Experiment set2IT079 for Methanococcus maripaludis JJ

Compare to:

Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.8 10.5 hypothetical protein compare
MMJJ_RS03185 +0.6 1.8 alanine--tRNA ligase compare
MMJJ_RS03410 +0.6 2.5 hypothetical protein compare
MMJJ_RS01590 +0.6 1.6 adenine phosphoribosyltransferase compare
MMJJ_RS01210 +0.6 2.3 hypothetical protein compare
MMJJ_RS03585 +0.5 0.9 methanogenesis marker 6 protein compare
MMJJ_RS04720 +0.5 1.0 IMP dehydrogenase compare
MMJJ_RS04375 +0.5 2.4 hypothetical protein compare
MMJJ_RS01100 +0.5 1.1 helix-turn-helix domain-containing protein compare
MMJJ_RS06880 +0.5 0.7 EhaG family protein compare
MMJJ_RS08775 +0.5 3.6 PfkB family carbohydrate kinase compare
MMJJ_RS06740 +0.4 2.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS07280 +0.4 3.2 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS05750 +0.4 3.4 flagellar accessory protein FlaH compare
MMJJ_RS08130 +0.4 0.5 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS05510 +0.4 3.0 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS05740 +0.4 3.5 archaellar assembly protein FlaJ compare
MMJJ_RS07030 +0.4 3.6 hypothetical protein compare
MMJJ_RS06975 +0.4 1.7 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS05820 +0.4 2.2 DUF2304 domain-containing protein compare
MMJJ_RS05760 +0.4 3.4 flagellar protein F compare
MMJJ_RS06470 +0.4 2.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS05505 +0.4 3.6 hypothetical protein compare
MMJJ_RS05870 +0.4 1.6 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS09295 +0.4 0.5 hypothetical protein compare
MMJJ_RS06130 +0.4 2.0 hypothetical protein compare
MMJJ_RS08765 +0.4 2.9 glycosyltransferase family 9 protein compare
MMJJ_RS08705 +0.3 2.7 AEC family transporter compare
MMJJ_RS07765 +0.3 2.1 DMT family protein compare
MMJJ_RS05745 +0.3 2.9 type II/IV secretion system ATPase subunit compare
MMJJ_RS08515 +0.3 1.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06800 +0.3 2.1 prefoldin subunit alpha compare
MMJJ_RS09205 +0.3 2.1 hypothetical protein compare
MMJJ_RS07690 +0.3 2.6 glycosyltransferase family 4 protein compare
MMJJ_RS08715 +0.3 1.9 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS08730 +0.3 2.6 glycosyltransferase family 4 protein compare
MMJJ_RS06520 +0.3 2.5 TldD/PmbA family protein compare
MMJJ_RS01530 +0.3 1.4 YwbE family protein compare
MMJJ_RS07495 +0.3 2.4 4Fe-4S binding protein compare
MMJJ_RS05980 +0.3 2.5 DUF5400 domain-containing protein compare
MMJJ_RS01060 +0.3 1.9 ABC transporter ATP-binding protein compare
MMJJ_RS04345 +0.3 1.2 DUF2080 family transposase-associated protein compare
MMJJ_RS05400 +0.3 2.0 CoA-binding protein compare
MMJJ_RS09390 +0.3 0.9 hypothetical protein compare
MMJJ_RS06710 +0.3 2.5 TldD/PmbA family protein compare
MMJJ_RS08040 +0.3 2.1 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06720 +0.3 2.1 mechanosensitive ion channel family protein compare
MMJJ_RS06460 +0.3 2.0 cytochrome c compare
MMJJ_RS06430 +0.3 2.0 haloacid dehalogenase compare
MMJJ_RS04780 +0.3 1.2 nucleic acid-binding protein compare
MMJJ_RS06810 +0.3 2.3 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS07865 +0.3 2.1 zinc ribbon domain-containing protein compare
MMJJ_RS03850 +0.3 2.0 nucleoside-diphosphate kinase compare
MMJJ_RS00420 +0.3 1.8 CBS domain-containing protein compare
MMJJ_RS06665 +0.3 1.3 DUF3236 domain-containing protein compare
MMJJ_RS02180 +0.3 1.6 DHH family phosphoesterase compare
MMJJ_RS05335 +0.3 1.6 heavy metal-binding domain-containing protein compare
MMJJ_RS08580 +0.2 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS06285 +0.2 1.8 YchF/TatD family DNA exonuclease compare
MMJJ_RS06585 +0.2 1.7 alanine racemase compare
MMJJ_RS07680 +0.2 1.7 glucose-6-phosphate isomerase compare
MMJJ_RS08760 +0.2 1.7 glycosyltransferase family 9 protein compare
MMJJ_RS06680 +0.2 1.6 DUF366 family protein compare
MMJJ_RS06790 +0.2 1.9 nucleotidyltransferase family protein compare
MMJJ_RS07910 +0.2 1.6 CBS domain-containing protein compare
MMJJ_RS06120 +0.2 1.7 DUF4013 domain-containing protein compare
MMJJ_RS04165 +0.2 1.7 sodium:solute symporter compare
MMJJ_RS05975 +0.2 1.4 sulfurtransferase TusA family protein compare
MMJJ_RS06280 +0.2 1.9 hypothetical protein compare
MMJJ_RS03835 +0.2 1.2 DUF504 domain-containing protein compare
MMJJ_RS07210 +0.2 1.7 AmmeMemoRadiSam system protein B compare
MMJJ_RS06080 +0.2 1.9 serine/threonine protein kinase compare
MMJJ_RS06770 +0.2 1.8 hypothetical protein compare
MMJJ_RS08125 +0.2 1.6 DNA double-strand break repair nuclease NurA compare
MMJJ_RS01125 +0.2 1.0 hypothetical protein compare
MMJJ_RS07235 +0.2 1.8 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07740 +0.2 1.6 DUF2334 domain-containing protein compare
MMJJ_RS08750 +0.2 1.8 glycosyltransferase compare
MMJJ_RS08470 +0.2 0.9 ferredoxin family protein compare
MMJJ_RS02310 +0.2 1.6 ABC transporter ATP-binding protein compare
MMJJ_RS09300 +0.2 0.7 hypothetical protein compare
MMJJ_RS06190 +0.2 1.7 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06745 +0.2 1.3 energy-coupling factor ABC transporter permease compare
MMJJ_RS05790 +0.2 1.7 flagellin compare
MMJJ_RS06445 +0.2 1.8 hypothetical protein compare
MMJJ_RS06455 +0.2 1.6 YeeE/YedE family protein compare
MMJJ_RS08720 +0.2 1.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS05755 +0.2 1.7 flagellar protein G compare
MMJJ_RS02980 +0.2 1.4 TatD family hydrolase compare
MMJJ_RS02880 +0.2 1.4 hypothetical protein compare
MMJJ_RS08740 +0.2 1.6 class I SAM-dependent methyltransferase compare
MMJJ_RS04175 +0.2 1.1 hypothetical protein compare
MMJJ_RS06450 +0.2 1.5 DUF3343 domain-containing protein compare
MMJJ_RS05890 +0.2 1.7 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS03345 +0.2 1.3 hypothetical protein compare
MMJJ_RS00755 +0.2 1.2 hypothetical protein compare
MMJJ_RS06465 +0.2 1.3 hypothetical protein compare
MMJJ_RS04830 +0.2 1.3 zinc dependent phospholipase C family protein compare
MMJJ_RS06100 +0.2 1.4 rubrerythrin compare
MMJJ_RS04510 +0.2 1.5 hypothetical protein compare
MMJJ_RS09065 +0.2 1.3 hypothetical protein compare
MMJJ_RS00115 +0.2 1.0 hypothetical protein compare
MMJJ_RS03510 +0.2 1.3 acyl-CoA dehydratase activase compare
MMJJ_RS03750 +0.2 1.3 rubredoxin compare
MMJJ_RS07905 +0.2 1.3 DUF89 domain-containing protein compare
MMJJ_RS06590 +0.2 1.4 sodium:alanine symporter family protein compare
MMJJ_RS05355 +0.2 1.3 DUF2121 domain-containing protein compare
MMJJ_RS07440 +0.2 1.5 metallophosphoesterase compare
MMJJ_RS04120 +0.2 1.3 amino acid ABC transporter ATP-binding protein compare
MMJJ_RS09325 +0.2 1.2 hypothetical protein compare
MMJJ_RS06085 +0.2 1.2 proteasome assembly chaperone family protein compare
MMJJ_RS06765 +0.2 1.5 hypothetical protein compare
MMJJ_RS07225 +0.2 1.2 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06055 +0.2 1.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS06640 +0.2 1.2 YfcE family phosphodiesterase compare
MMJJ_RS05525 +0.2 1.0 GTP-binding protein compare
MMJJ_RS03045 +0.2 1.2 hypothetical protein compare
MMJJ_RS06205 +0.2 1.3 EamA family transporter compare
MMJJ_RS06550 +0.2 1.3 ABC transporter permease compare
MMJJ_RS08160 +0.2 1.2 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS08655 +0.2 1.4 phospholipase D-like domain-containing protein compare
MMJJ_RS00335 +0.2 0.6 chemotaxis protein CheW compare
MMJJ_RS06515 +0.2 1.2 ribonuclease III compare
MMJJ_RS08365 +0.2 0.9 DsrE family protein compare
MMJJ_RS07185 +0.2 0.9 DUF371 domain-containing protein compare
MMJJ_RS01855 +0.2 1.3 MBL fold metallo-hydrolase compare
MMJJ_RS04270 +0.2 1.0 DUF364 domain-containing protein compare
MMJJ_RS07965 +0.2 0.9 hypothetical protein compare
MMJJ_RS05200 +0.2 1.3 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS01515 +0.2 0.9 DUF2178 domain-containing protein compare
MMJJ_RS03015 +0.2 1.2 Ig-like domain-containing protein compare
MMJJ_RS03935 +0.2 1.2 NAAT family transporter compare
MMJJ_RS06440 +0.2 1.1 DUF4870 domain-containing protein compare
