter PitA compare
IAI47_00600 -3.1 -9.7 orotate phosphoribosyltransferase compare
IAI47_01035 -3.0 -17.1 dihydroxy-acid dehydratase compare
IAI47_07065 -3.0 -12.4 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_03725 -3.0 -7.7 phosphoglycerate dehydrogenase compare
IAI47_14945 -3.0 -4.5 pyrroline-5-carboxylate reductase compare
IAI47_05440 -2.9 -11.0 cysteine synthase A compare
IAI47_16860 -2.9 -12.6 aspartate carbamoyltransferase compare
IAI47_06940 -2.9 -1.0 tyrosine-protein kinase Wzc compare
IAI47_12880 -2.9 -18.1 formate C-acetyltransferase compare
IAI47_01030 -2.9 -14.9 branched-chain amino acid transaminase compare
IAI47_07165 -2.9 -3.3 exodeoxyribonuclease I compare
IAI47_03975 -2.9 -14.2 amino-acid N-acetyltransferase compare
IAI47_00920 -2.9 -13.1 argininosuccinate lyase compare
IAI47_16830 -2.8 -13.7 ornithine carbamoyltransferase compare
IAI47_05180 -2.8 -12.1 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_09170 -2.8 -13.6 tryptophan synthase subunit beta compare
IAI47_00460 -2.8 -2.7 glutamate--ammonia ligase compare
IAI47_18015 -2.8 -13.6 homoserine O-succinyltransferase compare
IAI47_00890 -2.8 -10.0 methylenetetrahydrofolate reductase compare
IAI47_16115 -2.8 -17.6 carbamoyl-phosphate synthase large subunit compare
IAI47_06275 -2.7 -15.2 amidophosphoribosyltransferase compare
IAI47_00880 -2.7 -11.9 cystathionine gamma-synthase compare
IAI47_06980 -2.7 -4.6 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_07070 -2.7 -7.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_16120 -2.6 -9.7 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_00905 -2.6 -10.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_13900 -2.6 -14.4 asparagine synthase B compare
IAI47_16210 -2.6 -10.0 homoserine kinase compare
IAI47_15110 -2.5 -7.6 chromophore lyase compare
IAI47_16010 -2.5 -12.6 3-isopropylmalate dehydratase large subunit compare
IAI47_00465 -2.5 -5.0 ribosome-dependent GTPase TypA compare
IAI47_11760 -2.4 -2.1 TonB-dependent siderophore receptor compare
IAI47_16000 -2.4 -13.4 2-isopropylmalate synthase compare
IAI47_09055 -2.4 -12.3 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
IAI47_09360 -2.4 -1.9 peptide ABC transporter ATP-binding protein SapF compare
IAI47_12915 -2.3 -9.4 leucine-responsive transcriptional regulator Lrp compare
IAI47_16015 -2.3 -4.8 3-isopropylmalate dehydratase small subunit compare
IAI47_16870 -2.3 -6.4 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_07095 -2.3 -8.5 ATP phosphoribosyltransferase compare
IAI47_17120 -2.2 -2.6 BolA family iron metabolism protein IbaG compare
IAI47_18400 -2.2 -2.6 tyrosine recombinase XerC compare
IAI47_04895 -2.2 -4.1 pyridoxine 5'-phosphate synthase compare
IAI47_08440 -2.2 -3.1 crossover junction endodeoxyribonuclease RuvC compare
IAI47_18145 -2.2 -2.7 elongation factor Tu compare
IAI47_09010 -2.1 -7.4 formyltetrahydrofolate deformylase compare
IAI47_00300 -2.1 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_12885 -2.1 -8.7 pyruvate formate lyase 1-activating protein compare
IAI47_16215 -2.1 -12.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_03820 -2.1 -5.5 site-specific tyrosine recombinase XerD compare
IAI47_16005 -2.0 -8.7 3-isopropylmalate dehydrogenase compare
IAI47_14355 -2.0 -8.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_04410 -2.0 -10.6 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_04160 -1.9 -9.5 phosphoadenylyl-sulfate reductase compare
IAI47_00655 -1.9 -6.4 glycosyltransferase family 4 protein compare
IAI47_18530 -1.9 -2.3 thioredoxin TrxA compare
IAI47_06325 -1.9 -6.4 acetate kinase compare
IAI47_06320 -1.9 -6.8 phosphate acetyltransferase compare
IAI47_13700 -1.8 -3.2 Tol-Pal system protein TolQ compare
IAI47_10925 -1.8 -3.4 EAL domain-containing protein compare
IAI47_16095 -1.8 -4.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
IAI47_00410 -1.8 -9.5 molybdenum cofactor guanylyltransferase MobA compare
IAI47_13145 -1.8 -7.1 molybdopterin-synthase adenylyltransferase MoeB compare
IAI47_05520 -1.7 -1.7 tRNA-Ala compare
IAI47_12030 -1.7 -9.9 PTS glucose transporter subunit IIBC compare
IAI47_04835 -1.7 -8.1 ATP-dependent RNA helicase SrmB compare
IAI47_04265 -1.7 -8.3 nitrate reductase molybdenum cofactor assembly chaperone compare
IAI47_17005 -1.7 -7.0 polyribonucleotide nucleotidyltransferase compare
IAI47_13480 -1.7 -2.0 molybdopterin synthase sulfur carrier subunit compare
IAI47_13485 -1.7 -4.4 cyclic pyranopterin monophosphate synthase MoaC compare
IAI47_13475 -1.7 -3.8 molybdopterin synthase catalytic subunit MoaE compare
IAI47_08450 -1.6 -4.5 Holliday junction branch migration DNA helicase RuvB compare
IAI47_06380 -1.6 -3.1 NADH-quinone oxidoreductase subunit NuoF compare
IAI47_13140 -1.5 -7.3 molybdopterin molybdotransferase MoeA compare
IAI47_06415 -1.5 -4.5 NADH-quinone oxidoreductase subunit M compare
IAI47_00455 -1.5 -6.8 nitrogen regulation protein NR(II) compare
IAI47_16190 -1.5 -4.5 molybdopterin adenylyltransferase compare
IAI47_04270 -1.5 -6.7 respiratory nitrate reductase subunit gamma compare
IAI47_04255 -1.4 -11.1 nitrate reductase subunit alpha compare
IAI47_11480 -1.4 -2.7 hypothetical protein compare
IAI47_12790 -1.4 -0.9 chromosome partition protein MukE compare
IAI47_11310 -1.4 -3.2 redox-regulated ATPase YchF compare
IAI47_12375 -1.4 -2.1 acyl carrier protein compare
IAI47_01955 -1.4 -7.4 aspartate aminotransferase family protein compare
IAI47_09040 -1.4 -3.3 NAD-dependent epimerase compare
IAI47_00515 -1.3 -1.9 DNA-directed RNA polymerase subunit omega compare
IAI47_18410 -1.3 -3.2 diaminopimelate epimerase compare
IAI47_15970 -1.3 -1.5 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
IAI47_08085 -1.3 -3.3 helix-turn-helix domain-containing protein compare
IAI47_15540 -1.3 -6.7 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_11475 -1.3 -1.4 hypothetical protein compare
IAI47_02695 -1.3 -6.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_12875 -1.3 -6.5 formate transporter FocA compare
IAI47_08305 -1.3 -5.4 chemotaxis protein CheW compare
IAI47_13690 -1.2 -1.2 cell envelope integrity protein TolA compare
IAI47_16990 -1.2 -3.4 DEAD/DEAH family ATP-dependent RNA helicase compare
IAI47_04260 -1.2 -8.1 nitrate reductase subunit beta compare
IAI47_05155 -1.2 -8.5 polyphosphate kinase 1 compare
IAI47_21730 -1.2 -2.9 hypothetical protein compare
IAI47_18055 -1.2 -3.7 DNA-binding protein HU-alpha compare
IAI47_15605 -1.2 -1.4 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
IAI47_07475 -1.1 -1.2 hypothetical protein compare
IAI47_17020 -1.1 -3.1 30S ribosome-binding factor RbfA compare
IAI47_03595 -1.1 -4.1 YggS family pyridoxal phosphate-dependent enzyme compare
IAI47_10675 -1.1 -3.1 hypothetical protein compare
IAI47_15595 -1.1 -1.8 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_00445 -1.1 -6.6 oxygen-independent coproporphyrinogen III oxidase compare
IAI47_01005 -1.1 -7.3 DUF413 domain-containing protein compare
IAI47_03685 -1.1 -5.5 erythrose-4-phosphate dehydrogenase compare
IAI47_04350 -1.1 -7.5 glutamate--cysteine ligase compare
IAI47_12110 -1.0 -3.3 ribonuclease E compare
IAI47_18435 -1.0 -7.4 uroporphyrinogen-III C-methyltransferase compare
IAI47_04870 -1.0 -3.9 elongation factor 4 compare
IAI47_06475 -1.0 -3.3 transcriptional regulator RcsB compare
IAI47_08325 -1.0 -5.6 protein-glutamate O-methyltransferase CheR compare
IAI47_15810 -1.0 -2.5 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI47_00870 -1.0 -1.0 50S ribosomal protein L31 compare
IAI47_03855 -1.0 -3.9 LysR family transcriptional regulator compare
IAI47_09245 -1.0 -2.5 YmiA family putative membrane protein compare
IAI47_18315 -1.0 -3.9 HTH-type transcriptional regulator MetR compare
IAI47_08300 -1.0 -6.1 chemotaxis protein CheA compare
IAI47_11935 -1.0 -7.7 two-component system sensor histidine kinase PhoQ compare
IAI47_13925 -1.0 -1.4 tRNA-Met compare
IAI47_10775 -1.0 -3.6 ribonuclease T compare
IAI47_15155 -1.0 -3.0 DUF943 family protein compare
IAI47_13495 -0.9 -2.9 GTP 3',8-cyclase MoaA compare
IAI47_09210 -0.9 -4.1 23S rRNA pseudouridine(2605) synthase RluB compare
IAI47_12275 -0.9 -7.6 glucans biosynthesis glucosyltransferase MdoH compare
IAI47_06420 -0.9 -2.4 NADH-quinone oxidoreductase subunit NuoN compare
IAI47_03615 -0.9 -4.3 glutathione synthase compare
IAI47_10840 -0.9 -2.2 pyruvate kinase PykF compare
IAI47_06405 -0.9 -1.8 NADH-quinone oxidoreductase subunit NuoK compare
IAI47_18770 -0.9 -2.3 type I addiction module toxin, SymE family compare
IAI47_01000 -0.9 -7.1 HTH-type transcriptional regulator HdfR compare
IAI47_21765 -0.9 -1.3 YoeB-YefM toxin-antitoxin system antitoxin YefM compare
IAI47_04155 -0.9 -5.6 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_13310 -0.9 -2.7 MerR family transcriptional regulator compare
IAI47_12280 -0.9 -5.6 glucan biosynthesis protein G compare
IAI47_08355 -0.9 -2.1 flagellar protein FlhE compare
IAI47_00900 -0.9 -5.2 acetylornithine deacetylase compare
IAI47_10320 -0.9 -0.4 Rrf2 family transcriptional regulator compare
IAI47_21115 -0.9 -2.2 arsenate reductase (glutaredoxin) compare
IAI47_03100 -0.9 -6.8 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
IAI47_06390 -0.9 -1.6 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_12300 -0.8 -2.2 hypothetical protein compare
IAI47_00450 -0.8 -5.5 nitrogen regulation protein NR(I) compare
IAI47_08845 -0.8 -1.0 cell division topological specificity factor MinE compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Aluminum potassium sulfate dodecahydrate across organisms