Experiment set2IT083 for Pantoea sp. MT58

Compare to:

Uranyl Acetate Dihydrate 200 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_00875 +2.0 2.7 met regulon transcriptional regulator MetJ compare
IAI47_15485 +1.7 2.2 molecular chaperone Skp compare
IAI47_06940 +1.6 1.4 tyrosine-protein kinase Wzc compare
IAI47_02380 +1.4 2.3 DNA-binding transcriptional regulator Fis compare
IAI47_06965 +1.4 2.9 glycosyltransferase family 2 protein compare
IAI47_10755 +1.2 3.4 DUF1289 domain-containing protein compare
IAI47_05745 +1.2 3.3 protease FtsH-inhibitory lysogeny factor CIII compare
IAI47_11375 +1.0 1.2 hypothetical protein compare
IAI47_08745 +1.0 2.4 transcription antiterminator/RNA stability regulator CspE compare
IAI47_06470 +1.0 7.7 two-component system sensor histidine kinase RcsC compare
IAI47_08010 +1.0 5.3 flagella biosynthesis chaperone FliJ compare
IAI47_08160 +1.0 5.5 RNA polymerase sigma factor FliA compare
IAI47_05525 +1.0 1.6 tRNA-Ala compare
IAI47_08025 +0.9 5.4 flagellar motor switch protein FliG compare
IAI47_07990 +0.9 3.3 flagellar motor switch protein FliN compare
IAI47_04800 +0.9 1.3 RnfH family protein compare
IAI47_06360 +0.9 2.1 NADH-quinone oxidoreductase subunit A compare
IAI47_04865 +0.9 2.3 SoxR-reducing system protein RseC compare
IAI47_11425 +0.8 2.6 hypothetical protein compare
IAI47_12160 +0.8 5.3 flagellar basal body rod protein FlgC compare
IAI47_06675 +0.8 1.8 DUF1232 domain-containing protein compare
IAI47_08345 +0.8 6.3 flagellar type III secretion system protein FlhB compare
IAI47_08285 +0.8 5.7 flagellar transcriptional regulator FlhC compare
IAI47_12140 +0.8 4.4 flagellar basal-body rod protein FlgG compare
IAI47_12150 +0.8 6.1 flagellar hook protein FlgE compare
IAI47_06455 +0.8 3.0 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_09395 +0.8 1.5 phage shock protein PspA compare
IAI47_12155 +0.8 5.9 flagellar hook assembly protein FlgD compare
IAI47_12130 +0.8 5.7 flagellar basal body P-ring protein FlgI compare
IAI47_12165 +0.8 4.5 flagellar basal body rod protein FlgB compare
IAI47_05830 +0.8 2.5 hypothetical protein compare
IAI47_12135 +0.7 5.9 flagellar basal body L-ring protein FlgH compare
IAI47_09400 +0.7 2.5 envelope stress response membrane protein PspB compare
IAI47_08015 +0.7 4.2 flagellum-specific ATP synthase FliI compare
IAI47_07550 +0.7 0.7 tRNA-Asn compare
IAI47_08280 +0.7 4.8 flagellar transcriptional regulator FlhD compare
IAI47_00835 +0.7 2.0 cell division protein ZapB compare
IAI47_08030 +0.7 5.0 flagellar M-ring protein FliF compare
IAI47_02345 +0.7 0.8 5S ribosomal RNA compare
IAI47_08815 +0.7 1.7 hypothetical protein compare
IAI47_13740 +0.7 0.5 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
IAI47_07980 +0.7 4.3 flagellar type III secretion system pore protein FliP compare
IAI47_11540 +0.6 1.7 type VI secretion system tip protein VgrG compare
IAI47_17645 +0.6 2.0 hypothetical protein compare
IAI47_10845 +0.6 1.6 major outer membrane lipoprotein compare
IAI47_12170 +0.6 4.3 flagellar basal body P-ring formation protein FlgA compare
IAI47_08005 +0.6 4.0 flagellar hook-length control protein FliK compare
