Experiment set2IT081 for Pseudomonas syringae pv. syringae B728a

Compare to:

epiphytic; Green bean

200 most important genes:

  gene name fitness t score description  
Psyr_3597 -4.7 -1.5 ABC transporter compare
Psyr_0557 -4.6 -4.5 phosphoserine phosphatase compare
Psyr_0385 -3.8 -4.5 phosphoribosyl-ATP pyrophosphatase compare
Psyr_1663 -3.7 -5.0 phosphoribosylanthranilate isomerase compare
Psyr_0827 -3.7 -5.2 pantothenate synthetase compare
Psyr_2462 -3.6 -6.0 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_4852 -3.6 -9.6 D-3-phosphoglycerate dehydrogenase compare
Psyr_3555 -3.5 -2.2 aspartate kinase compare
Psyr_4609 -3.4 -13.5 anthranilate synthase, component I compare
Psyr_4270 -3.2 -9.1 serine hydroxymethyltransferase compare
Psyr_1668 -3.2 -8.0 amidophosphoribosyltransferase compare
Psyr_3293 -3.1 -2.7 UspA compare
Psyr_0529 -3.0 -5.8 Glycosyl transferase, group 1 compare
Psyr_0034 -3.0 -4.1 tryptophan synthase, beta chain compare
Psyr_3886 -3.0 -2.6 methionyl-tRNA synthetase compare
Psyr_0033 -2.9 -4.4 tryptophan synthase, alpha chain compare
Psyr_4407 -2.8 -3.3 phosphoribosylamine--glycine ligase compare
Psyr_3193 -2.7 -3.6 Transcription factor jumonji, jmjC compare
Psyr_4369 -2.7 -6.0 glutamate-5-semialdehyde dehydrogenase compare
Psyr_4460 -2.6 -2.4 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0469 -2.5 -10.1 dihydroxyacid dehydratase compare
Psyr_4687 -2.5 -7.0 biotin synthase compare
Psyr_0378 -2.5 -9.0 Glycosyl transferase, family 2 compare
Psyr_3008 -2.4 -6.7 Undecaprenyl-diphosphatase compare
Psyr_1121 -2.4 -2.3 6-phosphogluconolactonase compare
Psyr_0532 -2.3 -5.6 conserved hypothetical protein compare
Psyr_4581 -2.3 -2.1 anthranilate synthase, component II compare
Psyr_4335 -2.3 -2.9 transcriptional regulator, AsnC family compare
Psyr_0846 -2.3 -8.0 acetolactate synthase, large subunit compare
Psyr_3174 -2.3 -4.3 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_4991 -2.2 -1.5 hypothetical protein compare
Psyr_5132 -2.2 -3.0 Glucose-inhibited division protein A subfamily compare
Psyr_0377 -2.2 -7.2 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_4896 -2.2 -7.3 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_0847 -2.2 -5.8 acetolactate synthase, small subunit compare
Psyr_2244 -2.2 -2.0 DNA topoisomerase III compare
Psyr_3202 -2.1 -2.4 NADH dehydrogenase subunit G compare
Psyr_4580 -2.1 -2.1 anthranilate phosphoribosyltransferase compare
Psyr_0831 -2.1 -2.4 Two-component response regulator CbrB compare
Psyr_0917 -2.1 -5.8 ABC-2 compare
Psyr_1408 -2.1 -3.0 Holliday junction endonuclease RuvC compare
Psyr_1269 -2.1 -4.3 phosphoribosylformylglycinamidine synthase compare
Psyr_4362 -2.1 -3.6 Rare lipoprotein A compare
Psyr_0918 -2.1 -8.9 ABC transporter compare
Psyr_4416 -2.0 -4.0 precorrin-8X methylmutase compare
Psyr_0454 -2.0 -5.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0832 -2.0 -8.3 Two-component sensor kinase CbrA compare
Psyr_3673 -2.0 -1.9 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_1984 -2.0 -2.8 3-isopropylmalate dehydratase, small subunit compare
Psyr_4151 -2.0 -0.8 Phosphocarrier HPr protein compare
Psyr_0923 -1.9 -5.5 hypothetical protein compare
Psyr_4822 -1.9 -2.9 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_1613 -1.9 -4.3 septum site-determining protein MinC compare
Psyr_1983 -1.9 -5.3 3-isopropylmalate dehydratase, large subunit compare
Psyr_1410 -1.9 -4.4 Holliday junction DNA helicase RuvB compare
Psyr_1317 -1.8 -2.2 conserved hypothetical protein compare
Psyr_4887 -1.8 -7.4 Peptidase S41A, C-terminal protease compare
Psyr_0487 -1.8 -2.9 glutathione synthase compare
Psyr_4893 -1.8 -1.6 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3208 -1.7 -2.4 NADH dehydrogenase subunit M compare
Psyr_0411 -1.7 -11.2 glutamate synthase (NADPH) large subunit compare
Psyr_4132 -1.7 -6.2 histidinol phosphate aminotransferase apoenzyme compare
Psyr_0383 -1.7 -1.6 Twin-arginine translocation protein TatB compare
Psyr_2970 -1.7 -5.3 TPR repeat protein:TPR repeat protein compare
