Experiment set2IT085 for Pantoea sp. MT58

Compare to:

Manganese (II) chloride tetrahydrate 50 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_00670 +2.8 25.8 sugar glycosyltransferase compare
IAI47_03640 +2.6 23.4 glycosyltransferase compare
IAI47_03645 +2.6 23.0 O-antigen ligase family protein compare
IAI47_00675 +2.6 23.5 glycosyltransferase family 9 protein compare
IAI47_18470 +2.4 21.2 ECA oligosaccharide polymerase compare
IAI47_18480 +2.2 17.0 lipid III flippase WzxE compare
IAI47_07020 +1.8 2.7 hypothetical protein compare
IAI47_00875 +1.8 2.8 met regulon transcriptional regulator MetJ compare
IAI47_10845 +1.8 7.2 major outer membrane lipoprotein compare
IAI47_07000 +1.6 11.0 UDP-glucose 4-epimerase GalE compare
IAI47_18490 +1.5 6.1 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
IAI47_00770 +1.4 1.6 general stress protein compare
IAI47_06940 +1.4 1.0 tyrosine-protein kinase Wzc compare
IAI47_09235 +1.3 1.8 type I DNA topoisomerase compare
IAI47_07015 +1.2 6.2 ABC transporter ATP-binding protein compare
IAI47_05745 +1.1 1.6 protease FtsH-inhibitory lysogeny factor CIII compare
IAI47_08010 +1.1 5.5 flagella biosynthesis chaperone FliJ compare
IAI47_07905 +1.1 1.1 Arc family DNA-binding protein compare
IAI47_12355 +1.0 1.9 hydroxymyristoyl-ACP dehydratase compare
IAI47_18485 +1.0 6.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
IAI47_13750 +1.0 2.8 succinate dehydrogenase iron-sulfur subunit compare
IAI47_06565 +1.0 0.8 YejL family protein compare
IAI47_13065 +1.0 1.4 DUF1418 family protein compare
IAI47_06675 +1.0 2.2 DUF1232 domain-containing protein compare
IAI47_18505 +1.0 5.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
IAI47_07930 +1.0 1.2 DUF2158 domain-containing protein compare
IAI47_17970 +1.0 2.8 hypothetical protein compare
IAI47_14700 +1.0 4.5 protoheme IX farnesyltransferase compare
IAI47_11535 +0.9 1.5 DcrB-related protein compare
IAI47_02385 +0.9 5.8 tRNA dihydrouridine synthase DusB compare
IAI47_06455 +0.9 3.7 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_18495 +0.9 4.2 glucose-1-phosphate thymidylyltransferase RfbA compare
IAI47_18465 +0.9 5.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
IAI47_11540 +0.9 1.5 type VI secretion system tip protein VgrG compare
IAI47_21610 +0.8 5.4 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
IAI47_07550 +0.8 0.9 tRNA-Asn compare
IAI47_13415 +0.8 6.6 L,D-transpeptidase family protein compare
IAI47_10565 +0.8 2.0 DUF4113 domain-containing protein compare
IAI47_07010 +0.8 2.1 ABC transporter permease compare
IAI47_18510 +0.8 5.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
IAI47_17215 +0.8 0.5 aerobic respiration two-component sensor histidine kinase ArcB compare
IAI47_08035 +0.8 1.4 flagellar hook-basal body complex protein FliE compare
IAI47_20540 +0.8 2.6 TetR/AcrR family transcriptional regulator compare
IAI47_12790 +0.8 0.7 chromosome partition protein MukE compare
IAI47_04705 +0.8 0.6 hypothetical protein compare
IAI47_04855 +0.8 2.3 anti-sigma-E factor RseA compare
IAI47_21605 +0.8 5.9 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
IAI47_06170 +0.7 2.6 YfcL family protein compare
IAI47_08700 +0.7 3.6 RNA chaperone ProQ compare
IAI47_07985 +0.7 3.7 flagellar biosynthetic protein FliO compare
IAI47_09435 +0.7 4.3 GtrA family protein compare
IAI47_18475 +0.7 4.2 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
IAI47_00300 +0.7 0.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_10835 +0.7 0.8 tRNA-Val compare
IAI47_11635 +0.7 2.0 hypothetical protein compare
IAI47_19750 +0.7 1.8 GNAT family N-acetyltransferase compare
IAI47_11625 +0.7 1.6 DUF1311 domain-containing protein compare
IAI47_06470 +0.7 4.6 two-component system sensor histidine kinase RcsC compare
IAI47_07390 +0.7 2.3 creatininase family protein compare
IAI47_15880 +0.7 1.4 DNA gyrase inhibitor YacG compare
IAI47_02345 +0.7 1.0 5S ribosomal RNA compare
IAI47_08740 +0.6 1.8 DUF2627 domain-containing protein compare
IAI47_01135 +0.6 0.6 hypothetical protein compare
IAI47_08635 +0.6 2.4 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI47_17980 +0.6 3.0 capsule biosynthesis GfcC family protein compare
IAI47_18520 +0.6 5.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
IAI47_08280 +0.6 3.7 flagellar transcriptional regulator FlhD compare
IAI47_14210 +0.6 1.7 hypothetical protein compare
IAI47_17205 +0.6 1.5 PTS phosphocarrier protein NPr compare
IAI47_15550 +0.6 2.7 DUF3461 family protein compare
IAI47_05465 +0.6 2.3 bile acid:sodium symporter compare
IAI47_05490 +0.6 1.7 tRNA-Val compare
IAI47_08745 +0.6 1.4 transcription antiterminator/RNA stability regulator CspE compare
IAI47_11200 +0.6 1.5 DotU family type IV/VI secretion system protein compare
IAI47_05050 +0.6 2.4 cytoskeleton protein RodZ compare
IAI47_08955 +0.6 2.9 DUF1315 family protein compare
IAI47_11670 +0.6 2.1 type VI secretion system protein TssA compare
IAI47_13675 +0.6 3.9 cell division protein CpoB compare
IAI47_21600 +0.6 1.1 EamA family transporter compare
IAI47_10500 +0.6 3.9 dipeptide/tripeptide permease DtpA compare
IAI47_21530 +0.6 1.6 FeoA domain-containing protein compare
IAI47_17075 +0.6 1.6 ribosome assembly RNA-binding protein YhbY compare
IAI47_08815 +0.6 1.5 hypothetical protein compare
IAI47_21470 +0.6 3.4 DUF2778 domain-containing protein compare
IAI47_10285 +0.6 2.8 SrfC compare
IAI47_09120 +0.6 1.4 hypothetical protein compare
IAI47_05755 +0.6 1.9 hypothetical protein compare
IAI47_19350 +0.6 2.0 DUF305 domain-containing protein compare
IAI47_19940 +0.6 1.8 hypothetical protein compare
IAI47_11830 +0.6 3.3 muramoyltetrapeptide carboxypeptidase compare
IAI47_04570 +0.6 2.5 hypothetical protein compare
IAI47_06750 +0.6 3.6 outer membrane permeability protein SanA compare
IAI47_12225 +0.6 1.8 hypothetical protein compare
IAI47_06905 +0.6 2.8 uridine kinase compare
IAI47_21375 +0.6 2.5 CsbD family protein compare
IAI47_20230 +0.5 2.6 peroxiredoxin compare
IAI47_04690 +0.5 2.5 hypothetical protein compare
IAI47_20770 +0.5 2.2 RraA family protein compare
IAI47_08860 +0.5 2.6 YcgL domain-containing protein compare
IAI47_15005 +0.5 0.5 hypothetical protein compare
IAI47_07990 +0.5 1.5 flagellar motor switch protein FliN compare
IAI47_16420 +0.5 3.7 LacI family DNA-binding transcriptional regulator compare
IAI47_09550 +0.5 1.9 hypothetical protein compare
IAI47_10740 +0.5 2.3 hypothetical protein compare
IAI47_07040 +0.5 1.4 acyltransferase compare
IAI47_06710 +0.5 1.6 LysR family transcriptional regulator compare
IAI47_12555 +0.5 1.7 hypothetical protein compare
IAI47_04755 +0.5 1.5 AlpA family transcriptional regulator compare
IAI47_07910 +0.5 3.5 DNA (cytosine-5-)-methyltransferase compare
IAI47_14130 +0.5 1.9 GNAT family N-acetyltransferase compare
IAI47_02520 +0.5 3.8 malate dehydrogenase compare
IAI47_14940 +0.5 0.7 YaiI/YqxD family protein compare
IAI47_19225 +0.5 2.1 PTS sugar transporter subunit IIB compare
IAI47_21080 +0.5 1.8 transposase compare
IAI47_19325 +0.5 1.6 transposase compare
IAI47_02585 +0.5 1.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
IAI47_11120 +0.5 3.0 YchO/YchP family invasin compare
IAI47_21595 +0.5 2.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
IAI47_03550 +0.5 3.5 membrane-bound lytic murein transglycosylase MltC compare
IAI47_17860 +0.5 1.7 envelope stress response protein PspG compare
IAI47_02575 +0.5 2.1 N-acetylmuramoyl-L-alanine amidase AmiB compare
IAI47_21495 +0.5 2.3 hypothetical protein compare
IAI47_08670 +0.5 1.7 DUF1272 domain-containing protein compare
IAI47_20045 +0.5 2.1 amino acid ABC transporter ATP-binding protein compare
IAI47_14685 +0.5 3.1 cytochrome o ubiquinol oxidase subunit I compare
IAI47_08160 +0.5 2.7 RNA polymerase sigma factor FliA compare
IAI47_07670 +0.5 2.2 SDR family NAD(P)-dependent oxidoreductase compare
IAI47_05830 +0.5 1.0 hypothetical protein compare
IAI47_08810 +0.5 1.8 hypothetical protein compare
IAI47_11850 +0.5 1.4 hypothetical protein compare
IAI47_02380 +0.5 0.7 DNA-binding transcriptional regulator Fis compare
IAI47_20330 +0.5 1.9 LacI family DNA-binding transcriptional regulator compare
IAI47_08840 +0.5 1.7 ribonuclease D compare
IAI47_19670 +0.5 2.7 type I methionyl aminopeptidase compare
IAI47_10265 +0.5 1.4 helix-turn-helix domain-containing protein compare
IAI47_05400 +0.5 2.4 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI47_13850 +0.5 1.6 LexA regulated protein compare
IAI47_11745 +0.5 2.4 phosphatase compare
IAI47_11700 +0.5 2.3 SH3 domain-containing protein compare
IAI47_11870 +0.5 1.4 DUF2767 family protein compare
IAI47_07025 +0.5 2.2 glycosyltransferase family 4 protein compare
IAI47_20175 +0.4 1.9 ABC transporter ATP-binding protein compare
IAI47_09795 +0.4 1.9 DUF1283 family protein compare
IAI47_19445 +0.4 2.5 LysR family transcriptional regulator compare
IAI47_08470 +0.4 3.3 murein DD-endopeptidase MepM compare
IAI47_17705 +0.4 2.1 helix-turn-helix transcriptional regulator compare
IAI47_08345 +0.4 3.0 flagellar type III secretion system protein FlhB compare
IAI47_15975 +0.4 2.2 division/cell wall cluster transcriptional repressor MraZ compare
IAI47_11360 +0.4 1.0 hypothetical protein compare
IAI47_06780 +0.4 2.0 iron-sulfur cluster carrier protein ApbC compare
IAI47_10275 +0.4 2.7 hypothetical protein compare
IAI47_01655 +0.4 1.8 gluconokinase compare
