Experiment set2IT076 for Pantoea sp. MT58

Compare to:

Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_07000 +1.4 10.4 UDP-glucose 4-epimerase GalE compare
IAI47_17895 +1.4 8.3 diacylglycerol kinase compare
IAI47_03645 +1.4 12.5 O-antigen ligase family protein compare
IAI47_16420 +1.4 11.5 LacI family DNA-binding transcriptional regulator compare
IAI47_03640 +1.3 11.9 glycosyltransferase compare
IAI47_00670 +1.3 11.7 sugar glycosyltransferase compare
IAI47_13950 +1.2 1.5 PhoH family protein compare
IAI47_13155 +1.1 2.2 H-NS histone family protein compare
IAI47_04110 +1.1 10.6 two-component sensor histidine kinase BarA compare
IAI47_12470 +1.1 9.2 UvrY/SirA/GacA family response regulator transcription factor compare
IAI47_06455 +1.1 5.8 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_07020 +1.1 1.4 hypothetical protein compare
IAI47_15485 +1.1 1.6 molecular chaperone Skp compare
IAI47_10845 +1.0 4.3 major outer membrane lipoprotein compare
IAI47_18470 +1.0 9.0 ECA oligosaccharide polymerase compare
IAI47_10825 +1.0 2.4 tRNA-Val compare
IAI47_06250 +1.0 7.0 DedA family protein compare
IAI47_05765 +0.9 2.3 hypothetical protein compare
IAI47_11375 +0.9 1.7 hypothetical protein compare
IAI47_05510 +0.9 6.6 putative DNA-binding transcriptional regulator compare
IAI47_21335 +0.9 3.1 RepB family plasmid replication initiator protein compare
IAI47_18480 +0.9 6.7 lipid III flippase WzxE compare
IAI47_07965 +0.9 4.2 transcriptional regulator RcsA compare
IAI47_00770 +0.9 1.1 general stress protein compare
IAI47_05745 +0.8 2.3 protease FtsH-inhibitory lysogeny factor CIII compare
IAI47_08960 +0.8 5.2 bifunctional nicotinamidase/pyrazinamidase compare
IAI47_12305 +0.8 5.0 hypothetical protein compare
IAI47_08455 +0.8 5.2 zinc ABC transporter permease subunit ZnuB compare
IAI47_02465 +0.8 6.6 metalloprotease TldD compare
IAI47_14910 +0.7 4.0 recombination-associated protein RdgC compare
IAI47_12480 +0.7 5.4 autoinducer synthase compare
IAI47_02895 +0.7 6.1 DedA family protein compare
IAI47_00930 +0.7 5.1 DNA-binding transcriptional regulator OxyR compare
IAI47_06450 +0.7 3.0 ribonucleotide-diphosphate reductase subunit beta compare
IAI47_06565 +0.7 1.4 YejL family protein compare
IAI47_16415 +0.7 5.0 nucleoside hydrolase compare
IAI47_07930 +0.7 1.2 DUF2158 domain-containing protein compare
IAI47_05830 +0.6 2.7 hypothetical protein compare
IAI47_02835 +0.6 4.0 DnaA initiator-associating protein DiaA compare
IAI47_08010 +0.6 3.2 flagella biosynthesis chaperone FliJ compare
IAI47_00835 +0.6 2.9 cell division protein ZapB compare
IAI47_13885 +0.6 1.2 N-acetylglucosamine-6-phosphate deacetylase compare
IAI47_21505 +0.6 1.8 DUF2256 domain-containing protein compare
IAI47_02765 +0.6 4.7 metalloprotease PmbA compare
IAI47_16955 +0.6 3.5 N-acetyltransferase compare
IAI47_12980 +0.6 2.7 N-acetylmuramoyl-L-alanine amidase compare
IAI47_18495 +0.6 3.6 glucose-1-phosphate thymidylyltransferase RfbA compare
IAI47_08465 +0.6 4.3 zinc ABC transporter substrate-binding protein ZnuA compare
IAI47_17970 +0.6 2.1 hypothetical protein compare
