Experiment set2IT074 for Pseudomonas fluorescens FW300-N2C3

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
AO356_21405 -6.3 -4.3 3-isopropylmalate dehydratase compare
AO356_14440 -6.1 -4.2 indole-3-glycerol-phosphate synthase compare
AO356_21440 -6.0 -5.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_08635 -5.7 -6.8 ATP phosphoribosyltransferase regulatory subunit compare
AO356_09815 -5.6 -3.9 imidazoleglycerol-phosphate dehydratase compare
AO356_13410 -5.5 -8.5 homoserine O-acetyltransferase compare
AO356_12525 -5.5 -7.5 acetylglutamate kinase compare
AO356_13405 -5.4 -9.0 methionine biosynthesis protein MetW compare
AO356_18275 -5.3 -10.2 ornithine carbamoyltransferase compare
AO356_18325 -5.2 -10.5 argininosuccinate synthase compare
AO356_14435 -5.2 -6.2 anthranilate phosphoribosyltransferase compare
AO356_10300 -5.1 -8.4 3-phosphoglycerate dehydrogenase compare
AO356_14420 -5.1 -13.5 anthranilate synthase compare
AO356_06970 -5.0 -8.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_09810 -5.0 -3.4 imidazole glycerol phosphate synthase subunit HisH compare
AO356_22200 -4.9 -7.5 sirohydrochlorin ferrochelatase compare
AO356_09520 -4.9 -4.7 phosphoribosyl-AMP cyclohydrolase compare
AO356_21465 -4.9 -3.4 amidophosphoribosyltransferase compare
AO356_09425 -4.9 -4.7 malate dehydrogenase compare
AO356_00555 -4.8 -11.5 sulfite reductase compare
AO356_02265 -4.7 -3.3 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_21400 -4.7 -7.3 isopropylmalate isomerase compare
AO356_10910 -4.7 -9.1 tryptophan synthase subunit alpha compare
AO356_21415 -4.7 -11.3 3-isopropylmalate dehydrogenase compare
AO356_16175 -4.7 -6.4 acetolactate synthase 3 regulatory subunit compare
AO356_20830 -4.7 -4.5 phosphoadenosine phosphosulfate reductase compare
AO356_09525 -4.5 -6.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_16170 -4.5 -8.1 acetolactate synthase 3 catalytic subunit compare
AO356_06965 -4.5 -9.1 histidinol dehydrogenase compare
AO356_10340 -4.5 -13.5 phosphoserine phosphatase compare
AO356_16180 -4.5 -14.2 ketol-acid reductoisomerase compare
AO356_13605 -4.4 -5.3 5,10-methylenetetrahydrofolate reductase compare
AO356_13085 -4.4 -10.6 N-acetylglutamate synthase compare
AO356_10915 -4.4 -9.5 tryptophan synthase subunit beta compare
AO356_21470 -4.4 -7.2 O-succinylhomoserine sulfhydrylase compare
AO356_08735 -4.4 -13.7 phosphoserine phosphatase compare
AO356_12520 -4.3 -3.0 orotate phosphoribosyltransferase compare
AO356_09800 -4.2 -5.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_14295 -4.2 -2.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO356_09540 -4.2 -2.9 twin-arginine protein translocation system subunit TatC compare
AO356_13250 -4.1 -10.7 dihydroxy-acid dehydratase compare
AO356_00560 -4.1 -2.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_19795 -3.8 -2.6 glycerol-3-phosphate dehydrogenase compare
AO356_14430 -3.8 -6.7 anthranilate synthase compare
AO356_19090 -3.7 -4.4 phosphoribosylaminoimidazole synthetase compare
AO356_19085 -3.7 -8.8 phosphoribosylglycinamide formyltransferase compare
AO356_06550 -3.6 -8.1 2-isopropylmalate synthase compare
AO356_12780 -3.5 -8.5 argininosuccinate lyase compare
AO356_06960 -3.4 -8.0 histidinol-phosphate aminotransferase compare
AO356_09795 -3.3 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
AO356_13685 -3.3 -4.3 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_16600 -3.3 -3.1 malate:quinone oxidoreductase compare
AO356_17520 -3.2 -2.2 phosphoribosylformylglycinamidine synthase compare
AO356_03800 -3.2 -2.9 histidine kinase compare
AO356_03180 -3.1 -5.9 CysB family transcriptional regulator compare
AO356_01750 -2.9 -4.8 ATP-dependent Clp protease proteolytic subunit compare
AO356_16665 -2.9 -11.7 sulfate adenylyltransferase compare
AO356_11315 -2.8 -1.9 shikimate dehydrogenase compare
AO356_06385 -2.8 -5.0 recombinase XerD compare
AO356_21330 -2.6 -10.5 aromatic amino acid aminotransferase compare