IAI47_08145 +0.6 5.3 flagellin FliC compare
IAI47_14075 +0.6 1.1 transcription antiterminator/RNA stability regulator CspE compare
IAI47_07995 +0.6 4.7 flagellar motor switch protein FliM compare
IAI47_11535 +0.6 1.1 DcrB-related protein compare
IAI47_11015 +0.6 2.9 5-dehydro-4-deoxy-D-glucuronate isomerase compare
IAI47_00925 +0.6 1.7 hypothetical protein compare
IAI47_08035 +0.6 1.7 flagellar hook-basal body complex protein FliE compare
IAI47_07525 +0.6 1.5 conjugal transfer protein TraD compare
IAI47_19045 +0.6 1.5 two-component-system connector protein YcgZ compare
IAI47_06480 +0.6 4.2 phosphotransferase RcsD compare
IAI47_14730 +0.6 0.9 exodeoxyribonuclease VII small subunit compare
IAI47_08020 +0.6 3.0 flagellar assembly protein FliH compare
IAI47_12145 +0.6 3.3 flagellar basal body rod protein FlgF compare
IAI47_12545 +0.6 2.1 general stress protein compare
IAI47_05125 +0.6 1.5 hypothetical protein compare
IAI47_21530 +0.6 1.8 FeoA domain-containing protein compare
IAI47_10470 +0.6 1.4 electron transport complex subunit E compare
IAI47_07020 +0.6 0.8 hypothetical protein compare
IAI47_01750 +0.5 2.7 glycerol-3-phosphate dehydrogenase compare
IAI47_00670 +0.5 4.9 sugar glycosyltransferase compare
IAI47_15090 +0.5 2.2 hypothetical protein compare
IAI47_07000 +0.5 3.3 UDP-glucose 4-epimerase GalE compare
IAI47_06585 +0.5 2.4 16S rRNA pseudouridine(516) synthase RsuA compare
IAI47_11490 +0.5 2.5 PAAR domain-containing protein compare
IAI47_10825 +0.5 0.6 tRNA-Val compare
IAI47_05195 +0.5 1.1 DnaA inactivator Hda compare
IAI47_07975 +0.5 2.3 flagellar biosynthesis protein FliQ compare
IAI47_07885 +0.5 0.4 tRNA-Asn compare
IAI47_14200 +0.5 1.0 hypothetical protein compare
IAI47_18470 +0.5 4.2 ECA oligosaccharide polymerase compare
IAI47_20840 +0.5 1.9 Lrp/AsnC family transcriptional regulator compare
IAI47_07905 +0.5 0.5 Arc family DNA-binding protein compare
IAI47_02520 +0.5 3.6 malate dehydrogenase compare
IAI47_20330 +0.5 2.3 LacI family DNA-binding transcriptional regulator compare
IAI47_13075 +0.5 2.8 hypothetical protein compare
IAI47_12355 +0.5 1.5 hydroxymyristoyl-ACP dehydratase compare
IAI47_18985 +0.5 1.3 MarR family transcriptional regulator compare
IAI47_19455 +0.5 2.3 MBL fold metallo-hydrolase compare
IAI47_00930 +0.5 3.1 DNA-binding transcriptional regulator OxyR compare
IAI47_07970 +0.5 2.8 flagellar type III secretion system protein FliR compare
IAI47_07985 +0.5 2.6 flagellar biosynthetic protein FliO compare
IAI47_16420 +0.5 3.6 LacI family DNA-binding transcriptional regulator compare
IAI47_15995 +0.5 0.7 leu operon leader peptide compare
IAI47_14325 +0.5 1.2 ribosome-associated protein YbcJ compare
IAI47_21780 +0.5 1.3 hypothetical protein compare
IAI47_00565 +0.5 1.7 DUF3289 family protein compare
IAI47_05690 +0.5 2.1 hypothetical protein compare
IAI47_08350 +0.4 3.4 flagellar biosynthesis protein FlhA compare
IAI47_12125 +0.4 3.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
IAI47_09230 +0.4 1.8 YciN family protein compare
IAI47_08465 +0.4 2.8 zinc ABC transporter substrate-binding protein ZnuA compare
IAI47_20655 +0.4 2.2 glycosyltransferase family 1 protein compare
IAI47_10225 +0.4 1.4 pyrroloquinoline quinone precursor peptide PqqA compare
IAI47_13225 +0.4 3.1 histidine ammonia-lyase compare
IAI47_06565 +0.4 0.5 YejL family protein compare
IAI47_07055 +0.4 2.0 YbaK/prolyl-tRNA synthetase associated domain-containing protein compare
IAI47_21490 +0.4 2.0 H-NS histone family protein compare
IAI47_18590 +0.4 3.2 biofilm formation regulator HmsP compare
IAI47_07880 +0.4 1.6 hypothetical protein compare
IAI47_21765 +0.4 0.9 YoeB-YefM toxin-antitoxin system antitoxin YefM compare
IAI47_03645 +0.4 3.6 O-antigen ligase family protein compare
IAI47_12930 +0.4 1.5 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI47_01135 +0.4 0.4 hypothetical protein compare
IAI47_20005 +0.4 1.6 PTS sugar transporter subunit IIA compare
IAI47_07700 +0.4 1.7 EAL domain-containing protein compare
IAI47_10505 +0.4 1.9 glutathione transferase GstA compare
IAI47_08455 +0.4 2.3 zinc ABC transporter permease subunit ZnuB compare
IAI47_18065 +0.4 1.8 deoxyribonuclease V compare
IAI47_18480 +0.4 2.6 lipid III flippase WzxE compare
IAI47_16410 +0.4 1.4 YbaK/EbsC family protein compare
IAI47_11515 +0.4 0.8 hypothetical protein compare
IAI47_04705 +0.4 0.5 hypothetical protein compare
IAI47_03805 +0.4 1.3 FAD assembly factor SdhE compare
IAI47_21520 +0.4 1.8 YgdI/YgdR family lipoprotein compare
IAI47_01180 +0.4 0.6 prolyl oligopeptidase family serine peptidase compare
IAI47_08290 +0.4 2.6 flagellar motor stator protein MotA compare
IAI47_21770 +0.4 1.5 Txe/YoeB family addiction module toxin compare
IAI47_12370 +0.4 0.6 acyl carrier protein compare
IAI47_15580 +0.4 1.7 hypothetical protein compare
IAI47_20640 +0.4 1.5 hypothetical protein compare
IAI47_15260 +0.4 1.6 amino acid ABC transporter permease compare
IAI47_12305 +0.4 2.0 hypothetical protein compare
IAI47_11115 +0.4 1.2 hypothetical protein compare
IAI47_08045 +0.4 0.6 NUDIX domain-containing protein compare
IAI47_15600 +0.4 0.8 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
IAI47_08295 +0.4 2.7 flagellar motor protein MotB compare
IAI47_17980 +0.4 1.8 capsule biosynthesis GfcC family protein compare
IAI47_02875 +0.4 2.1 phage holin family protein compare
IAI47_03640 +0.4 3.1 glycosyltransferase compare
IAI47_06335 +0.4 2.2 YfbU family protein compare
IAI47_03355 +0.4 2.0 urea carboxylase-associated family protein compare
IAI47_08140 +0.4 2.7 flagellar filament capping protein FliD compare
IAI47_04965 +0.4 1.9 3-phenylpropionate MFS transporter compare
IAI47_21835 +0.4 2.3 N-acetyltransferase compare
IAI47_02725 +0.4 1.8 gamma-glutamylcyclotransferase compare
IAI47_20650 +0.4 1.7 polyprenyl synthetase family protein compare
IAI47_03635 +0.4 1.7 hypothetical protein compare
IAI47_07910 +0.3 2.5 DNA (cytosine-5-)-methyltransferase compare
IAI47_11215 +0.3 2.4 type VI secretion system-associated FHA domain protein TagH compare
IAI47_19500 +0.3 1.5 Insecticidal toxin complex protein tccz compare
IAI47_21145 +0.3 2.0 hypothetical protein compare
IAI47_20000 +0.3 1.7 PTS sugar transporter subunit IIB compare
IAI47_08080 +0.3 1.2 hypothetical protein compare
IAI47_20510 +0.3 1.6 maltose operon protein MalM compare
IAI47_05975 +0.3 1.2 NTP pyrophosphohydrolase compare
IAI47_08185 +0.3 1.6 L-cystine ABC transporter ATP-binding protein YecC compare
IAI47_05400 +0.3 2.1 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI47_07720 +0.3 1.8 hypothetical protein compare
IAI47_17985 +0.3 3.0 YjbH domain-containing protein compare
IAI47_21275 +0.3 1.6 ABC transporter permease subunit compare
IAI47_21665 +0.3 0.6 DUF333 domain-containing protein compare
IAI47_04075 +0.3 2.2 galactarate dehydratase compare
IAI47_04855 +0.3 1.6 anti-sigma-E factor RseA compare
IAI47_05860 +0.3 1.7 YlcG family protein compare
IAI47_07250 +0.3 0.7 tRNA-Asn compare
IAI47_21720 +0.3 1.6 efflux RND transporter periplasmic adaptor subunit compare
IAI47_15735 +0.3 1.9 four-carbon acid sugar kinase family protein compare
IAI47_19530 +0.3 1.5 hypothetical protein compare
IAI47_21670 +0.3 1.4 LuxR family transcriptional regulator compare
IAI47_18885 +0.3 2.2 LysR family transcriptional regulator compare
IAI47_21125 +0.3 1.3 metalloregulator ArsR/SmtB family transcription factor compare
IAI47_19350 +0.3 1.2 DUF305 domain-containing protein compare
IAI47_12475 +0.3 1.5 DUF2594 family protein compare
IAI47_15630 +0.3 1.9 DNA/RNA nuclease SfsA compare
IAI47_16490 +0.3 1.1 PTS sugar transporter subunit IIA compare
IAI47_02575 +0.3 1.9 N-acetylmuramoyl-L-alanine amidase AmiB compare
IAI47_15550 +0.3 1.5 DUF3461 family protein compare
IAI47_09435 +0.3 2.0 GtrA family protein compare
IAI47_02770 +0.3 1.4 cytochrome b562 compare
IAI47_19740 +0.3 1.7 anti-sigma factor compare
IAI47_21485 +0.3 2.4 helix-turn-helix domain-containing protein compare
IAI47_04450 +0.3 1.0 tRNA-Ala compare
IAI47_08935 +0.3 1.8 aldo/keto reductase compare
IAI47_15605 +0.3 0.5 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
IAI47_12120 +0.3 2.4 flagellar hook-associated protein FlgK compare
IAI47_12115 +0.3 2.2 flagellar hook-associated protein FlgL compare
IAI47_09870 +0.3 1.1 LacI family DNA-binding transcriptional regulator compare
IAI47_05395 +0.3 2.3 sulfate/thiosulfate ABC transporter permease CysW compare
IAI47_17520 +0.3 1.6 LysR family transcriptional regulator compare
IAI47_07965 +0.3 1.6 transcriptional regulator RcsA compare
IAI47_20450 +0.3 1.4 LysR family transcriptional regulator compare
IAI47_14680 +0.3 1.3 cytochrome o ubiquinol oxidase subunit II compare
IAI47_14695 +0.3 1.1 cytochrome o ubiquinol oxidase subunit IV compare
IAI47_21460 +0.3 1.8 NAD(P)-dependent alcohol dehydrogenase compare
IAI47_21410 +0.3 1.4 metallophosphoesterase compare
IAI47_05770 +0.3 1.2 hypothetical protein compare
IAI47_10885 +0.3 1.4 hypothetical protein compare
IAI47_06305 +0.3 1.8 TIGR01777 family protein compare
IAI47_14295 +0.3 1.1 hypothetical protein compare
IAI47_11420 +0.3 0.6 hypothetical protein compare
IAI47_14700 +0.3 1.8 protoheme IX farnesyltransferase compare
IAI47_20425 +0.3 2.2 flavocytochrome c compare
IAI47_01550 +0.3 1.9 cell division protein FtsX compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Uranyl Acetate Dihydrate across organisms