Experiment set2IT077 for Pantoea sp. MT58

Compare to:

Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

200 most important genes:

  gene name fitness t score description  
IAI47_13685 -9.2 -6.4 Tol-Pal system protein TolB compare
IAI47_00910 -6.4 -7.6 acetylglutamate kinase compare
IAI47_00915 -6.3 -14.7 argininosuccinate synthase compare
IAI47_16010 -6.3 -12.8 3-isopropylmalate dehydratase large subunit compare
IAI47_07090 -6.3 -7.5 histidinol dehydrogenase compare
IAI47_01035 -6.2 -18.7 dihydroxy-acid dehydratase compare
IAI47_17225 -6.2 -18.7 sulfite reductase subunit alpha compare
IAI47_01040 -6.1 -12.5 threonine ammonia-lyase, biosynthetic compare
IAI47_15635 -6.1 -5.8 RNA polymerase-binding protein DksA compare
IAI47_12645 -6.1 -11.2 porin OmpA compare
IAI47_01030 -6.1 -15.3 branched-chain amino acid transaminase compare
IAI47_16120 -6.0 -10.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_01050 -6.0 -14.6 ketol-acid reductoisomerase compare
IAI47_17220 -6.0 -24.5 glutamate synthase large subunit compare
IAI47_16205 -6.0 -7.1 threonine synthase compare
IAI47_00920 -6.0 -15.9 argininosuccinate lyase compare
IAI47_03975 -5.9 -15.2 amino-acid N-acetyltransferase compare
IAI47_07065 -5.9 -11.3 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_03860 -5.9 -11.3 diaminopimelate decarboxylase compare
IAI47_16215 -5.9 -16.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_00880 -5.9 -15.6 cystathionine gamma-synthase compare
IAI47_09185 -5.8 -5.7 glutamine amidotransferase compare
IAI47_18015 -5.8 -14.1 homoserine O-succinyltransferase compare
IAI47_09180 -5.8 -9.7 anthranilate phosphoribosyltransferase compare
IAI47_00905 -5.8 -15.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_16350 -5.7 -7.9 phosphoserine phosphatase compare
IAI47_07060 -5.7 -12.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_07085 -5.7 -14.8 histidinol-phosphate transaminase compare
IAI47_16830 -5.7 -14.8 ornithine carbamoyltransferase compare
IAI47_16015 -5.7 -6.8 3-isopropylmalate dehydratase small subunit compare
IAI47_07080 -5.7 -7.8 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_00895 -5.7 -20.9 phosphoenolpyruvate carboxylase compare
IAI47_09175 -5.7 -10.9 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_04895 -5.7 -3.9 pyridoxine 5'-phosphate synthase compare
IAI47_16210 -5.6 -15.5 homoserine kinase compare
IAI47_16005 -5.6 -12.6 3-isopropylmalate dehydrogenase compare
IAI47_16115 -5.6 -22.5 carbamoyl-phosphate synthase large subunit compare
IAI47_07075 -5.6 -8.5 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_06235 -5.6 -5.4 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_07070 -5.3 -8.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_13690 -5.3 -2.2 cell envelope integrity protein TolA compare
IAI47_16080 -5.3 -8.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_13900 -5.2 -18.9 asparagine synthase B compare
IAI47_03725 -5.2 -14.0 phosphoglycerate dehydrogenase compare
IAI47_09190 -5.2 -14.0 anthranilate synthase component 1 compare
IAI47_18040 -5.1 -22.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_09170 -5.0 -10.8 tryptophan synthase subunit beta compare
IAI47_09165 -5.0 -6.0 tryptophan synthase subunit alpha compare
IAI47_15120 -5.0 -4.9 glutamate 5-kinase compare