AO356_16670 -2.5 -11.5 adenylylsulfate kinase compare
AO356_01745 -2.5 -5.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_19050 -2.5 -3.4 cysteine synthase compare
AO356_08235 -2.4 -9.1 histidine kinase compare
AO356_27180 -2.4 -4.9 hypothetical protein compare
AO356_19420 -2.4 -2.8 septum formation inhibitor compare
AO356_16075 -2.4 -5.1 Fis family transcriptional regulator compare
AO356_11450 -2.3 -2.7 cytochrome C compare
AO356_17065 -2.3 -2.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
AO356_17075 -2.3 -3.0 cytochrome C compare
AO356_27215 -2.2 -2.7 hypothetical protein compare
AO356_18020 -2.2 -4.1 ATP-dependent DNA helicase RuvA compare
AO356_17070 -2.2 -2.9 cytochrome B compare
AO356_08875 -2.1 -3.4 toluene tolerance protein compare
AO356_14135 -2.1 -12.0 biotin synthase compare
AO356_10140 -2.0 -7.5 phosphoenolpyruvate carboxykinase [ATP] compare
AO356_06575 -2.0 -3.7 outer membrane protein assembly factor BamB compare
AO356_12380 -2.0 -7.4 ATP-dependent DNA helicase RecG compare
AO356_02290 -2.0 -4.1 TetR family transcriptional regulator compare
AO356_21410 -2.0 -3.1 SAM-dependent methyltransferase compare
AO356_20175 -1.9 -2.6 3-oxoacyl-ACP synthase compare
AO356_07480 -1.9 -3.3 carbamoyl phosphate synthase large subunit compare
AO356_02465 -1.8 -2.7 carbonate dehydratase compare
AO356_10330 -1.8 -11.0 threonine dehydratase compare
AO356_27210 -1.7 -7.0 hypothetical protein compare
AO356_20155 -1.7 -6.4 phosphate acyltransferase compare
AO356_02460 -1.7 -2.3 hypothetical protein compare
AO356_07370 -1.6 -4.6 nicotinate-nucleotide pyrophosphorylase compare
AO356_12375 -1.5 -8.6 histidine kinase compare
AO356_06615 -1.5 -1.7 FeS assembly protein IscX compare
AO356_19180 -1.5 -3.9 cobalamin synthase compare
AO356_03070 -1.5 -8.7 histidine kinase compare
AO356_04550 -1.5 -3.3 response regulator SirA compare
AO356_02825 -1.5 -9.4 phosphoenolpyruvate synthase compare
AO356_17890 -1.5 -2.4 H-NS histone compare
AO356_07915 -1.5 -3.0 exodeoxyribonuclease V subunit beta compare
AO356_12735 -1.5 -2.2 diaminopimelate epimerase compare
AO356_13455 -1.4 -4.2 uracil phosphoribosyltransferase compare
AO356_04560 -1.4 -2.5 serine peptidase compare
AO356_08640 -1.4 -4.1 membrane protease HflC compare
AO356_05670 -1.4 -2.7 recombinase RecA compare
AO356_08280 -1.4 -3.2 oxidoreductase compare
AO356_03405 -1.4 -3.3 serine acetyltransferase compare
AO356_00530 -1.4 -3.8 precorrin-4 C11-methyltransferase compare
AO356_02485 -1.3 -2.9 transcriptional regulator compare
AO356_03500 -1.3 -3.0 3-oxoacyl-ACP reductase compare
AO356_10145 -1.3 -2.2 molecular chaperone Hsp33 compare
AO356_11085 -1.3 -5.3 LysR family transcriptional regulator compare
AO356_08275 -1.3 -3.4 precorrin isomerase compare
AO356_01275 -1.3 -4.6 GntR family transcriptional regulator compare
AO356_21125 -1.2 -3.9 cyclic peptide transporter compare
AO356_26040 -1.2 -1.7 hypothetical protein compare
AO356_19170 -1.1 -3.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO356_02420 -1.1 -3.9 cytochrome C oxidase Cbb3 compare
AO356_03095 -1.1 -4.6 protease HtpX compare
AO356_29515 -1.1 -1.4 energy transducer TonB compare
AO356_17485 -1.1 -3.4 elongation factor 4 compare
AO356_12450 -1.1 -5.3 hypothetical protein compare
AO356_01270 -1.1 -4.9 (Fe-S)-binding protein compare
AO356_16050 -1.1 -2.6 glucose-6-phosphate isomerase compare
AO356_08290 -1.1 -2.3 precorrin-6Y C5,15-methyltransferase compare
AO356_01740 -1.0 -2.6 DNA-binding protein compare
AO356_05630 -1.0 -2.6 LysR family transcriptional regulator compare
AO356_00355 -1.0 -5.7 chemotaxis protein CheY compare
AO356_17950 -1.0 -5.6 histidine kinase compare
AO356_20880 -1.0 -1.9 3-methylitaconate isomerase compare
AO356_15165 -1.0 -1.9 protein cII compare
AO356_02205 -1.0 -2.4 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
AO356_12515 -1.0 -2.6 exodeoxyribonuclease III compare
AO356_08470 -1.0 -7.5 N-acylglucosamine 2-epimerase compare
AO356_08265 -1.0 -3.6 precorrin-3B C17-methyltransferase compare
