Experiment set2IT078 for Methanococcus maripaludis JJ

Compare to:

Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.8 11.3 hypothetical protein compare
MMJJ_RS01785 +0.8 1.4 50S ribosomal protein L14e compare
MMJJ_RS04720 +0.8 1.1 IMP dehydrogenase compare
MMJJ_RS07030 +0.7 5.9 hypothetical protein compare
MMJJ_RS08775 +0.6 4.8 PfkB family carbohydrate kinase compare
MMJJ_RS08785 +0.6 3.7 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS08765 +0.6 5.3 glycosyltransferase family 9 protein compare
MMJJ_RS01590 +0.6 1.0 adenine phosphoribosyltransferase compare
MMJJ_RS08715 +0.6 3.2 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS06800 +0.5 3.2 prefoldin subunit alpha compare
MMJJ_RS09295 +0.5 0.7 hypothetical protein compare
MMJJ_RS05820 +0.5 2.3 DUF2304 domain-containing protein compare
MMJJ_RS08760 +0.5 3.9 glycosyltransferase family 9 protein compare
MMJJ_RS05870 +0.5 1.7 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS08730 +0.5 4.1 glycosyltransferase family 4 protein compare
MMJJ_RS07280 +0.5 3.3 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS05760 +0.5 4.1 flagellar protein F compare
MMJJ_RS06130 +0.5 2.7 hypothetical protein compare
MMJJ_RS04480 +0.4 1.8 hypothetical protein compare
MMJJ_RS08040 +0.4 3.5 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS00420 +0.4 2.8 CBS domain-containing protein compare
MMJJ_RS05510 +0.4 3.3 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS08720 +0.4 3.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS05740 +0.4 3.7 archaellar assembly protein FlaJ compare
MMJJ_RS09325 +0.4 2.7 hypothetical protein compare
MMJJ_RS08515 +0.4 1.9 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06665 +0.4 2.2 DUF3236 domain-containing protein compare
MMJJ_RS06975 +0.4 1.3 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08750 +0.4 3.5 glycosyltransferase compare
MMJJ_RS00525 +0.4 1.0 Dabb family protein compare
MMJJ_RS05750 +0.4 3.2 flagellar accessory protein FlaH compare
MMJJ_RS07680 +0.4 3.1 glucose-6-phosphate isomerase compare
MMJJ_RS05745 +0.4 3.3 type II/IV secretion system ATPase subunit compare
MMJJ_RS05790 +0.4 2.8 flagellin compare
MMJJ_RS03370 +0.4 1.7 hypothetical protein compare
MMJJ_RS05915 +0.4 1.2 multiprotein bridging factor aMBF1 compare
MMJJ_RS05505 +0.4 3.6 hypothetical protein compare
MMJJ_RS09370 +0.4 1.4 heavy-metal-associated domain-containing protein compare
MMJJ_RS05560 +0.3 1.5 30S ribosomal protein S27e compare
MMJJ_RS08780 +0.3 2.1 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS05755 +0.3 2.8 flagellar protein G compare
MMJJ_RS08710 +0.3 2.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS06740 +0.3 2.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS01100 +0.3 0.8 helix-turn-helix domain-containing protein compare
MMJJ_RS00415 +0.3 1.6 DedA family protein compare
MMJJ_RS08580 +0.3 1.7 YkgJ family cysteine cluster protein compare
MMJJ_RS06765 +0.3 2.6 hypothetical protein compare
MMJJ_RS07690 +0.3 2.3 glycosyltransferase family 4 protein compare
MMJJ_RS03835 +0.3 1.7 DUF504 domain-containing protein compare
MMJJ_RS05785 +0.3 2.2 flagellin compare
MMJJ_RS06190 +0.3 2.4 7-cyano-7-deazaguanine synthase compare
MMJJ_RS07610 +0.3 1.8 DUF2119 domain-containing protein compare
MMJJ_RS00950 +0.3 1.8 DUF111 family protein compare
MMJJ_RS03850 +0.3 1.7 nucleoside-diphosphate kinase compare
MMJJ_RS06205 +0.3 2.0 EamA family transporter compare
MMJJ_RS06810 +0.3 2.3 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06430 +0.3 2.1 haloacid dehalogenase compare
MMJJ_RS03410 +0.3 1.0 hypothetical protein compare
MMJJ_RS06735 +0.3 2.0 cobalt ECF transporter T component CbiQ compare
MMJJ_RS04375 +0.3 1.3 hypothetical protein compare
MMJJ_RS09380 +0.3 1.2 hypothetical protein compare
MMJJ_RS08325 +0.2 0.5 glycosyltransferase family 2 protein compare
MMJJ_RS09255 +0.2 1.0 hypothetical protein compare
MMJJ_RS02965 +0.2 1.5 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS03185 +0.2 0.5 alanine--tRNA ligase compare
MMJJ_RS06480 +0.2 1.8 hypothetical protein compare
MMJJ_RS06505 +0.2 1.1 prephenate dehydratase compare
MMJJ_RS04165 +0.2 2.0 sodium:solute symporter compare
MMJJ_RS04175 +0.2 1.6 hypothetical protein compare
MMJJ_RS03360 +0.2 0.4 hypothetical protein compare
MMJJ_RS06770 +0.2 2.0 hypothetical protein compare
MMJJ_RS05115 +0.2 1.0 P-II family nitrogen regulator compare
MMJJ_RS06105 +0.2 1.8 DUF99 family protein compare
MMJJ_RS04585 +0.2 1.7 phenylacetate--CoA ligase compare
MMJJ_RS07040 +0.2 0.3 preprotein translocase subunit SecY compare
MMJJ_RS07865 +0.2 1.8 zinc ribbon domain-containing protein compare
MMJJ_RS06710 +0.2 1.8 TldD/PmbA family protein compare
MMJJ_RS03070 +0.2 1.1 MetS family NSS transporter small subunit compare
MMJJ_RS02290 +0.2 1.6 MarR family transcriptional regulator compare
MMJJ_RS05890 +0.2 1.8 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS06585 +0.2 1.5 alanine racemase compare
MMJJ_RS07595 +0.2 1.1 hypothetical protein compare
MMJJ_RS06470 +0.2 1.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS05980 +0.2 1.6 DUF5400 domain-containing protein compare
MMJJ_RS04780 +0.2 1.0 nucleic acid-binding protein compare
MMJJ_RS08705 +0.2 1.6 AEC family transporter compare
MMJJ_RS02245 +0.2 1.4 DUF432 domain-containing protein compare
MMJJ_RS00300 +0.2 1.4 chemotaxis protein CheC compare
MMJJ_RS03350 +0.2 0.6 hypothetical protein compare
MMJJ_RS01060 +0.2 1.4 ABC transporter ATP-binding protein compare
MMJJ_RS07220 +0.2 1.6 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS07450 +0.2 1.0 hypothetical protein compare
MMJJ_RS03545 +0.2 1.5 flagella protein F compare
MMJJ_RS08830 +0.2 1.0 hypothetical protein compare
MMJJ_RS05985 +0.2 1.3 ABC transporter substrate-binding protein compare
MMJJ_RS06520 +0.2 1.5 TldD/PmbA family protein compare
MMJJ_RS04215 +0.2 1.6 DMT family transporter compare
MMJJ_RS06455 +0.2 1.5 YeeE/YedE family protein compare
MMJJ_RS06790 +0.2 1.6 nucleotidyltransferase family protein compare
MMJJ_RS06160 +0.2 1.4 stage II sporulation protein M compare
MMJJ_RS06115 +0.2 1.5 pyruvate kinase compare
MMJJ_RS07235 +0.2 1.5 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS03045 +0.2 1.5 hypothetical protein compare
MMJJ_RS02860 +0.2 0.5 site-specific integrase compare
MMJJ_RS06045 +0.2 1.4 hypothetical protein compare
MMJJ_RS07795 +0.2 1.3 cupin domain-containing protein compare
MMJJ_RS05975 +0.2 1.3 sulfurtransferase TusA family protein compare
MMJJ_RS05200 +0.2 1.5 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS07860 +0.2 1.2 hypothetical protein compare
MMJJ_RS02345 +0.2 1.4 ATP-binding protein compare
MMJJ_RS02355 +0.2 1.5 DUF2798 domain-containing protein compare
MMJJ_RS07935 +0.2 0.3 protein fwdD compare
MMJJ_RS06640 +0.2 1.3 YfcE family phosphodiesterase compare
MMJJ_RS07210 +0.2 1.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS02115 +0.2 1.3 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS08345 +0.2 1.4 flavodoxin family protein compare
MMJJ_RS02110 +0.2 0.9 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS02340 +0.2 1.1 SAM-dependent methyltransferase compare
MMJJ_RS07225 +0.2 1.3 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS04690 +0.2 1.4 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS07230 +0.2 1.1 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS00115 +0.2 0.8 hypothetical protein compare
MMJJ_RS04755 +0.2 1.2 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS09265 +0.2 0.5 hypothetical protein compare
MMJJ_RS07825 +0.2 0.8 YciI family protein compare
MMJJ_RS04745 +0.2 1.1 cyclase family protein compare
MMJJ_RS06660 +0.2 1.1 DUF1188 domain-containing protein compare
MMJJ_RS05335 +0.2 0.9 heavy metal-binding domain-containing protein compare
MMJJ_RS06580 +0.2 1.3 alanine dehydrogenase compare
MMJJ_RS06720 +0.2 1.2 mechanosensitive ion channel family protein compare
MMJJ_RS03590 +0.1 1.0 restriction endonuclease compare
MMJJ_RS04300 +0.1 1.1 hypothetical protein compare
MMJJ_RS04180 +0.1 0.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS00790 +0.1 0.9 ribonuclease H family protein compare
MMJJ_RS06280 +0.1 1.3 hypothetical protein compare
MMJJ_RS03945 +0.1 1.1 mechanosensitive ion channel family protein compare
MMJJ_RS05235 +0.1 1.3 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS09230 +0.1 0.8 hypothetical protein compare
MMJJ_RS03690 +0.1 1.0 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS08370 +0.1 0.7 hypothetical protein compare
MMJJ_RS04430 +0.1 1.2 purine NTPase compare
MMJJ_RS03385 +0.1 0.9 hypothetical protein compare
MMJJ_RS08295 +0.1 1.2 iron ABC transporter substrate-binding protein compare
MMJJ_RS06550 +0.1 1.2 ABC transporter permease compare
MMJJ_RS06460 +0.1 1.0 cytochrome c compare
MMJJ_RS00400 +0.1 0.7 tautomerase family protein compare
MMJJ_RS06685 +0.1 1.2 S-layer protein compare
MMJJ_RS07025 +0.1 0.8 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07385 +0.1 1.0 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS06445 +0.1 1.2 hypothetical protein compare
MMJJ_RS05525 +0.1 0.8 GTP-binding protein compare
MMJJ_RS08490 +0.1 0.6 rubrerythrin family protein compare
MMJJ_RS07740 +0.1 1.0 DUF2334 domain-containing protein compare
MMJJ_RS05250 +0.1 0.9 HDIG domain-containing protein compare
MMJJ_RS06120 +0.1 1.0 DUF4013 domain-containing protein compare
MMJJ_RS01125 +0.1 0.9 hypothetical protein compare
MMJJ_RS05585 +0.1 0.9 hypothetical protein compare
MMJJ_RS05500 +0.1 1.2 hypothetical protein compare
MMJJ_RS03355 +0.1 1.0 hypothetical protein compare
MMJJ_RS07915 +0.1 0.9 CBS domain-containing protein compare
MMJJ_RS08365 +0.1 0.7 DsrE family protein compare
MMJJ_RS09390 +0.1 0.6 hypothetical protein compare
MMJJ_RS04250 +0.1 0.7 thioredoxin family protein compare
MMJJ_RS03750 +0.1 0.9 rubredoxin compare
MMJJ_RS00695 +0.1 1.0 P-II family nitrogen regulator compare
MMJJ_RS01840 +0.1 0.8 flavodoxin family protein compare
MMJJ_RS08885 +0.1 0.9 cysteine--tRNA ligase compare
MMJJ_RS01615 +0.1 0.6 MoaD/ThiS family protein compare
MMJJ_RS01525 +0.1 1.0 ketopantoate reductase family protein compare
MMJJ_RS01770 +0.1 0.7 TOBE domain-containing protein compare
MMJJ_RS06440 +0.1 0.8 DUF4870 domain-containing protein compare
MMJJ_RS01740 +0.1 0.9 ATP-binding protein compare
MMJJ_RS05240 +0.1 1.1 type II secretion system F family protein compare
MMJJ_RS05685 +0.1 0.8 class III signal peptide-containing protein compare
MMJJ_RS07480 +0.1 1.0 FAD-dependent oxidoreductase compare
MMJJ_RS01035 +0.1 0.5 hypothetical protein compare
MMJJ_RS01945 +0.1 0.6 cell division ATPase MinD compare
MMJJ_RS05400 +0.1 0.6 CoA-binding protein compare
MMJJ_RS01405 +0.1 0.2 proline--tRNA ligase compare
MMJJ_RS07270 +0.1 0.8 ribonuclease HII compare
MMJJ_RS03285 +0.1 0.5 gamma-glutamylcyclotransferase compare
MMJJ_RS06960 +0.1 1.0 CAP domain-containing protein compare
MMJJ_RS08075 +0.1 0.9 ATP-dependent DNA helicase compare
MMJJ_RS07835 +0.1 0.8 UPF0489 family protein compare
MMJJ_RS07630 +0.1 0.8 hypothetical protein compare
MMJJ_RS05970 +0.1 0.4 MJ0307 family thioredoxin compare
MMJJ_RS00870 +0.1 0.7 F420-nonreducing hydrogenase compare
MMJJ_RS05340 +0.1 0.8 AAA family ATPase compare
MMJJ_RS04750 +0.1 0.7 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS07255 +0.1 1.0 hypothetical protein compare
MMJJ_RS06135 +0.1 0.8 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS09355 +0.1 0.5 hypothetical protein compare
MMJJ_RS01505 +0.1 0.6 DUF2124 domain-containing protein compare
MMJJ_RS04785 +0.1 0.7 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS06515 +0.1 0.8 ribonuclease III compare
MMJJ_RS05405 +0.1 0.8 DNA cytosine methyltransferase compare
MMJJ_RS07445 +0.1 0.7 RlmF-related methyltransferase compare
MMJJ_RS08015 +0.1 0.7 HAD family hydrolase compare
MMJJ_RS03885 +0.1 0.8 tetratricopeptide repeat protein compare
MMJJ_RS06950 +0.1 0.8 4-demethylwyosine synthase TYW1 compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in rich t1 experiments