IAI47_13770 -4.9 -8.2 citrate synthase compare
IAI47_16870 -4.9 -10.7 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_13695 -4.9 -2.0 colicin uptake protein TolR compare
IAI47_16000 -4.9 -22.9 2-isopropylmalate synthase compare
IAI47_09040 -4.8 -5.3 NAD-dependent epimerase compare
IAI47_07095 -4.8 -14.2 ATP phosphoribosyltransferase compare
IAI47_15115 -4.7 -9.1 glutamate-5-semialdehyde dehydrogenase compare
IAI47_17185 -4.6 -3.2 RNA polymerase factor sigma-54 compare
IAI47_05180 -4.6 -18.6 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_14350 -4.5 -10.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_05275 -4.4 -9.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_00655 -4.4 -9.3 glycosyltransferase family 4 protein compare
IAI47_12865 -4.4 -12.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_18045 -4.3 -16.2 phosphoribosylamine--glycine ligase compare
IAI47_00455 -4.3 -15.7 nitrogen regulation protein NR(II) compare
IAI47_06275 -4.2 -22.9 amidophosphoribosyltransferase compare
IAI47_00770 -4.1 -1.7 general stress protein compare
IAI47_04160 -4.1 -17.6 phosphoadenylyl-sulfate reductase compare
IAI47_00780 -4.1 -2.8 6-phosphofructokinase compare
IAI47_08085 -4.0 -8.9 helix-turn-helix domain-containing protein compare
IAI47_04930 -4.0 -24.1 phosphoribosylformylglycinamidine synthase compare
IAI47_14945 -3.9 -2.7 pyrroline-5-carboxylate reductase compare
IAI47_00450 -3.9 -18.5 nitrogen regulation protein NR(I) compare
IAI47_04410 -3.9 -17.2 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_11450 -3.8 -11.3 ankyrin repeat domain-containing protein compare
IAI47_15110 -3.7 -9.9 chromophore lyase compare
IAI47_00460 -3.7 -2.5 glutamate--ammonia ligase compare
IAI47_09010 -3.6 -10.9 formyltetrahydrofolate deformylase compare
IAI47_09240 -3.6 -2.4 HTH-type transcriptional regulator CysB compare
IAI47_12215 -3.5 -14.9 dihydroorotase compare
IAI47_03855 -3.5 -8.1 LysR family transcriptional regulator compare
IAI47_10520 -3.4 -5.2 pyridoxamine 5'-phosphate oxidase compare
IAI47_13180 -3.4 -10.7 manganese-binding transcriptional regulator MntR compare
IAI47_12705 -3.2 -15.4 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_13050 -3.2 -6.2 YbjN domain-containing protein compare
IAI47_05070 -3.2 -1.8 outer membrane protein assembly factor BamB compare
IAI47_16220 -3.2 -6.2 thr operon leader peptide compare
IAI47_14355 -3.1 -12.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_01365 -3.1 -2.1 inorganic phosphate transporter PitA compare
IAI47_18530 -3.1 -4.4 thioredoxin TrxA compare
IAI47_04190 -3.0 -8.3 adenylyl-sulfate kinase compare
IAI47_04120 -2.8 -16.2 GTP diphosphokinase compare
IAI47_05420 -2.8 -2.5 PTS glucose transporter subunit IIA compare
IAI47_16860 -2.7 -14.8 aspartate carbamoyltransferase compare
IAI47_09245 -2.7 -5.7 YmiA family putative membrane protein compare
IAI47_00900 -2.7 -14.2 acetylornithine deacetylase compare
IAI47_12915 -2.6 -11.2 leucine-responsive transcriptional regulator Lrp compare
IAI47_02695 -2.6 -13.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_00600 -2.6 -10.2 orotate phosphoribosyltransferase compare
IAI47_00300 -2.6 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_15540 -2.5 -11.4 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_07165 -2.4 -3.1 exodeoxyribonuclease I compare
IAI47_03375 -2.4 -11.4 peptide chain release factor 3 compare
IAI47_09275 -2.4 -9.6 orotidine-5'-phosphate decarboxylase compare
IAI47_15810 -2.4 -3.9 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI47_18595 -2.4 -14.1 endoglucanase compare
IAI47_17000 -2.3 -11.6 lipoprotein NlpI compare
IAI47_00465 -2.3 -4.9 ribosome-dependent GTPase TypA compare
IAI47_08355 -2.3 -5.0 flagellar protein FlhE compare
IAI47_18315 -2.3 -8.0 HTH-type transcriptional regulator MetR compare
IAI47_13745 -2.3 -4.4 2-oxoglutarate dehydrogenase E1 component compare
IAI47_21765 -2.3 -2.2 YoeB-YefM toxin-antitoxin system antitoxin YefM compare
IAI47_05465 -2.3 -6.3 bile acid:sodium symporter compare
IAI47_04155 -2.2 -12.2 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_02090 -2.2 -5.5 elongation factor Tu compare
IAI47_00735 -2.1 -3.2 protein-export chaperone SecB compare
IAI47_18830 -2.1 -1.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_17965 -2.1 -11.6 glucose-6-phosphate isomerase compare
IAI47_01955 -2.1 -11.9 aspartate aminotransferase family protein compare
IAI47_09305 -2.1 -4.1 cyclic di-GMP phosphodiesterase compare
IAI47_05440 -2.0 -9.6 cysteine synthase A compare
IAI47_12410 -2.0 -5.2 MarR family transcriptional regulator compare
IAI47_04150 -2.0 -11.8 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_04505 -1.9 -8.8 transcriptional repressor MprA compare
IAI47_11760 -1.9 -2.3 TonB-dependent siderophore receptor compare
IAI47_18410 -1.9 -6.3 diaminopimelate epimerase compare
IAI47_13740 -1.9 -1.6 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
IAI47_04835 -1.9 -7.9 ATP-dependent RNA helicase SrmB compare
IAI47_03595 -1.9 -7.6 YggS family pyridoxal phosphate-dependent enzyme compare
IAI47_21690 -1.9 -8.1 TetR/AcrR family transcriptional regulator compare
IAI47_13700 -1.9 -3.4 Tol-Pal system protein TolQ compare
IAI47_18145 -1.8 -3.2 elongation factor Tu compare
IAI47_06980 -1.8 -4.4 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_16095 -1.8 -5.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
IAI47_17005 -1.7 -8.2 polyribonucleotide nucleotidyltransferase compare
IAI47_06415 -1.7 -4.6 NADH-quinone oxidoreductase subunit M compare
IAI47_06245 -1.7 -4.7 tRNA pseudouridine(38-40) synthase TruA compare
IAI47_03685 -1.7 -8.6 erythrose-4-phosphate dehydrogenase compare
IAI47_17580 -1.7 -10.2 hypothetical protein compare
IAI47_08445 -1.6 -1.4 Holliday junction branch migration protein RuvA compare
IAI47_15595 -1.6 -2.3 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_10320 -1.6 -1.3 Rrf2 family transcriptional regulator compare
IAI47_01045 -1.6 -5.3 HTH-type transcriptional activator IlvY compare
IAI47_03550 -1.6 -9.5 membrane-bound lytic murein transglycosylase MltC compare
IAI47_08705 -1.6 -11.4 carboxy terminal-processing peptidase compare
IAI47_03820 -1.6 -4.4 site-specific tyrosine recombinase XerD compare
IAI47_06135 -1.6 -4.4 phosphohistidine phosphatase SixA compare
IAI47_12060 -1.6 -4.5 beta-ketoacyl-ACP synthase II compare
IAI47_04400 -1.5 -5.8 3-deoxy-7-phosphoheptulonate synthase compare
IAI47_00890 -1.5 -7.6 methylenetetrahydrofolate reductase compare
IAI47_03680 -1.5 -9.0 transketolase compare
