Experiment set2IT083 for Pantoea sp. MT58

Compare to:

Uranyl Acetate Dihydrate 200 uM, anaerobic

200 most important genes:

  gene name fitness t score description  
IAI47_13685 -6.9 -5.0 Tol-Pal system protein TolB compare
IAI47_09040 -5.7 -4.1 NAD-dependent epimerase compare
IAI47_15635 -5.6 -5.4 RNA polymerase-binding protein DksA compare
IAI47_16205 -5.1 -8.5 threonine synthase compare
IAI47_05070 -4.6 -1.9 outer membrane protein assembly factor BamB compare
IAI47_13695 -4.5 -1.9 colicin uptake protein TolR compare
IAI47_07070 -4.5 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_11450 -4.3 -11.8 ankyrin repeat domain-containing protein compare
IAI47_07090 -4.2 -12.2 histidinol dehydrogenase compare
IAI47_01030 -4.2 -18.5 branched-chain amino acid transaminase compare
IAI47_12645 -4.0 -9.5 porin OmpA compare
IAI47_16350 -4.0 -12.1 phosphoserine phosphatase compare
IAI47_17965 -4.0 -17.4 glucose-6-phosphate isomerase compare
IAI47_03725 -3.9 -12.5 phosphoglycerate dehydrogenase compare
IAI47_01035 -3.9 -21.6 dihydroxy-acid dehydratase compare
IAI47_17220 -3.8 -26.7 glutamate synthase large subunit compare
IAI47_21655 -3.8 -1.6 LacI family DNA-binding transcriptional regulator compare
IAI47_07065 -3.8 -12.9 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_17225 -3.8 -20.6 sulfite reductase subunit alpha compare
IAI47_00895 -3.7 -20.6 phosphoenolpyruvate carboxylase compare
IAI47_15120 -3.7 -7.6 glutamate 5-kinase compare
IAI47_01050 -3.7 -19.4 ketol-acid reductoisomerase compare
IAI47_16210 -3.6 -14.9 homoserine kinase compare
IAI47_06275 -3.6 -19.6 amidophosphoribosyltransferase compare
IAI47_07060 -3.6 -13.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_04895 -3.6 -5.4 pyridoxine 5'-phosphate synthase compare
IAI47_14350 -3.6 -9.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_00905 -3.5 -13.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_04120 -3.5 -20.7 GTP diphosphokinase compare
IAI47_07080 -3.5 -11.5 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_08440 -3.5 -3.4 crossover junction endodeoxyribonuclease RuvC compare
IAI47_09175 -3.5 -14.1 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_07085 -3.5 -15.5 histidinol-phosphate transaminase compare
IAI47_05275 -3.5 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_08085 -3.5 -7.4 helix-turn-helix domain-containing protein compare
IAI47_16010 -3.4 -17.9 3-isopropylmalate dehydratase large subunit compare
IAI47_07075 -3.4 -10.9 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_15115 -3.3 -10.9 glutamate-5-semialdehyde dehydrogenase compare
IAI47_12885 -3.3 -11.7 pyruvate formate lyase 1-activating protein compare
IAI47_00655 -3.3 -7.1 glycosyltransferase family 4 protein compare
IAI47_00460 -3.3 -2.3 glutamate--ammonia ligase compare
IAI47_07095 -3.3 -12.1 ATP phosphoribosyltransferase compare
IAI47_05180 -3.3 -14.0 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_16080 -3.3 -10.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_09180 -3.2 -13.6 anthranilate phosphoribosyltransferase compare
IAI47_09190 -3.2 -13.6 anthranilate synthase component 1 compare
IAI47_17185 -3.2 -7.2 RNA polymerase factor sigma-54 compare
IAI47_09165 -3.2 -9.7 tryptophan synthase subunit alpha compare
IAI47_00780 -3.2 -3.8 6-phosphofructokinase compare
IAI47_16120 -3.2 -10.8 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_00920 -3.2 -15.7 argininosuccinate lyase compare
IAI47_00890 -3.2 -11.4 methylenetetrahydrofolate reductase compare
IAI47_09170 -3.2 -13.8 tryptophan synthase subunit beta compare
IAI47_00300 -3.2 -2.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_18040 -3.2 -17.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_13900 -3.2 -16.5 asparagine synthase B compare
IAI47_00910 -3.1 -10.0 acetylglutamate kinase compare
IAI47_13770 -3.1 -12.0 citrate synthase compare
IAI47_12215 -3.1 -12.7 dihydroorotase compare
IAI47_06235 -3.1 -8.8 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_12705 -3.1 -12.0 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_16115 -3.0 -19.4 carbamoyl-phosphate synthase large subunit compare
IAI47_00915 -3.0 -15.1 argininosuccinate synthase compare
IAI47_03975 -3.0 -14.7 amino-acid N-acetyltransferase compare
IAI47_00600 -3.0 -10.4 orotate phosphoribosyltransferase compare
IAI47_16830 -3.0 -14.8 ornithine carbamoyltransferase compare
IAI47_03860 -3.0 -13.3 diaminopimelate decarboxylase compare
IAI47_00880 -2.9 -15.2 cystathionine gamma-synthase compare
IAI47_16005 -2.9 -11.5 3-isopropylmalate dehydrogenase compare
IAI47_04930 -2.9 -17.8 phosphoribosylformylglycinamidine synthase compare
IAI47_09240 -2.9 -2.8 HTH-type transcriptional regulator CysB compare
IAI47_19945 -2.9 -1.7 hypothetical protein compare
IAI47_18015 -2.9 -13.1 homoserine O-succinyltransferase compare
IAI47_12865 -2.9 -11.3 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_16860 -2.8 -12.8 aspartate carbamoyltransferase compare
IAI47_18045 -2.8 -9.6 phosphoribosylamine--glycine ligase compare
IAI47_16000 -2.8 -14.8 2-isopropylmalate synthase compare
IAI47_07165 -2.8 -3.2 exodeoxyribonuclease I compare
IAI47_10520 -2.7 -4.1 pyridoxamine 5'-phosphate oxidase compare
IAI47_16215 -2.7 -15.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_08445 -2.6 -1.8 Holliday junction branch migration protein RuvA compare
IAI47_05440 -2.6 -11.0 cysteine synthase A compare
IAI47_15110 -2.6 -7.0 chromophore lyase compare
IAI47_09185 -2.5 -5.8 glutamine amidotransferase compare
IAI47_09275 -2.5 -8.2 orotidine-5'-phosphate decarboxylase compare
IAI47_14945 -2.5 -3.4 pyrroline-5-carboxylate reductase compare
IAI47_16015 -2.5 -6.0 3-isopropylmalate dehydratase small subunit compare
IAI47_01040 -2.5 -10.0 threonine ammonia-lyase, biosynthetic compare
IAI47_12880 -2.4 -15.7 formate C-acetyltransferase compare
IAI47_05425 -2.4 -5.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_09055 -2.4 -13.2 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
IAI47_00465 -2.3 -3.8 ribosome-dependent GTPase TypA compare
IAI47_05420 -2.3 -2.0 PTS glucose transporter subunit IIA compare
IAI47_06980 -2.2 -5.9 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_16870 -2.2 -4.9 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_06245 -2.1 -4.3 tRNA pseudouridine(38-40) synthase TruA compare
IAI47_04160 -2.1 -10.5 phosphoadenylyl-sulfate reductase compare
IAI47_00870 -2.1 -1.5 50S ribosomal protein L31 compare
IAI47_13140 -2.1 -8.2 molybdopterin molybdotransferase MoeA compare
IAI47_17005 -2.1 -7.3 polyribonucleotide nucleotidyltransferase compare