AO356_25535 -1.0 -2.0 hypothetical protein compare
AO356_03620 -1.0 -2.8 cytochrome C compare
AO356_19045 -1.0 -6.5 chemotaxis protein CheY compare
AO356_17735 -1.0 -4.7 XRE family transcriptional regulator compare
AO356_12725 -1.0 -3.0 recombinase XerC compare
AO356_08585 -0.9 -2.4 50S ribosomal protein L9 compare
AO356_15750 -0.9 -2.0 hypothetical protein compare
AO356_16060 -0.9 -3.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
AO356_18730 -0.9 -4.8 arginine N-succinyltransferase compare
AO356_17985 -0.9 -3.3 cold-shock protein compare
AO356_12900 -0.9 -2.6 exopolyphosphatase compare
AO356_07920 -0.9 -3.3 exodeoxyribonuclease V subunit gamma compare
AO356_02025 -0.9 -2.3 hypothetical protein compare
AO356_03010 -0.9 -2.0 glutaredoxin compare
AO356_16070 -0.9 -3.3 poly(A) polymerase compare
AO356_24550 -0.9 -1.6 hypothetical protein compare
AO356_11025 -0.9 -3.3 transcriptional regulator PhoU compare
AO356_17035 -0.9 -3.4 ATPase compare
AO356_01840 -0.9 -1.7 uracil permease compare
AO356_27230 -0.9 -2.9 hypothetical protein compare
AO356_19140 -0.9 -5.6 cobyrinic acid a,c-diamide synthase compare
AO356_05565 -0.9 -2.9 hypothetical protein compare
AO356_25830 -0.9 -1.8 DNA repair protein compare
AO356_19135 -0.9 -2.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO356_22675 -0.9 -1.5 sulfate transporter compare
AO356_26245 -0.8 -2.1 energy transducer TonB compare
AO356_21560 -0.8 -2.2 hypothetical protein compare
AO356_25150 -0.8 -2.2 molybdenum cofactor biosynthesis protein B compare
AO356_18025 -0.8 -1.9 ATP-dependent DNA helicase RuvB compare
AO356_19730 -0.8 -1.4 hypothetical protein compare
AO356_02405 -0.8 -5.6 cytochrome C oxidase Cbb3 compare
AO356_19175 -0.8 -2.8 alpha-ribazole phosphatase compare
AO356_04405 -0.8 -1.8 NADH dehydrogenase compare
AO356_28970 -0.8 -1.8 Fis family transcriptional regulator compare
AO356_15815 -0.8 -1.2 gamma-glutamyl kinase compare
AO356_27250 -0.8 -2.9 hypothetical protein compare
AO356_12945 -0.8 -3.0 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
AO356_06415 -0.8 -2.8 cytochrome C assembly protein compare
AO356_28255 -0.8 -2.0 class III aminotransferase compare
AO356_02070 -0.8 -2.3 phage tail protein compare
AO356_17505 -0.8 -2.8 DNA repair protein RecO compare
AO356_10880 -0.8 -1.1 hypothetical protein compare
AO356_07090 -0.8 -2.0 hypothetical protein compare
AO356_15460 -0.8 -1.5 hypothetical protein compare
AO356_19565 -0.8 -1.6 hypothetical protein compare
AO356_25145 -0.8 -1.9 pyridoxine 5'-phosphate oxidase compare
AO356_10345 -0.8 -2.8 RNA pyrophosphohydrolase compare
AO356_28460 -0.8 -1.6 short-chain dehydrogenase compare
AO356_08645 -0.8 -2.8 hypothetical protein compare
AO356_19255 -0.8 -1.8 molecular chaperone compare
AO356_16875 -0.8 -5.5 GntR family transcriptional regulator compare
AO356_11095 -0.7 -6.3 sodium:alanine symporter compare
AO356_06980 -0.7 -2.4 BolA family transcriptional regulator compare
AO356_23500 -0.7 -4.1 TetR family transcriptional regulator compare
AO356_18330 -0.7 -3.8 hypothetical protein compare
AO356_08930 -0.7 -1.7 heptose kinase compare
AO356_15295 -0.7 -2.5 nicotinate-nucleotide adenylyltransferase compare
AO356_14155 -0.7 -4.0 dethiobiotin synthetase compare
AO356_02175 -0.7 -4.1 transaldolase compare
AO356_19405 -0.7 -2.4 pseudouridine synthase compare
AO356_26455 -0.7 -1.1 hypothetical protein compare
AO356_12475 -0.7 -4.4 reactive intermediate/imine deaminase compare
AO356_00545 -0.7 -4.5 methionine synthase compare
AO356_00500 -0.7 -1.9 magnesium chelatase compare
AO356_29730 -0.7 -1.5 MarR family transcriptional regulator compare
AO356_01940 -0.7 -1.0 hypothetical protein compare
AO356_01605 -0.7 -2.2 hypothetical protein compare
AO356_06990 -0.7 -2.5 toluene tolerance protein compare
AO356_09780 -0.7 -2.3 peptidase S41 compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas fluorescens FW300-N2C3

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms