Experiment set2IT081 for Bifidobacterium breve UCC2003

CDM1 without Riboflavin

Group: nutrient dropout
Media: CDM1 + no Riboflavin, pH=7
Culturing: Bifido_ML2, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Anthony Shiver on 12/10/2019
Growth plate: CDM1_nutrientdrop G9

Specific Phenotypes

For 1 genes in this experiment

For nutrient dropout no Riboflavin in Bifidobacterium breve UCC2003

For nutrient dropout no Riboflavin across organisms

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Lysine biosynthesis
• Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
L-lysine biosynthesis III	7	6	1
L-lysine biosynthesis VI	7	6	1
L-lysine biosynthesis I	9	9	1
L-lysine biosynthesis II	9	6	1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II	15	13	1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I	18	16	1
aspartate superpathway	25	23	1