IAI47_12685 +0.6 4.2 ABC transporter ATP-binding protein compare
IAI47_06630 +0.6 4.0 phosphatase PAP2 family protein compare
IAI47_12935 +0.6 2.8 leucyl/phenylalanyl-tRNA--protein transferase compare
IAI47_00935 +0.6 2.2 Si-specific NAD(P)(+) transhydrogenase compare
IAI47_07885 +0.6 1.1 tRNA-Asn compare
IAI47_07880 +0.6 2.4 hypothetical protein compare
IAI47_02345 +0.6 1.2 5S ribosomal RNA compare
IAI47_11515 +0.6 1.2 hypothetical protein compare
IAI47_11540 +0.6 1.9 type VI secretion system tip protein VgrG compare
IAI47_06965 +0.6 0.6 glycosyltransferase family 2 protein compare
IAI47_09120 +0.6 2.2 hypothetical protein compare
IAI47_08810 +0.6 2.1 hypothetical protein compare
IAI47_16425 +0.5 4.0 MHS family MFS transporter compare
IAI47_17205 +0.5 1.0 PTS phosphocarrier protein NPr compare
IAI47_04855 +0.5 2.1 anti-sigma-E factor RseA compare
IAI47_17980 +0.5 2.9 capsule biosynthesis GfcC family protein compare
IAI47_12655 +0.5 3.9 Lon protease family protein compare
IAI47_12950 +0.5 4.0 ATP-dependent Clp protease adapter ClpS compare
IAI47_14750 +0.5 3.2 phosphatidylglycerophosphatase A compare
IAI47_11425 +0.5 1.4 hypothetical protein compare
IAI47_16670 +0.5 1.8 stress protein compare
IAI47_12945 +0.5 3.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
IAI47_06170 +0.5 1.6 YfcL family protein compare
IAI47_21780 +0.5 1.8 hypothetical protein compare
IAI47_05665 +0.5 1.8 hypothetical protein compare
IAI47_21880 +0.5 0.5 ParA family protein compare
IAI47_15005 +0.5 0.8 hypothetical protein compare
IAI47_11850 +0.5 1.7 hypothetical protein compare
IAI47_18475 +0.5 3.3 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
IAI47_19945 +0.5 0.7 hypothetical protein compare
IAI47_05835 +0.5 2.2 hypothetical protein compare
IAI47_08430 +0.5 1.4 dihydroneopterin triphosphate diphosphatase compare
IAI47_07920 +0.4 2.1 hypothetical protein compare
IAI47_02385 +0.4 3.3 tRNA dihydrouridine synthase DusB compare
IAI47_07435 +0.4 2.6 hypothetical protein compare
IAI47_04740 +0.4 2.1 hypothetical protein compare
IAI47_15185 +0.4 2.4 class II glutamine amidotransferase compare
IAI47_17785 +0.4 3.8 oligosaccharide flippase family protein compare
IAI47_01735 +0.4 2.0 malonate decarboxylase acyl carrier protein compare
IAI47_03480 +0.4 1.5 DUF2474 domain-containing protein compare
IAI47_17080 +0.4 2.5 transcription elongation factor GreA compare
IAI47_06940 +0.4 0.3 tyrosine-protein kinase Wzc compare
IAI47_05810 +0.4 0.9 hypothetical protein compare
IAI47_02830 +0.4 2.1 divisome-associated lipoprotein YraP compare
IAI47_01120 +0.4 3.0 manganese efflux pump MntP compare
IAI47_10675 +0.4 1.9 hypothetical protein compare
IAI47_18415 +0.4 1.1 lipoprotein compare
IAI47_14660 +0.4 2.9 trigger factor compare
IAI47_06550 +0.4 1.4 hypothetical protein compare
IAI47_20000 +0.4 1.9 PTS sugar transporter subunit IIB compare
IAI47_04055 +0.4 2.0 SecY-interacting protein compare
IAI47_18510 +0.4 3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
IAI47_19585 +0.4 3.5 EAL domain-containing protein compare
IAI47_21385 +0.4 1.7 DNA polymerase V subunit compare
IAI47_13865 +0.4 2.5 hypothetical protein compare
IAI47_13030 +0.4 2.3 putrescine ABC transporter permease PotI compare
IAI47_08850 +0.4 1.9 septum site-determining protein MinD compare
IAI47_04235 +0.4 3.5 RNA polymerase sigma factor RpoS compare
IAI47_05250 +0.4 3.2 GGDEF domain-containing protein compare
IAI47_20125 +0.4 2.2 hypothetical protein compare
IAI47_19740 +0.4 2.3 anti-sigma factor compare
IAI47_05090 +0.4 1.1 hypothetical protein compare
IAI47_20640 +0.4 1.3 hypothetical protein compare
IAI47_05805 +0.4 2.2 DNA replication protein compare
IAI47_14515 +0.4 3.6 multidrug efflux RND transporter permease subunit compare
IAI47_08730 +0.4 1.4 YebO family protein compare
IAI47_19350 +0.4 1.9 DUF305 domain-containing protein compare
IAI47_18465 +0.4 3.1 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
IAI47_15070 +0.4 2.2 hypothetical protein compare
IAI47_09135 +0.4 2.2 acyl-CoA thioester hydrolase YciA compare
IAI47_08470 +0.4 3.3 murein DD-endopeptidase MepM compare
IAI47_10720 +0.4 2.2 transcriptional regulator SlyA compare
IAI47_19780 +0.4 2.0 TetR/AcrR family transcriptional regulator compare
IAI47_02775 +0.4 1.5 glycine dehydrogenase compare
IAI47_20385 +0.4 1.8 aspartate aminotransferase family protein compare
IAI47_03705 +0.4 2.1 arginine exporter ArgO compare
IAI47_12485 +0.4 3.0 transcriptional regulator SdiA compare
IAI47_17985 +0.4 3.4 YjbH domain-containing protein compare
IAI47_00860 +0.4 3.0 DNA-binding transcriptional regulator CytR compare
IAI47_09770 +0.4 1.9 osmoprotectant ABC transporter permease OsmW compare
IAI47_09320 +0.4 2.7 exoribonuclease II compare
IAI47_19890 +0.4 1.0 hypothetical protein compare
IAI47_17780 +0.4 3.3 hypothetical protein compare
IAI47_19445 +0.4 2.4 LysR family transcriptional regulator compare
IAI47_21360 +0.4 1.7 transcriptional regulator compare
IAI47_08460 +0.4 2.5 zinc ABC transporter ATP-binding protein ZnuC compare
IAI47_10300 +0.4 2.0 helix-turn-helix domain-containing protein compare
IAI47_17385 +0.4 1.1 CDP-alcohol phosphatidyltransferase family protein compare
IAI47_06675 +0.4 1.2 DUF1232 domain-containing protein compare
IAI47_20770 +0.3 1.8 RraA family protein compare
IAI47_00370 +0.3 3.0 ribokinase compare
IAI47_10155 +0.3 1.8 thiol-disulfide oxidoreductase DCC family protein compare
IAI47_09145 +0.3 1.7 UPF0259 family protein compare
IAI47_01685 +0.3 3.0 glycogen debranching protein GlgX compare
IAI47_00515 +0.3 0.8 DNA-directed RNA polymerase subunit omega compare
IAI47_20380 +0.3 2.6 diaminobutyrate--2-oxoglutarate transaminase compare
IAI47_21710 +0.3 1.7 response regulator transcription factor compare
IAI47_04735 +0.3 1.9 DUF5375 family protein compare
IAI47_21640 +0.3 1.6 sigma-70 family RNA polymerase sigma factor compare
IAI47_19325 +0.3 1.0 transposase compare
IAI47_20320 +0.3 2.1 alpha/beta hydrolase compare
IAI47_16600 +0.3 0.5 tRNA-OTHER compare
IAI47_12985 +0.3 1.4 heavy metal-binding domain-containing protein compare
IAI47_01550 +0.3 2.1 cell division protein FtsX compare
IAI47_04570 +0.3 1.8 hypothetical protein compare
IAI47_11975 +0.3 2.9 transcription-repair coupling factor compare
IAI47_06065 +0.3 1.6 cytochrome c biogenesis heme-transporting ATPase CcmA compare
IAI47_01680 +0.3 3.1 1,4-alpha-glucan branching enzyme compare
IAI47_07905 +0.3 0.4 Arc family DNA-binding protein compare
IAI47_15090 +0.3 1.4 hypothetical protein compare
IAI47_01875 +0.3 0.9 hypothetical protein compare
IAI47_16490 +0.3 1.2 PTS sugar transporter subunit IIA compare
IAI47_06595 +0.3 1.0 hypothetical protein compare
IAI47_05475 +0.3 1.7 FlxA-like family protein compare
IAI47_13040 +0.3 2.4 putrescine ABC transporter ATP-binding subunit PotG compare
IAI47_05185 +0.3 1.6 uracil phosphoribosyltransferase compare
IAI47_05325 +0.3 0.8 DUF1471 domain-containing protein compare
IAI47_13485 +0.3 1.7 cyclic pyranopterin monophosphate synthase MoaC compare
IAI47_08805 +0.3 1.8 RidA family protein compare
IAI47_21645 +0.3 1.8 tetratricopeptide repeat protein compare
IAI47_17685 +0.3 2.0 AraC family transcriptional regulator compare
IAI47_18250 +0.3 1.8 transcription/translation regulatory transformer protein RfaH compare
IAI47_20300 +0.3 1.7 hydrolase compare
IAI47_14510 +0.3 2.6 efflux RND transporter periplasmic adaptor subunit compare
IAI47_19400 +0.3 1.9 nucleotidyltransferase family protein compare
IAI47_04560 +0.3 2.4 S-methylmethionine permease compare
IAI47_10370 +0.3 2.0 oxidoreductase compare
IAI47_17860 +0.3 1.7 envelope stress response protein PspG compare
IAI47_03630 +0.3 1.3 SprT family zinc-dependent metalloprotease compare
IAI47_09615 +0.3 1.8 LysR family transcriptional regulator compare
IAI47_10800 +0.3 1.8 LysR family transcriptional regulator compare
IAI47_14450 +0.3 2.4 hypothetical protein compare
IAI47_04730 +0.3 2.4 toprim domain-containing protein compare
IAI47_04965 +0.3 1.9 3-phenylpropionate MFS transporter compare
IAI47_14545 +0.3 1.1 hypothetical protein compare
IAI47_20330 +0.3 1.6 LacI family DNA-binding transcriptional regulator compare
IAI47_20450 +0.3 1.7 LysR family transcriptional regulator compare
IAI47_20830 +0.3 1.7 DUF2000 domain-containing protein compare
IAI47_08635 +0.3 1.3 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI47_06995 +0.3 2.1 UTP--glucose-1-phosphate uridylyltransferase GalF compare
IAI47_15305 +0.3 0.9 allantoin racemase compare
IAI47_04775 +0.3 0.7 SIR2 family protein compare
IAI47_18505 +0.3 1.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
IAI47_04280 +0.3 1.3 alkylphosphonate utilization protein compare
IAI47_10340 +0.3 1.8 mannose-6-phosphate isomerase compare
IAI47_21715 +0.3 1.5 HAMP domain-containing protein compare
IAI47_20525 +0.3 1.9 maltose/maltodextrin ABC transporter substrate-binding protein MalE compare
IAI47_10225 +0.3 1.2 pyrroloquinoline quinone precursor peptide PqqA compare
IAI47_20210 +0.3 1.9 ABC transporter substrate-binding protein compare
IAI47_08965 +0.3 2.1 asparaginase compare
IAI47_15415 +0.3 1.3 aminoacyl-tRNA hydrolase compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Aluminum potassium sulfate dodecahydrate across organisms