IAI47_09235 -1.5 -1.8 type I DNA topoisomerase compare
IAI47_12110 -1.4 -3.5 ribonuclease E compare
IAI47_13065 -1.4 -2.1 DUF1418 family protein compare
IAI47_06115 -1.4 -10.4 long-chain fatty acid transporter FadL compare
IAI47_14690 -1.4 -6.1 cytochrome o ubiquinol oxidase subunit III compare
IAI47_09360 -1.3 -1.3 peptide ABC transporter ATP-binding protein SapF compare
IAI47_10925 -1.3 -3.7 EAL domain-containing protein compare
IAI47_08450 -1.3 -3.5 Holliday junction branch migration DNA helicase RuvB compare
IAI47_17020 -1.3 -3.2 30S ribosome-binding factor RbfA compare
IAI47_18215 -1.3 -1.3 Trk system potassium transporter TrkH compare
IAI47_10840 -1.3 -4.0 pyruvate kinase PykF compare
IAI47_11310 -1.3 -3.9 redox-regulated ATPase YchF compare
IAI47_06390 -1.3 -2.8 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_04175 -1.3 -7.1 uroporphyrinogen-III C-methyltransferase compare
IAI47_13935 -1.3 -1.7 tRNA-Gln compare
IAI47_18715 -1.2 -2.2 YibL family ribosome-associated protein compare
IAI47_03610 -1.2 -5.1 YqgE/AlgH family protein compare
IAI47_10775 -1.2 -4.7 ribonuclease T compare
IAI47_13310 -1.2 -4.8 MerR family transcriptional regulator compare
IAI47_05425 -1.2 -3.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_09210 -1.2 -5.8 23S rRNA pseudouridine(2605) synthase RluB compare
IAI47_04870 -1.2 -5.5 elongation factor 4 compare
IAI47_06365 -1.2 -3.3 NADH-quinone oxidoreductase subunit B compare
IAI47_18815 -1.1 -6.3 4'-phosphopantetheinyl transferase superfamily protein compare
IAI47_08135 -1.1 -6.5 flagellar export chaperone FliS compare
IAI47_02350 -1.1 -1.3 tRNA-Thr compare
IAI47_05150 -1.1 -6.0 exopolyphosphatase compare
IAI47_01780 -1.1 -2.2 Fe-S biogenesis protein NfuA compare
IAI47_02585 -1.1 -2.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
IAI47_01025 -1.1 -4.9 acetolactate synthase 2 small subunit compare
IAI47_12030 -1.1 -7.5 PTS glucose transporter subunit IIBC compare
IAI47_12275 -1.0 -8.8 glucans biosynthesis glucosyltransferase MdoH compare
IAI47_08435 -1.0 -1.9 YebC/PmpR family DNA-binding transcriptional regulator compare
IAI47_13635 -1.0 -5.6 quinolinate synthase NadA compare
IAI47_17900 -1.0 -1.4 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
IAI47_04185 -1.0 -7.9 sulfate adenylyltransferase subunit CysN compare
IAI47_13755 -1.0 -5.4 succinate dehydrogenase flavoprotein subunit compare
IAI47_18400 -1.0 -1.8 tyrosine recombinase XerC compare
IAI47_06270 -1.0 -5.5 colicin V production protein compare
IAI47_15155 -1.0 -3.9 DUF943 family protein compare
IAI47_14730 -1.0 -1.2 exodeoxyribonuclease VII small subunit compare
IAI47_10725 -1.0 -2.7 DUF1656 domain-containing protein compare
IAI47_13765 -0.9 -2.3 succinate dehydrogenase cytochrome b556 subunit compare
IAI47_04180 -0.9 -6.2 sulfate adenylyltransferase subunit CysD compare
IAI47_16995 -0.9 -2.1 protein YrbN compare
IAI47_05580 -0.9 -1.4 membrane protein YpdK compare
IAI47_18435 -0.9 -7.6 uroporphyrinogen-III C-methyltransferase compare
IAI47_12175 -0.9 -1.6 anti-sigma-28 factor FlgM compare
IAI47_18240 -0.9 -1.8 NAD(P)H-flavin reductase compare
IAI47_18520 -0.9 -8.2 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Aluminum potassium sulfate dodecahydrate across organisms