Psyr_1875 -1.7 -2.0 Enoyl-CoA hydratase/isomerase compare
Psyr_2077 -1.7 -4.7 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_0531 -1.7 -1.9 LmbE-like protein compare
Psyr_1158 -1.7 -3.3 Gluconate transporter compare
Psyr_1378 -1.6 -3.0 RecA protein compare
Psyr_0848 -1.6 -4.5 ketol-acid reductoisomerase compare
Psyr_3432 -1.6 -2.6 MotA/TolQ/ExbB proton channel compare
Psyr_1747 -1.6 -4.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_0976 -1.6 -3.7 Malate:quinone-oxidoreductase compare
Psyr_4203 -1.6 -1.8 SsrA-binding protein compare
Psyr_4686 -1.6 -4.3 8-amino-7-oxononanoate synthase compare
Psyr_1251 -1.6 -2.8 quinoprotein compare
Psyr_2067 -1.6 -1.8 ABC transporter compare
Psyr_0464 -1.6 -2.0 hypothetical protein compare
Psyr_0576 -1.6 -3.1 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_1109 -1.5 -5.9 6-phosphogluconate dehydratase compare
Psyr_4138 -1.5 -3.6 Toluene tolerance compare
Psyr_4512 -1.5 -5.2 putative phage-related protein compare
Psyr_4491 -1.5 -2.5 Deoxyribose-phosphate aldolase compare
Psyr_4194 -1.5 -3.7 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4842 -1.5 -4.6 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_3795 -1.5 -2.0 hypothetical protein compare
Psyr_2327 -1.5 -1.8 GTP cyclohydrolase subunit MoaA compare
Psyr_0549 -1.5 -1.7 Metallophosphoesterase compare
Psyr_4582 -1.4 -0.9 hypothetical protein compare
Psyr_1780 -1.4 -1.4 transcriptional regulator, TetR family compare
Psyr_4843 -1.4 -3.1 NUDIX hydrolase compare
Psyr_0025 -1.4 -2.4 shikimate dehydrogenase compare
Psyr_1120 -1.4 -5.5 glucose-6-phosphate 1-dehydrogenase compare
Psyr_0704 -1.4 -5.7 glutamate 5-kinase compare
Psyr_0826 -1.4 -3.8 glucose-6-phosphate isomerase compare
Psyr_4684 -1.4 -2.2 biotin synthesis protein BioC compare
Psyr_3369 -1.4 -3.4 Twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase compare
Psyr_0822 -1.4 -1.4 1-phosphofructokinase compare
Psyr_2980 -1.4 -2.8 UDP-glucose pyrophosphorylase compare
Psyr_1373 -1.4 -1.8 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1202 -1.4 -2.0 negative regulator of hrp expression HrpV compare
Psyr_2227 -1.3 -2.1 conserved hypothetical protein compare
Psyr_3684 -1.3 -2.0 NLP/P60 compare
Psyr_4408 -1.3 -5.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_5065 -1.3 -5.5 ATP-dependent DNA helicase UvrD compare
Psyr_1985 -1.3 -4.9 3-isopropylmalate dehydrogenase compare
Psyr_0849 -1.3 -6.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_0983 -1.3 -4.7 Protein of unknown function DUF159 compare
Psyr_2461 -1.3 -3.0 Uncharacterized conserved protein UCP030820 compare
Psyr_0167 -1.3 -2.1 hypothetical protein compare
Psyr_3419 -1.3 -3.6 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4134 -1.3 -3.9 ATP phosphoribosyltransferase (homohexameric) compare
Psyr_4683 -1.3 -2.2 dethiobiotin synthase compare
Psyr_1236 -1.2 -2.1 transcriptional regulator, BadM/Rrf2 family compare
Psyr_0947 -1.2 -4.1 TPR repeat protein:TPR repeat protein compare
Psyr_3198 -1.2 -1.8 NADH dehydrogenase subunit B compare
Psyr_1596 -1.2 -1.4 Helix-turn-helix motif protein compare
Psyr_4350 -1.2 -2.1 Protein of unknown function DUF218 compare
Psyr_3581 -1.2 -4.1 ribosomal large subunit pseudouridine synthase B compare
Psyr_1946 -1.2 -1.5 diaminobutyrate aminotransferase apoenzyme compare
Psyr_0493 -1.2 -2.1 CheW-like protein compare
Psyr_5129 -1.2 -3.3 chromosome segregation DNA-binding protein compare
Psyr_0833 -1.2 -3.5 conserved hypothetical protein compare
Psyr_1544 -1.2 -2.9 SirA-like protein compare
Psyr_2183 -1.2 -3.7 transcriptional regulator, GntR family compare
Psyr_3637 -1.2 -7.0 Glycosyl transferase, family 4 compare
Psyr_1942 -1.2 -3.3 conserved hypothetical protein compare
Psyr_0076 -1.1 -2.4 Xanthine phosphoribosyltransferase compare
Psyr_4894 -1.1 -3.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_1198 -1.1 -2.2 type III secretion protein HrpF compare
Psyr_4622 -1.1 -2.7 Nucleotidyl transferase compare
Psyr_0208 -1.1 -4.6 endoribonuclease L-PSP compare
Psyr_2084 -1.1 -2.5 transcriptional regulator, GntR family compare