MMJJ_RS06950 +0.2 1.1 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07380 +0.2 0.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS06105 +0.2 1.1 DUF99 family protein compare
MMJJ_RS06540 +0.1 0.7 DUF2120 domain-containing protein compare
MMJJ_RS09330 +0.1 0.9 hypothetical protein compare
MMJJ_RS03250 +0.1 0.6 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS07175 +0.1 1.3 DEAD/DEAH box helicase compare
MMJJ_RS04215 +0.1 1.3 DMT family transporter compare
MMJJ_RS05365 +0.1 0.9 DUF2798 domain-containing protein compare
MMJJ_RS07435 +0.1 1.2 SMC family ATPase compare
MMJJ_RS01395 +0.1 0.8 DUF1894 domain-containing protein compare
MMJJ_RS05280 +0.1 0.2 hypothetical protein compare
MMJJ_RS08350 +0.1 1.3 heavy metal translocating P-type ATPase compare
MMJJ_RS04745 +0.1 0.9 cyclase family protein compare
MMJJ_RS08295 +0.1 1.2 iron ABC transporter substrate-binding protein compare
MMJJ_RS04585 +0.1 1.1 phenylacetate--CoA ligase compare
MMJJ_RS07445 +0.1 1.0 RlmF-related methyltransferase compare
MMJJ_RS07215 +0.1 1.2 TIGR00341 family protein compare
MMJJ_RS02235 +0.1 1.1 DUF123 domain-containing protein compare
MMJJ_RS09370 +0.1 0.6 heavy-metal-associated domain-containing protein compare
MMJJ_RS05955 +0.1 1.1 radical SAM protein compare
MMJJ_RS05685 +0.1 0.8 class III signal peptide-containing protein compare
MMJJ_RS05900 +0.1 1.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS07850 +0.1 1.2 ATP-binding protein compare
MMJJ_RS07610 +0.1 0.8 DUF2119 domain-containing protein compare
MMJJ_RS08345 +0.1 1.1 flavodoxin family protein compare
MMJJ_RS00555 +0.1 0.9 hypothetical protein compare
MMJJ_RS03515 +0.1 0.9 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS06735 +0.1 1.1 cobalt ECF transporter T component CbiQ compare
MMJJ_RS06685 +0.1 1.2 S-layer protein compare
MMJJ_RS02860 +0.1 0.3 site-specific integrase compare
MMJJ_RS09255 +0.1 0.7 hypothetical protein compare
MMJJ_RS05915 +0.1 0.4 multiprotein bridging factor aMBF1 compare
MMJJ_RS01265 +0.1 0.5 cupin domain-containing protein compare
MMJJ_RS09215 +0.1 1.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS05985 +0.1 0.8 ABC transporter substrate-binding protein compare
MMJJ_RS04785 +0.1 0.9 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS04115 +0.1 1.0 HDIG domain-containing protein compare
MMJJ_RS00725 +0.1 0.9 LysE family translocator compare
MMJJ_RS00190 +0.1 0.8 hypothetical protein compare
MMJJ_RS07365 +0.1 1.0 CatB-related O-acetyltransferase compare
MMJJ_RS07240 +0.1 1.1 MBL fold metallo-hydrolase compare
MMJJ_RS06160 +0.1 0.9 stage II sporulation protein M compare
MMJJ_RS02080 +0.1 1.1 AMP-binding protein compare
MMJJ_RS07590 +0.1 0.9 flap endonuclease-1 compare
MMJJ_RS03945 +0.1 0.9 mechanosensitive ion channel family protein compare
MMJJ_RS04085 +0.1 0.9 class III signal peptide-containing protein compare
MMJJ_RS04430 +0.1 1.0 purine NTPase compare
MMJJ_RS04925 +0.1 0.9 cation:proton antiporter compare
MMJJ_RS05690 +0.1 1.1 hypothetical protein compare
MMJJ_RS04625 +0.1 0.9 SLC13 family permease compare
MMJJ_RS09380 +0.1 0.3 hypothetical protein compare
MMJJ_RS06555 +0.1 0.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS05405 +0.1 0.9 DNA cytosine methyltransferase compare
MMJJ_RS04070 +0.1 1.1 DUF2341 domain-containing protein compare
MMJJ_RS01380 +0.1 0.8 DUF1890 domain-containing protein compare
MMJJ_RS00945 +0.1 1.0 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS04240 +0.1 1.0 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS04055 +0.1 0.5 hypothetical protein compare
MMJJ_RS07485 +0.1 0.7 DedA family protein compare
MMJJ_RS08710 +0.1 0.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS06135 +0.1 0.9 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS03360 +0.1 0.2 hypothetical protein compare
MMJJ_RS09200 +0.1 1.0 Nre family DNA repair protein compare
MMJJ_RS07260 +0.1 0.9 PspC domain-containing protein compare
MMJJ_RS03445 +0.1 0.7 hypothetical protein compare
MMJJ_RS07645 +0.1 0.8 selenium-binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms