Experiment set2IT082 for Pantoea sp. MT58

Compare to:

Uranyl Acetate Dihydrate 200 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_06965 +1.6 2.6 glycosyltransferase family 2 protein compare
IAI47_18215 +1.2 2.5 Trk system potassium transporter TrkH compare
IAI47_07020 +1.1 1.6 hypothetical protein compare
IAI47_02380 +1.1 2.6 DNA-binding transcriptional regulator Fis compare
IAI47_06940 +1.1 0.9 tyrosine-protein kinase Wzc compare
IAI47_06470 +1.1 8.1 two-component system sensor histidine kinase RcsC compare
IAI47_08160 +1.0 6.7 RNA polymerase sigma factor FliA compare
IAI47_07990 +1.0 3.0 flagellar motor switch protein FliN compare
IAI47_08025 +0.9 6.0 flagellar motor switch protein FliG compare
IAI47_21450 +0.9 1.1 general stress protein compare
IAI47_16390 +0.9 1.1 tRNA-Leu compare
IAI47_08745 +0.9 2.5 transcription antiterminator/RNA stability regulator CspE compare
IAI47_00770 +0.9 1.1 general stress protein compare
IAI47_12150 +0.9 7.0 flagellar hook protein FlgE compare
IAI47_08345 +0.9 7.0 flagellar type III secretion system protein FlhB compare
IAI47_08010 +0.9 5.0 flagella biosynthesis chaperone FliJ compare
IAI47_08030 +0.8 6.3 flagellar M-ring protein FliF compare
IAI47_12135 +0.8 6.8 flagellar basal body L-ring protein FlgH compare
IAI47_12155 +0.8 5.6 flagellar hook assembly protein FlgD compare
IAI47_12165 +0.8 4.3 flagellar basal body rod protein FlgB compare
IAI47_12140 +0.8 4.4 flagellar basal-body rod protein FlgG compare
IAI47_08350 +0.8 5.5 flagellar biosynthesis protein FlhA compare
IAI47_00875 +0.8 1.0 met regulon transcriptional regulator MetJ compare
IAI47_08280 +0.8 5.0 flagellar transcriptional regulator FlhD compare
IAI47_19940 +0.7 3.3 hypothetical protein compare
IAI47_08285 +0.7 4.8 flagellar transcriptional regulator FlhC compare
IAI47_07985 +0.7 4.7 flagellar biosynthetic protein FliO compare
IAI47_00835 +0.7 2.2 cell division protein ZapB compare
IAI47_06455 +0.7 3.5 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_14695 +0.7 3.4 cytochrome o ubiquinol oxidase subunit IV compare
IAI47_07980 +0.7 4.7 flagellar type III secretion system pore protein FliP compare
IAI47_12170 +0.7 5.0 flagellar basal body P-ring formation protein FlgA compare
IAI47_12160 +0.7 4.1 flagellar basal body rod protein FlgC compare
IAI47_16600 +0.7 1.8 tRNA-OTHER compare
IAI47_08815 +0.7 2.3 hypothetical protein compare
IAI47_10845 +0.7 1.9 major outer membrane lipoprotein compare
IAI47_13710 +0.7 1.7 cyd operon protein YbgE compare
IAI47_08015 +0.6 4.5 flagellum-specific ATP synthase FliI compare
IAI47_11375 +0.6 1.2 hypothetical protein compare
IAI47_07995 +0.6 4.7 flagellar motor switch protein FliM compare
IAI47_10825 +0.6 1.1 tRNA-Val compare
IAI47_12130 +0.6 4.9 flagellar basal body P-ring protein FlgI compare
IAI47_06450 +0.6 2.7 ribonucleotide-diphosphate reductase subunit beta compare
IAI47_18490 +0.6 2.7 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
IAI47_11635 +0.6 1.7 hypothetical protein compare
IAI47_08290 +0.6 4.5 flagellar motor stator protein MotA compare
IAI47_07000 +0.6 4.5 UDP-glucose 4-epimerase GalE compare
IAI47_06230 +0.6 1.9 hypothetical protein compare
IAI47_19350 +0.6 2.1 DUF305 domain-containing protein compare
IAI47_13750 +0.6 1.9 succinate dehydrogenase iron-sulfur subunit compare
IAI47_05525 +0.6 1.4 tRNA-Ala compare
IAI47_18480 +0.6 4.0 lipid III flippase WzxE compare
IAI47_06480 +0.6 4.4 phosphotransferase RcsD compare
IAI47_08020 +0.6 4.1 flagellar assembly protein FliH compare
IAI47_12145 +0.6 3.8 flagellar basal body rod protein FlgF compare
IAI47_08005 +0.6 3.5 flagellar hook-length control protein FliK compare
IAI47_10565 +0.6 1.2 DUF4113 domain-containing protein compare
IAI47_06170 +0.6 2.4 YfcL family protein compare
IAI47_16420 +0.6 4.8 LacI family DNA-binding transcriptional regulator compare
IAI47_08145 +0.6 5.0 flagellin FliC compare
IAI47_21880 +0.6 0.6 ParA family protein compare
IAI47_00670 +0.6 5.2 sugar glycosyltransferase compare
IAI47_12355 +0.6 1.6 hydroxymyristoyl-ACP dehydratase compare
IAI47_18265 +0.6 1.0 Sec-independent protein translocase subunit TatB compare
IAI47_08605 +0.6 1.6 hypothetical protein compare
IAI47_11425 +0.6 1.9 hypothetical protein compare
IAI47_17285 +0.6 2.9 entericidin A/B family lipoprotein compare
IAI47_12125 +0.5 4.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
IAI47_08045 +0.5 1.0 NUDIX domain-containing protein compare
IAI47_18470 +0.5 4.5 ECA oligosaccharide polymerase compare
IAI47_02385 +0.5 3.8 tRNA dihydrouridine synthase DusB compare
IAI47_11515 +0.5 1.2 hypothetical protein compare
IAI47_17980 +0.5 2.9 capsule biosynthesis GfcC family protein compare
IAI47_02520 +0.5 4.1 malate dehydrogenase compare
IAI47_21640 +0.5 2.4 sigma-70 family RNA polymerase sigma factor compare
IAI47_20625 +0.5 1.6 DUF2946 domain-containing protein compare
IAI47_20640 +0.5 1.9 hypothetical protein compare
IAI47_08610 +0.5 2.2 tail fiber assembly protein compare
IAI47_04740 +0.5 1.6 hypothetical protein compare
IAI47_12375 +0.5 0.9 acyl carrier protein compare
IAI47_15070 +0.5 2.5 hypothetical protein compare
IAI47_17075 +0.5 2.2 ribosome assembly RNA-binding protein YhbY compare
IAI47_13850 +0.5 1.9 LexA regulated protein compare
IAI47_13065 +0.5 0.8 DUF1418 family protein compare
IAI47_08295 +0.5 3.4 flagellar motor protein MotB compare
IAI47_05195 +0.5 0.9 DnaA inactivator Hda compare
IAI47_11325 +0.5 2.6 P1 family peptidase compare
IAI47_01750 +0.5 2.3 glycerol-3-phosphate dehydrogenase compare
IAI47_08090 +0.5 1.6 hypothetical protein compare
IAI47_07730 +0.5 2.7 AAA family ATPase compare
IAI47_20115 +0.5 2.5 DUF1090 domain-containing protein compare
IAI47_20830 +0.5 2.2 DUF2000 domain-containing protein compare
IAI47_15630 +0.5 2.7 DNA/RNA nuclease SfsA compare
IAI47_08340 +0.5 2.1 protein phosphatase CheZ compare
IAI47_07970 +0.5 2.9 flagellar type III secretion system protein FliR compare
IAI47_12115 +0.4 3.1 flagellar hook-associated protein FlgL compare
IAI47_13010 +0.4 3.0 arginine ABC transporter permease ArtM compare
IAI47_17385 +0.4 1.1 CDP-alcohol phosphatidyltransferase family protein compare
IAI47_03640 +0.4 3.8 glycosyltransferase compare
IAI47_16950 +0.4 1.5 GIY-YIG nuclease family protein compare
IAI47_08035 +0.4 1.0 flagellar hook-basal body complex protein FliE compare
IAI47_09400 +0.4 1.5 envelope stress response membrane protein PspB compare
IAI47_09435 +0.4 2.8 GtrA family protein compare
IAI47_03645 +0.4 3.6 O-antigen ligase family protein compare
IAI47_12430 +0.4 2.6 hypothetical protein compare
IAI47_07930 +0.4 0.5 DUF2158 domain-containing protein compare
IAI47_19690 +0.4 0.8 hypothetical protein compare
IAI47_14495 +0.4 0.9 hypothetical protein compare
IAI47_09490 +0.4 1.9 DUF333 domain-containing protein compare
IAI47_17205 +0.4 0.9 PTS phosphocarrier protein NPr compare
IAI47_09105 +0.4 1.8 YciY family protein compare
IAI47_15600 +0.4 1.1 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
IAI47_10275 +0.4 3.0 hypothetical protein compare
IAI47_16295 +0.4 2.0 urea ABC transporter ATP-binding protein UrtD compare
IAI47_08465 +0.4 2.6 zinc ABC transporter substrate-binding protein ZnuA compare
IAI47_05120 +0.4 1.2 DUF2158 domain-containing protein compare
IAI47_18250 +0.4 2.0 transcription/translation regulatory transformer protein RfaH compare
IAI47_09135 +0.4 2.4 acyl-CoA thioester hydrolase YciA compare
IAI47_08140 +0.4 2.9 flagellar filament capping protein FliD compare
IAI47_02840 +0.4 1.8 YraN family protein compare
IAI47_06360 +0.4 0.7 NADH-quinone oxidoreductase subunit A compare
IAI47_06905 +0.4 2.3 uridine kinase compare
IAI47_20385 +0.4 1.7 aspartate aminotransferase family protein compare
IAI47_21610 +0.4 2.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
IAI47_17250 +0.4 2.8 cell division protein ZapE compare
IAI47_20450 +0.4 2.0 LysR family transcriptional regulator compare
IAI47_07015 +0.4 1.8 ABC transporter ATP-binding protein compare
IAI47_12995 +0.4 2.2 arginine ABC transporter ATP-binding protein ArtP compare
IAI47_11115 +0.4 1.5 hypothetical protein compare
IAI47_19445 +0.4 2.2 LysR family transcriptional regulator compare
IAI47_05140 +0.4 1.7 DUF2633 family protein compare
IAI47_07040 +0.4 1.3 acyltransferase compare
IAI47_21470 +0.4 1.9 DUF2778 domain-containing protein compare
IAI47_05510 +0.4 2.6 putative DNA-binding transcriptional regulator compare
IAI47_01725 +0.4 2.2 biotin-independent malonate decarboxylase subunit gamma compare
IAI47_19685 +0.4 1.2 hypothetical protein compare
IAI47_15050 +0.4 2.2 hypothetical protein compare
IAI47_00945 +0.4 1.5 YijD family membrane protein compare
IAI47_13265 +0.4 1.5 HutD family protein compare
IAI47_19400 +0.4 2.1 nucleotidyltransferase family protein compare
IAI47_21305 +0.4 1.5 AzlC family ABC transporter permease compare
IAI47_07700 +0.4 1.2 EAL domain-containing protein compare
IAI47_08000 +0.4 2.3 flagellar basal body-associated protein FliL compare
IAI47_11015 +0.4 1.7 5-dehydro-4-deoxy-D-glucuronate isomerase compare
IAI47_21770 +0.4 1.7 Txe/YoeB family addiction module toxin compare
IAI47_11765 +0.4 1.6 GlsB/YeaQ/YmgE family stress response membrane protein compare
IAI47_16415 +0.4 2.7 nucleoside hydrolase compare
IAI47_05125 +0.4 1.2 hypothetical protein compare
IAI47_19080 +0.4 1.0 hypothetical protein compare
IAI47_08460 +0.4 2.2 zinc ABC transporter ATP-binding protein ZnuC compare
IAI47_03480 +0.4 1.5 DUF2474 domain-containing protein compare
IAI47_06040 +0.4 0.8 DNA polymerase V compare
IAI47_00860 +0.4 2.8 DNA-binding transcriptional regulator CytR compare
IAI47_15395 +0.4 2.6 MetQ/NlpA family lipoprotein compare
IAI47_19430 +0.4 0.9 GNAT family N-acetyltransferase compare
IAI47_09835 +0.3 2.4 FAD-dependent urate hydroxylase HpxO compare
IAI47_20440 +0.3 1.5 SDR family oxidoreductase compare
IAI47_02475 +0.3 1.6 AaeX family protein compare
IAI47_13950 +0.3 0.4 PhoH family protein compare
IAI47_09535 +0.3 2.2 carboxypeptidase M32 compare
IAI47_11390 +0.3 1.8 DcrB-related protein compare
IAI47_08990 +0.3 2.0 exodeoxyribonuclease III compare
IAI47_20125 +0.3 1.6 hypothetical protein compare
IAI47_03885 +0.3 2.5 FCD domain-containing protein compare
IAI47_14680 +0.3 1.5 cytochrome o ubiquinol oxidase subunit II compare
IAI47_07055 +0.3 1.1 YbaK/prolyl-tRNA synthetase associated domain-containing protein compare
IAI47_16085 +0.3 0.4 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
IAI47_01100 +0.3 2.7 malate dehydrogenase (quinone) compare
IAI47_09350 +0.3 2.4 oxidoreductase compare
IAI47_07640 +0.3 1.9 4-aminobutyrate--2-oxoglutarate transaminase compare
IAI47_17645 +0.3 1.6 hypothetical protein compare
IAI47_18475 +0.3 2.1 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
IAI47_05460 +0.3 1.6 DUF3820 family protein compare
IAI47_13435 +0.3 2.3 ATP-dependent RNA helicase RhlE compare
IAI47_10265 +0.3 1.2 helix-turn-helix domain-containing protein compare
IAI47_06250 +0.3 2.2 DedA family protein compare
IAI47_11510 +0.3 1.5 hypothetical protein compare
IAI47_04570 +0.3 1.7 hypothetical protein compare
IAI47_10270 +0.3 1.4 benzoate/H(+) symporter BenE family transporter compare
IAI47_12695 +0.3 2.5 MOSC domain-containing protein compare
IAI47_07620 +0.3 1.9 FAD-binding oxidoreductase compare
IAI47_20705 +0.3 0.6 sulfur carrier protein ThiS compare
IAI47_07885 +0.3 0.5 tRNA-Asn compare
IAI47_09695 +0.3 2.1 HTH-type transcriptional activator RhaS compare
IAI47_17315 +0.3 1.7 FxsA family protein compare
IAI47_08790 +0.3 2.0 CoA pyrophosphatase compare
IAI47_04395 +0.3 1.9 GNAT family N-acetyltransferase compare
IAI47_19560 +0.3 2.1 type 1 glutamine amidotransferase domain-containing protein compare
IAI47_07880 +0.3 1.7 hypothetical protein compare
IAI47_21375 +0.3 1.3 CsbD family protein compare
IAI47_03385 +0.3 1.1 DUF1328 domain-containing protein compare
IAI47_12655 +0.3 2.4 Lon protease family protein compare
IAI47_07720 +0.3 1.7 hypothetical protein compare
IAI47_07190 +0.3 2.1 ketopantoate reductase family protein compare
IAI47_09410 +0.3 1.1 phage shock protein PspD compare
IAI47_04450 +0.3 0.7 tRNA-Ala compare
IAI47_14920 +0.3 1.2 pyrimidine/purine nucleoside phosphorylase compare
IAI47_07360 +0.3 0.8 hypothetical protein compare
IAI47_04110 +0.3 2.8 two-component sensor histidine kinase BarA compare
IAI47_15645 +0.3 1.7 polynucleotide adenylyltransferase PcnB compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Uranyl Acetate Dihydrate across organisms