Psyr_3739 -1.1 -1.5 conserved hypothetical protein compare
Psyr_1212 -1.1 -1.8 type III secretion protein HrpO compare
Psyr_0447 -1.1 -2.2 malonate decarboxylase subunit, putative compare
Psyr_0817 -1.1 -2.0 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_4126 -1.1 -6.7 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_1140 -1.1 -2.7 Disulfide bond formation protein DsbB compare
Psyr_2984 -1.1 -1.7 conserved hypothetical protein compare
Psyr_3594 -1.1 -2.9 membrane protein-like protein compare
Psyr_5135 -1.1 -1.0 Protein of unknown function DUF37 compare
Psyr_3604 -1.1 -1.8 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_1852 -1.1 -1.9 conserved hypothetical protein compare
Psyr_2347 -1.1 -2.5 hypothetical protein compare
Psyr_4100 -1.1 -2.9 D-alanine--D-alanine ligase compare
Psyr_0046 -1.1 -3.1 conserved hypothetical protein compare
Psyr_2141 -1.1 -2.2 hypothetical protein compare
Psyr_0099 -1.1 -1.7 Conserved hypothetical protein compare
Psyr_1458 -1.1 -1.9 hypothetical protein compare
Psyr_1108 -1.0 -4.9 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_0571 -1.0 -2.2 tRNA isopentenyltransferase compare
Psyr_3290 -1.0 -2.1 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3954 -1.0 -3.1 GTP-binding protein LepA compare
Psyr_1748 -1.0 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1067 -1.0 -1.8 GTP cyclohydrolase subunit MoaC compare
Psyr_0511 -1.0 -2.1 conserved hypothetical protein compare
Psyr_2743 -1.0 -2.4 Lysine exporter protein (LYSE/YGGA) compare
Psyr_0915 -1.0 -5.8 NAD-dependent epimerase/dehydratase compare
Psyr_2581 -1.0 -3.1 FecR protein compare
Psyr_1614 -1.0 -1.8 lipid A biosynthesis acyltransferase compare
Psyr_1334 -1.0 -1.8 Cysteine desulfuration protein SufE compare
Psyr_3020 -1.0 -1.2 precorrin-4 C11-methyltransferase compare
Psyr_3135 -1.0 -1.6 transcriptional regulator, GntR family compare
Psyr_3600 -1.0 -1.1 transcriptional regulator, LysR family compare
Psyr_3287 -1.0 -1.3 DNA topoisomerase I compare
Psyr_2128 -1.0 -2.0 Protein of unknown function DUF6 compare
Psyr_3918 -1.0 -3.1 NUDIX hydrolase compare
Psyr_2150 -1.0 -1.9 protein of unknown function DUF903 compare
Psyr_4062 -1.0 -2.0 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_5133 -1.0 -2.3 tRNA modification GTPase trmE compare
Psyr_3127 -1.0 -2.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0276 -1.0 -1.9 zinc uptake regulation protein, putative compare
Psyr_1615 -1.0 -2.6 Patatin compare
Psyr_3179 -1.0 -1.9 DNA translocase FtsK compare
Psyr_1687 -1.0 -2.5 Rhomboid-like protein compare
Psyr_1910 -1.0 -3.1 VacJ-like lipoprotein compare
Psyr_1546 -1.0 -2.4 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_2226 -1.0 -2.7 formyltetrahydrofolate deformylase compare
Psyr_3014 -1.0 -2.0 protoporphyrin IX magnesium-chelatase compare
Psyr_0623 -0.9 -1.4 Peptidase S24, S26A and S26B compare
Psyr_0920 -0.9 -7.1 Glycosyl transferase, group 1 compare
Psyr_1670 -0.9 -1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_4128 -0.9 -4.6 sulfate adenylyltransferase subunit 2 compare
Psyr_4623 -0.9 -5.1 Aminoglycoside phosphotransferase compare
Psyr_0642 -0.9 -1.6 conserved hypothetical protein compare
Psyr_3450 -0.9 -2.9 Hpt compare
Psyr_0734 -0.9 -2.4 Protein of unknown function DUF159 compare
Psyr_1018 -0.9 -2.0 Protein of unknown function DUF1244 compare
Psyr_3905 -0.9 -3.9 glycerol kinase compare
Psyr_4136 -0.9 -1.7 BolA-like protein compare
Psyr_2752 -0.9 -1.6 conserved hypothetical protein compare
Psyr_0724 -0.9 -0.8 conserved hypothetical protein compare
Psyr_4051 -0.9 -1.6 transcriptional regulator, ArsR family compare
Psyr_4018 -0.9 -3.4 Formyltetrahydrofolate deformylase compare
Psyr_4579 -0.9 -2.8 indole-3-glycerol phosphate synthase compare
Psyr_3083 -0.9 -2.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3512 -0.9 -2.5 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_0630 -0.9 -2.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_3840 -0.9 -2.0 conserved hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment