Experiment set2IT083 for Burkholderia phytofirmans PsJN

Compare to:

LB with MreB Perturbing Compound A22 0.005 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS07705 +2.4 6.2 arginine succinyltransferase compare
BPHYT_RS04945 +2.1 19.0 membrane protein compare
BPHYT_RS12150 +2.0 13.3 PII uridylyl-transferase compare
BPHYT_RS04950 +2.0 17.1 hypothetical protein compare
BPHYT_RS09510 +2.0 11.8 amino acid dehydrogenase compare
BPHYT_RS13645 +1.6 13.6 threonine--tRNA ligase compare
BPHYT_RS06790 +1.5 9.9 hypothetical protein compare
BPHYT_RS15305 +1.4 6.6 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
BPHYT_RS04940 +1.4 2.5 hypothetical protein compare
BPHYT_RS01935 +1.4 9.4 lipoprotein compare
BPHYT_RS12820 +1.4 6.6 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS26975 +1.4 2.5 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS16065 +1.3 1.4 LacI family transcriptional regulator compare
BPHYT_RS25470 +1.2 2.4 alkylhydroperoxidase compare
BPHYT_RS17095 +1.2 4.0 proline--tRNA ligase compare
BPHYT_RS07085 +1.1 3.3 LysR family transcriptional regulator compare
BPHYT_RS14845 +1.1 4.2 cysteine synthase compare
BPHYT_RS34430 +1.0 1.4 2-keto-4-pentenoate hydratase compare
BPHYT_RS34370 +1.0 5.1 ATPase compare
BPHYT_RS14790 +1.0 6.2 D-amino acid dehydrogenase compare
BPHYT_RS15620 +1.0 3.7 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS16675 +1.0 2.6 dihydroorotase compare
BPHYT_RS26490 +1.0 1.7 hypothetical protein compare
BPHYT_RS28830 +1.0 1.3 LysR family transcriptional regulator compare
BPHYT_RS14755 +1.0 2.4 tRNA (guanine-N(1)-)-methyltransferase compare
BPHYT_RS28690 +0.9 2.0 diguanylate phosphodiesterase compare
BPHYT_RS31675 +0.9 1.6 hypothetical protein compare
BPHYT_RS33890 +0.9 5.5 fimbrial protein FimV compare
BPHYT_RS27455 +0.9 1.2 rod shape-determining protein MreB compare
BPHYT_RS33535 +0.9 8.2 RNA polymerase sigma factor RpoD compare
BPHYT_RS10165 +0.9 2.1 transcriptional regulator compare
BPHYT_RS09160 +0.9 4.4 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS19985 +0.9 1.3 CoA-transferase compare
BPHYT_RS23460 +0.9 1.3 AraC family transcriptional regulator compare
BPHYT_RS14250 +0.9 6.1 glycosyl transferase compare
BPHYT_RS17380 +0.9 5.7 ribulose-phosphate 3-epimerase compare
BPHYT_RS16270 +0.9 3.7 phosphoglycerate kinase compare
BPHYT_RS08815 +0.9 5.9 L-asparaginase (EC 3.5.1.1) (from data) compare
BPHYT_RS30610 +0.8 1.3 major facilitator transporter compare
BPHYT_RS02660 +0.8 1.2 membrane protein compare
BPHYT_RS18265 +0.8 2.3 phenylacetate-CoA oxygenase subunit PaaJ compare
BPHYT_RS18465 +0.8 5.8 membrane protein compare
BPHYT_RS36440 +0.8 1.7 hypothetical protein compare
BPHYT_RS02765 +0.8 2.5 cytochrome BD oxidase subunit I compare
BPHYT_RS28535 +0.8 1.1 response regulator receiver compare
BPHYT_RS02035 +0.8 1.3 hypothetical protein compare
BPHYT_RS06405 +0.8 4.2 phosphoribosylamine--glycine ligase compare
BPHYT_RS33460 +0.8 1.1 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS07425 +0.8 0.9 hypothetical protein compare
BPHYT_RS34665 +0.8 2.2 hypothetical protein compare
BPHYT_RS02970 +0.8 6.7 excinuclease ABC subunit A compare
BPHYT_RS04955 +0.8 2.4 methionyl-tRNA synthetase compare
BPHYT_RS33840 +0.8 4.9 amidophosphoribosyltransferase compare
BPHYT_RS31050 +0.8 1.1 epimerase compare
BPHYT_RS13605 +0.8 1.0 tRNA-Pro compare
BPHYT_RS11685 +0.8 1.3 phasin family protein compare
BPHYT_RS32360 +0.8 1.7 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS10240 +0.7 1.0 translation initiation inhibitor compare
BPHYT_RS33885 +0.7 5.3 tRNA pseudouridine synthase A compare
BPHYT_RS32605 +0.7 2.1 hypothetical protein compare
BPHYT_RS08190 +0.7 1.2 type II secretion system protein compare
BPHYT_RS08000 +0.7 1.6 antibiotic biosynthesis monooxygenase compare
BPHYT_RS08415 +0.7 1.8 hypothetical protein compare
BPHYT_RS27850 +0.7 1.5 hemerythrin compare
BPHYT_RS05355 +0.7 2.1 Crp/Fnr family transcriptional regulator compare
BPHYT_RS14255 +0.7 6.0 ABC transporter compare
BPHYT_RS33905 +0.7 1.3 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS03625 +0.7 3.7 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS28575 +0.7 1.0 transcriptional regulator compare
BPHYT_RS35735 +0.7 1.3 nitroreductase compare
BPHYT_RS21215 +0.7 3.2 Crp/Fnr family transcriptional regulator compare
BPHYT_RS07675 +0.7 1.5 ABC transporter for L-Arginine, permease component 2 (from data) compare
BPHYT_RS10670 +0.7 1.3 catechol 1,2-dioxygenase compare
BPHYT_RS33920 +0.7 4.9 type II citrate synthase compare
BPHYT_RS03645 +0.7 1.9 tRNA dimethylallyltransferase compare
BPHYT_RS16255 +0.7 2.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS02365 +0.7 1.0 hypothetical protein compare
BPHYT_RS33540 +0.7 3.1 hypothetical protein compare
BPHYT_RS17715 +0.7 3.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS14105 +0.7 5.8 exopolyphosphatase compare
BPHYT_RS18420 +0.7 1.6 hypothetical protein compare
BPHYT_RS24565 +0.7 1.6 membrane protein compare
BPHYT_RS04450 +0.7 2.8 UDP-glucose 4-epimerase compare
BPHYT_RS20900 +0.7 2.3 phytanoyl-CoA dioxygenase compare
BPHYT_RS18515 +0.7 2.2 hypothetical protein compare
BPHYT_RS20000 +0.7 2.5 serine/threonine protein kinase compare
BPHYT_RS20545 +0.7 1.6 hypothetical protein compare
BPHYT_RS16180 +0.7 0.8 TetR family transcriptional regulator compare
BPHYT_RS24290 +0.7 1.8 hypothetical protein compare
BPHYT_RS21805 +0.7 1.8 transcriptional regulator compare
BPHYT_RS14205 +0.7 4.6 lytic transglycosylase compare
BPHYT_RS25640 +0.7 2.5 MFS transporter compare
BPHYT_RS00380 +0.7 1.9 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS16265 +0.7 1.4 hypothetical protein compare
BPHYT_RS20120 +0.7 1.5 porin compare
BPHYT_RS01685 +0.7 3.5 phytanoyl-CoA dioxygenase compare
BPHYT_RS14145 +0.7 4.7 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS13470 +0.7 0.8 arylsulfate sulfotransferase compare
BPHYT_RS32155 +0.6 1.3 type IV secretion system protein VirB11 compare
BPHYT_RS21170 +0.6 1.4 LysR family transcriptional regulator compare
BPHYT_RS01235 +0.6 1.4 hypothetical protein compare
BPHYT_RS17725 +0.6 3.0 BolA family transcriptional regulator compare
BPHYT_RS10465 +0.6 2.1 hypothetical protein compare
BPHYT_RS26135 +0.6 1.5 ABC transporter permease compare
BPHYT_RS16985 +0.6 2.7 esterase compare
BPHYT_RS35615 +0.6 1.8 hypothetical protein compare
BPHYT_RS13185 +0.6 2.1 2,4-dienoyl-CoA reductase compare
BPHYT_RS22060 +0.6 5.7 amino acid transporter compare
BPHYT_RS24220 +0.6 1.1 alpha/beta hydrolase compare
BPHYT_RS04910 +0.6 1.2 phenylacetic acid degradation protein compare
BPHYT_RS11170 +0.6 1.0 hypothetical protein compare
BPHYT_RS06085 +0.6 3.4 ferredoxin compare
BPHYT_RS15490 +0.6 3.4 coproporphyrinogen III oxidase compare
BPHYT_RS22270 +0.6 2.3 membrane protein compare
BPHYT_RS10005 +0.6 1.0 hypothetical protein compare
BPHYT_RS15435 +0.6 1.8 ethyl tert-butyl ether degradation EthD compare
BPHYT_RS12840 +0.6 2.4 pyruvate dehydrogenase compare
BPHYT_RS04455 +0.6 1.0 glycosyl transferase compare
BPHYT_RS06985 +0.6 2.5 fumarate hydratase compare
BPHYT_RS02530 +0.6 3.7 hypothetical protein compare
BPHYT_RS01820 +0.6 2.2 sugar ABC transporter ATP-binding protein compare
BPHYT_RS05255 +0.6 2.0 phage abortive infection protein compare
BPHYT_RS18780 +0.6 4.3 flagellar motor switch protein FliG compare
BPHYT_RS08165 +0.6 1.2 pilus assembly protein TadE compare
BPHYT_RS21485 +0.6 0.9 hypothetical protein compare
BPHYT_RS26715 +0.6 1.3 GTP-binding protein compare
BPHYT_RS35560 +0.6 1.3 endoribonuclease L-PSP compare
BPHYT_RS36400 +0.6 0.9 hypothetical protein compare
BPHYT_RS05955 +0.6 2.2 hypothetical protein compare
BPHYT_RS24615 +0.6 2.6 peptidase M23 compare
BPHYT_RS36340 +0.6 2.2 hypothetical protein compare
BPHYT_RS00790 +0.6 1.4 conjugal transfer protein TraF compare
BPHYT_RS35215 +0.6 0.6 dehydrogenase compare
BPHYT_RS00955 +0.6 1.9 DNA polymerase compare
BPHYT_RS08170 +0.6 1.4 pilus assembly protein CpaB compare
BPHYT_RS22030 +0.6 2.3 peptide ABC transporter ATP-binding protein compare
BPHYT_RS13080 +0.6 0.9 hypothetical protein compare
BPHYT_RS20920 +0.6 2.7 oxidoreductase compare
BPHYT_RS11310 +0.6 1.1 LysR family transcriptional regulator compare
BPHYT_RS27160 +0.6 1.3 hypothetical protein compare
BPHYT_RS34175 +0.6 2.9 N-acylglucosamine 2-epimerase compare
BPHYT_RS26820 +0.6 1.2 LysR family transcriptional regulator compare
BPHYT_RS00585 +0.6 2.2 hypothetical protein compare
BPHYT_RS32145 +0.6 2.5 type IV secretory pathway protein VirD4 compare
BPHYT_RS29865 +0.6 1.2 sugar transferase compare
BPHYT_RS26660 +0.6 1.3 precorrin-4 C11-methyltransferase compare
BPHYT_RS08595 +0.6 1.2 multidrug transporter compare
BPHYT_RS07690 +0.6 1.9 AraC family transcriptional regulator compare
BPHYT_RS10850 +0.6 0.9 LysR family transcriptional regulator compare
BPHYT_RS04215 +0.6 1.5 hypothetical protein compare
BPHYT_RS11255 +0.6 1.4 AsnC family transcriptional regulator compare
BPHYT_RS03925 +0.6 1.4 LysR family transcriptional regulator compare
BPHYT_RS27250 +0.6 1.4 NAD-dependent epimerase/dehydratase compare
BPHYT_RS26300 +0.6 1.3 ATP-dependent DNA ligase compare
BPHYT_RS09545 +0.6 1.1 peptide methionine sulfoxide reductase compare
BPHYT_RS30380 +0.6 2.0 glyoxalase compare
BPHYT_RS09365 +0.6 1.4 cytochrome C2 compare
BPHYT_RS16430 +0.6 4.7 cytochrome C compare
BPHYT_RS18810 +0.6 2.9 flagellar motor switch protein FliM compare
BPHYT_RS24245 +0.6 2.0 MerR family transcriptional regulator compare
BPHYT_RS21790 +0.6 1.5 hypothetical protein compare
BPHYT_RS32170 +0.5 2.7 conjugal transfer protein TraJ compare
BPHYT_RS28505 +0.5 0.9 5-deoxyglucuronate isomerase compare
BPHYT_RS22320 +0.5 1.3 hypothetical protein compare
BPHYT_RS22720 +0.5 2.6 LysR family transcriptional regulator compare
BPHYT_RS33820 +0.5 4.0 histidine kinase compare
BPHYT_RS26435 +0.5 1.1 hypothetical protein compare
BPHYT_RS25565 +0.5 1.3 hypothetical protein compare
BPHYT_RS34785 +0.5 3.8 hypothetical protein compare
BPHYT_RS14120 +0.5 2.3 chemotaxis protein CheY compare
BPHYT_RS14500 +0.5 0.7 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS15755 +0.5 1.7 mannose-6-phosphate isomerase compare
BPHYT_RS29400 +0.5 1.9 MFS transporter compare
BPHYT_RS28680 +0.5 1.1 porin compare
BPHYT_RS00115 +0.5 1.0 acetaldehyde dehydrogenase compare
BPHYT_RS13815 +0.5 1.3 hypothetical protein compare
BPHYT_RS14480 +0.5 3.3 ribosomal large subunit pseudouridine synthase C compare
BPHYT_RS03405 +0.5 1.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BPHYT_RS26930 +0.5 2.7 mechanosensitive ion channel protein compare
BPHYT_RS29890 +0.5 1.1 LysR family transcriptional regulator compare
BPHYT_RS06105 +0.5 0.8 hypothetical protein compare
BPHYT_RS25025 +0.5 2.4 acyl-CoA dehydrogenase compare
BPHYT_RS20970 +0.5 1.1 hypothetical protein compare
BPHYT_RS11840 +0.5 2.4 LysR family transcriptional regulator compare
BPHYT_RS15465 +0.5 1.4 tRNA-Gly compare
BPHYT_RS18250 +0.5 3.3 phenylacetate-CoA oxygenase subunit PaaA compare
BPHYT_RS13705 +0.5 1.9 chorismate synthase compare
BPHYT_RS09770 +0.5 2.4 acyltransferase compare
BPHYT_RS01280 +0.5 1.3 hypothetical protein compare
BPHYT_RS11745 +0.5 0.9 (2Fe-2S)-binding protein compare
BPHYT_RS18775 +0.5 3.9 flagellar M-ring protein FliF compare
BPHYT_RS18745 +0.5 2.1 coniferyl aldehyde dehydrogenase compare
BPHYT_RS22390 +0.5 2.4 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS36060 +0.5 2.6 hypothetical protein compare
BPHYT_RS34075 +0.5 2.3 chemotaxis protein CheY compare
BPHYT_RS13395 +0.5 1.2 endoribonuclease L-PSP compare
BPHYT_RS29060 +0.5 1.7 hypothetical protein compare
BPHYT_RS00740 +0.5 1.7 hypothetical protein compare
BPHYT_RS14260 +0.5 4.0 trehalose-6-phosphate synthase compare
BPHYT_RS33170 +0.5 1.5 acetyltransferase compare


Specific Phenotypes

For 5 genes in this experiment

For stress MreB Perturbing Compound A22 in Burkholderia phytofirmans PsJN

For stress MreB Perturbing Compound A22 across organisms