IAI47_04410 -2.1 -11.6 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_06325 -2.0 -6.8 acetate kinase compare
IAI47_13885 -2.0 -2.4 N-acetylglucosamine-6-phosphate deacetylase compare
IAI47_09360 -2.0 -1.6 peptide ABC transporter ATP-binding protein SapF compare
IAI47_12915 -2.0 -8.9 leucine-responsive transcriptional regulator Lrp compare
IAI47_17120 -1.9 -2.4 BolA family iron metabolism protein IbaG compare
IAI47_09580 -1.9 -2.8 FNR family transcription factor compare
IAI47_09010 -1.9 -6.8 formyltetrahydrofolate deformylase compare
IAI47_06320 -1.8 -6.5 phosphate acetyltransferase compare
IAI47_18830 -1.8 -1.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_03820 -1.8 -3.1 site-specific tyrosine recombinase XerD compare
IAI47_14355 -1.8 -6.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_06390 -1.7 -2.6 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_15540 -1.7 -9.3 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_03375 -1.7 -8.9 peptide chain release factor 3 compare
IAI47_16190 -1.7 -5.1 molybdopterin adenylyltransferase compare
IAI47_04265 -1.7 -7.9 nitrate reductase molybdenum cofactor assembly chaperone compare
IAI47_01955 -1.7 -9.6 aspartate aminotransferase family protein compare
IAI47_12375 -1.7 -2.3 acyl carrier protein compare
IAI47_04270 -1.6 -8.2 respiratory nitrate reductase subunit gamma compare
IAI47_00410 -1.6 -8.6 molybdenum cofactor guanylyltransferase MobA compare
IAI47_13145 -1.6 -5.8 molybdopterin-synthase adenylyltransferase MoeB compare
IAI47_13690 -1.6 -1.3 cell envelope integrity protein TolA compare
IAI47_21035 -1.6 -3.2 TetR/AcrR family transcriptional regulator compare
IAI47_00515 -1.5 -1.7 DNA-directed RNA polymerase subunit omega compare
IAI47_06385 -1.5 -4.0 NADH-quinone oxidoreductase subunit NuoG compare
IAI47_21015 -1.5 -3.8 helix-turn-helix transcriptional regulator compare
IAI47_04260 -1.5 -9.8 nitrate reductase subunit beta compare
IAI47_00455 -1.5 -7.0 nitrogen regulation protein NR(II) compare
IAI47_04255 -1.5 -11.7 nitrate reductase subunit alpha compare
IAI47_09245 -1.5 -3.4 YmiA family putative membrane protein compare
IAI47_04835 -1.5 -6.7 ATP-dependent RNA helicase SrmB compare
IAI47_01365 -1.5 -1.9 inorganic phosphate transporter PitA compare
IAI47_12110 -1.5 -3.1 ribonuclease E compare
IAI47_18405 -1.4 -4.5 DUF484 domain-containing protein compare
IAI47_21675 -1.4 -3.4 helix-turn-helix domain-containing protein compare
IAI47_08705 -1.4 -9.4 carboxy terminal-processing peptidase compare
IAI47_12030 -1.4 -8.0 PTS glucose transporter subunit IIBC compare
IAI47_00445 -1.4 -7.8 oxygen-independent coproporphyrinogen III oxidase compare
IAI47_10320 -1.3 -1.1 Rrf2 family transcriptional regulator compare
IAI47_08450 -1.3 -3.5 Holliday junction branch migration DNA helicase RuvB compare
IAI47_13745 -1.3 -2.9 2-oxoglutarate dehydrogenase E1 component compare
IAI47_13485 -1.3 -3.9 cyclic pyranopterin monophosphate synthase MoaC compare
IAI47_13700 -1.3 -2.6 Tol-Pal system protein TolQ compare
IAI47_17910 -1.3 -3.1 chorismate lyase compare
IAI47_03615 -1.2 -6.0 glutathione synthase compare
IAI47_06405 -1.2 -2.3 NADH-quinone oxidoreductase subunit NuoK compare
IAI47_18435 -1.2 -8.3 uroporphyrinogen-III C-methyltransferase compare
IAI47_02400 -1.2 -1.2 YhdT family protein compare
IAI47_16995 -1.2 -2.2 protein YrbN compare
IAI47_01780 -1.2 -1.7 Fe-S biogenesis protein NfuA compare
IAI47_08165 -1.2 -5.4 flagella biosynthesis regulatory protein FliZ compare
IAI47_13475 -1.2 -2.1 molybdopterin synthase catalytic subunit MoaE compare
IAI47_18410 -1.2 -3.7 diaminopimelate epimerase compare
IAI47_13495 -1.2 -3.9 GTP 3',8-cyclase MoaA compare
IAI47_18520 -1.2 -9.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
IAI47_02695 -1.1 -6.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_05155 -1.1 -8.1 polyphosphate kinase 1 compare
IAI47_00735 -1.1 -1.2 protein-export chaperone SecB compare
IAI47_18315 -1.1 -4.5 HTH-type transcriptional regulator MetR compare
IAI47_06355 -1.1 -6.1 transcriptional regulator LrhA compare
IAI47_13480 -1.1 -2.5 molybdopterin synthase sulfur carrier subunit compare
IAI47_04870 -1.1 -3.9 elongation factor 4 compare
IAI47_12875 -1.1 -5.1 formate transporter FocA compare
IAI47_13950 -1.1 -1.1 PhoH family protein compare
IAI47_09210 -1.1 -4.7 23S rRNA pseudouridine(2605) synthase RluB compare
IAI47_11935 -1.0 -8.3 two-component system sensor histidine kinase PhoQ compare
IAI47_04245 -1.0 -5.4 two-component system response regulator NarL compare
IAI47_06370 -1.0 -3.6 NADH-quinone oxidoreductase subunit C/D compare
IAI47_21880 -1.0 -0.7 ParA family protein compare
IAI47_06655 -1.0 -2.8 1-phosphofructokinase compare
IAI47_04350 -1.0 -7.2 glutamate--cysteine ligase compare
IAI47_13925 -1.0 -0.7 tRNA-Met compare
IAI47_10840 -1.0 -3.0 pyruvate kinase PykF compare
IAI47_07010 -1.0 -1.2 ABC transporter permease compare
IAI47_07175 -1.0 -5.6 FUSC family protein compare
IAI47_12260 -1.0 -2.7 hypothetical protein compare
IAI47_04150 -1.0 -6.4 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_06415 -1.0 -2.7 NADH-quinone oxidoreductase subunit M compare
IAI47_01005 -0.9 -6.4 DUF413 domain-containing protein compare
IAI47_00450 -0.9 -6.5 nitrogen regulation protein NR(I) compare
IAI47_18400 -0.9 -1.5 tyrosine recombinase XerC compare
IAI47_16520 -0.9 -6.3 hypothetical protein compare
IAI47_00900 -0.9 -5.7 acetylornithine deacetylase compare
IAI47_06420 -0.9 -2.4 NADH-quinone oxidoreductase subunit NuoN compare
IAI47_09305 -0.9 -2.2 cyclic di-GMP phosphodiesterase compare
IAI47_04250 -0.9 -5.8 NarK family nitrate/nitrite MFS transporter compare
IAI47_00755 -0.9 -5.3 envelope stress sensor histidine kinase CpxA compare
IAI47_07030 -0.9 -5.2 HAD family hydrolase compare
IAI47_09505 -0.9 -3.9 YnbE family lipoprotein compare
IAI47_18675 -0.9 -3.0 MarR family transcriptional regulator compare
IAI47_08355 -0.9 -1.5 flagellar protein FlhE compare
IAI47_17020 -0.9 -2.0 30S ribosome-binding factor RbfA compare
IAI47_04155 -0.8 -5.4 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_18055 -0.8 -3.9 DNA-binding protein HU-alpha compare
IAI47_03855 -0.8 -3.8 LysR family transcriptional regulator compare
IAI47_04805 -0.8 -3.7 outer membrane protein assembly factor BamE compare
IAI47_01000 -0.8 -6.4 HTH-type transcriptional regulator HdfR compare
IAI47_16220 -0.8 -3.0 thr operon leader peptide compare
IAI47_16950 -0.8 -2.4 GIY-YIG nuclease family protein compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Uranyl Acetate Dihydrate across organisms