IAI47_16490 +0.4 1.0 PTS sugar transporter subunit IIA compare
IAI47_09060 +0.4 2.3 YchE family NAAT transporter compare
IAI47_14275 +0.4 1.7 GPW/gp25 family protein compare
IAI47_21670 +0.4 1.7 LuxR family transcriptional regulator compare
IAI47_19355 +0.4 1.8 response regulator compare
IAI47_12305 +0.4 2.0 hypothetical protein compare
IAI47_08285 +0.4 2.5 flagellar transcriptional regulator FlhC compare
IAI47_05195 +0.4 1.0 DnaA inactivator Hda compare
IAI47_09845 +0.4 1.4 hypothetical protein compare
IAI47_08350 +0.4 2.7 flagellar biosynthesis protein FlhA compare
IAI47_08915 +0.4 2.7 potassium/proton antiporter compare
IAI47_04095 +0.4 1.6 2-dehydro-3-deoxyglucarate aldolase compare
IAI47_03865 +0.4 1.0 PTS lactose/cellobiose transporter subunit IIA compare
IAI47_19080 +0.4 1.4 hypothetical protein compare
IAI47_19410 +0.4 2.1 ABC transporter substrate-binding protein compare
IAI47_03170 +0.4 1.6 antibiotic biosynthesis monooxygenase compare
IAI47_01230 +0.4 1.9 K(+)-transporting ATPase subunit F compare
IAI47_05600 +0.4 1.8 universal stress protein compare
IAI47_00440 +0.4 1.7 Der GTPase-activating protein YihI compare
IAI47_21770 +0.4 1.5 Txe/YoeB family addiction module toxin compare
IAI47_08015 +0.4 2.2 flagellum-specific ATP synthase FliI compare
IAI47_21410 +0.4 2.0 metallophosphoesterase compare
IAI47_07780 +0.4 1.3 phosphonate C-P lyase system protein PhnL compare
IAI47_13220 +0.4 1.9 flavin reductase family protein compare
IAI47_21830 +0.4 0.4 hypothetical protein compare
IAI47_15090 +0.4 1.3 hypothetical protein compare
IAI47_12140 +0.4 1.9 flagellar basal-body rod protein FlgG compare
IAI47_12135 +0.4 2.8 flagellar basal body L-ring protein FlgH compare
IAI47_05475 +0.4 1.3 FlxA-like family protein compare
IAI47_20225 +0.4 2.7 aldose 1-epimerase family protein compare
IAI47_18250 +0.4 1.4 transcription/translation regulatory transformer protein RfaH compare
IAI47_17710 +0.4 2.8 glutamate/aspartate:proton symporter GltP compare
IAI47_17460 +0.4 1.5 DotU family type IV/VI secretion system protein compare
IAI47_09945 +0.4 1.2 hydroxyisourate hydrolase compare
IAI47_11750 +0.4 1.7 glyoxylate/hydroxypyruvate reductase GhrA compare
IAI47_16945 +0.4 2.0 pyridoxamine 5'-phosphate oxidase family protein compare
IAI47_18930 +0.4 1.2 carboxymuconolactone decarboxylase family protein compare
IAI47_21275 +0.4 1.9 ABC transporter permease subunit compare
IAI47_05895 +0.4 1.5 hypothetical protein compare
IAI47_06665 +0.4 1.6 deoxyribonuclease IV compare
IAI47_19740 +0.4 1.6 anti-sigma factor compare
IAI47_13885 +0.4 0.5 N-acetylglucosamine-6-phosphate deacetylase compare
IAI47_20105 +0.4 2.8 ROK family transcriptional regulator compare
IAI47_20170 +0.4 2.1 ABC transporter permease compare
IAI47_19900 +0.4 1.5 amino acid ABC transporter ATP-binding protein compare
IAI47_01780 +0.4 0.8 Fe-S biogenesis protein NfuA compare
IAI47_01525 +0.4 1.2 DUF2500 domain-containing protein compare
IAI47_20805 +0.4 2.3 ornithine cyclodeaminase family protein compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Manganese (II) chloride tetrahydrate across organisms