Experiment set2IT074 for Pseudomonas fluorescens FW300-N2C3

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
AO356_19240 +1.2 2.2 cupin compare
AO356_27630 +1.1 2.9 chemotaxis protein CheY compare
AO356_26485 +1.0 1.8 hypothetical protein compare
AO356_08315 +1.0 2.8 hypothetical protein compare
AO356_06735 +0.9 3.6 hypothetical protein compare
AO356_00575 +0.9 2.0 SCP-2 family sterol carrier protein compare
AO356_05735 +0.8 1.6 hypothetical protein compare
AO356_00130 +0.8 3.5 XRE family transcriptional regulator compare
AO356_27280 +0.7 1.4 XRE family transcriptional regulator compare
AO356_20090 +0.7 1.7 protein tyrosine phosphatase compare
AO356_19780 +0.7 5.0 histidine kinase compare
AO356_02360 +0.7 2.5 multifunctional fatty acid oxidation complex subunit alpha compare
AO356_26895 +0.7 2.0 2Fe-2S ferredoxin compare
AO356_25865 +0.7 1.6 peroxidase compare
AO356_22405 +0.6 1.7 hypothetical protein compare
AO356_25310 +0.6 1.2 hypothetical protein compare
AO356_00385 +0.6 1.3 peptidylprolyl isomerase compare
AO356_27150 +0.6 2.3 threonine synthase compare
AO356_20940 +0.6 1.6 hypothetical protein compare
AO356_26205 +0.6 2.2 nitrite reductase compare
AO356_08985 +0.6 0.9 hypothetical protein compare
AO356_14825 +0.6 1.3 AraC family transcriptional regulator compare
AO356_30425 +0.6 2.2 pyrroloquinoline quinone biosynthesis protein PqqE compare
AO356_03665 +0.6 2.0 flagellar hook-length control protein FliK compare
AO356_29795 +0.6 1.1 amino acid transporter compare
AO356_28995 +0.6 1.4 ABC transporter ATP-binding protein compare
AO356_01515 +0.6 3.1 N-formylglutamate amidohydrolase compare
AO356_01095 +0.6 2.0 glycolate oxidase compare
AO356_01545 +0.6 1.3 hypothetical protein compare
AO356_26330 +0.6 1.9 Lipid A biosynthesis, N-terminal compare
AO356_23945 +0.6 1.4 hypothetical protein compare
AO356_24190 +0.5 2.8 GntR family transcriptional regulator compare
AO356_04275 +0.5 1.1 3-oxoacyl-ACP synthase compare
AO356_21575 +0.5 2.1 GTP pyrophosphokinase compare
AO356_26255 +0.5 2.7 chemotaxis protein CheY compare
AO356_09765 +0.5 1.8 sulfurtransferase compare
AO356_04145 +0.5 2.4 hypothetical protein compare
AO356_19790 +0.5 4.9 TonB-dependent receptor compare
AO356_05345 +0.5 2.0 hypothetical protein compare
AO356_17255 +0.5 1.8 multidrug transporter compare
AO356_01825 +0.5 2.8 hypothetical protein compare
AO356_29125 +0.5 1.1 vanillate monooxygenase compare
AO356_07385 +0.5 0.9 tRNA-Thr compare
AO356_21215 +0.5 2.2 RNA polymerase subunit sigma-24 compare
AO356_02905 +0.5 3.6 amino acid ABC transporter substrate-binding protein compare
AO356_03810 +0.5 1.5 anti-anti-sigma factor compare
AO356_27310 +0.5 2.0 LysR family transcriptional regulator compare
AO356_26545 +0.5 2.1 hypothetical protein compare
AO356_15140 +0.5 1.1 homoserine dehydrogenase compare
AO356_09305 +0.5 2.1 type II secretory protein pull compare
AO356_03855 +0.5 3.7 AAA family ATPase compare
AO356_03830 +0.5 2.7 flagellar motor switch protein FliG compare
AO356_22565 +0.5 1.5 hypothetical protein compare
AO356_07075 +0.5 1.3 aspartate ammonia-lyase compare
AO356_21795 +0.5 1.1 PBS lyase compare
AO356_13710 +0.5 1.6 fructose-bisphosphate aldolase compare
AO356_28910 +0.5 0.9 LysR family transcriptional regulator compare
AO356_15440 +0.5 4.2 histidine kinase compare
AO356_23755 +0.5 1.6 AraC family transcriptional regulator compare
AO356_28985 +0.5 1.2 hypothetical protein compare
AO356_29540 +0.5 1.1 transcriptional regulator compare
AO356_12715 +0.5 1.9 hypothetical protein compare
AO356_27870 +0.5 1.8 ATPase compare
AO356_28820 +0.4 1.9 RNA polymerase subunit sigma compare
AO356_28260 +0.4 1.5 transcription factor compare
AO356_27945 +0.4 2.3 glycosyl hydrolase compare
AO356_23400 +0.4 1.3 phosphonate ABC transporter compare
AO356_18155 +0.4 1.0 cold-shock protein compare
AO356_29545 +0.4 2.6 nitrate ABC transporter substrate-binding protein compare
AO356_26905 +0.4 2.1 AraC family transcriptional regulator compare
AO356_28955 +0.4 1.4 hypothetical protein compare
AO356_24610 +0.4 2.4 3-carboxymuconate cyclase compare
AO356_01045 +0.4 1.7 hypothetical protein compare
AO356_05805 +0.4 1.8 phage tail protein compare
AO356_10505 +0.4 1.9 RND transporter compare
AO356_10890 +0.4 1.1 holliday junction resolvasome, helicase subunit compare
AO356_01915 +0.4 1.0 hypothetical protein compare
AO356_02305 +0.4 0.8 hypothetical protein compare
AO356_21655 +0.4 1.8 LysR family transcriptional regulator compare
AO356_24000 +0.4 2.4 hydroxyacid dehydrogenase compare
AO356_27995 +0.4 0.8 thioredoxin reductase compare
AO356_17105 +0.4 2.3 hypothetical protein compare
AO356_23760 +0.4 2.0 hypothetical protein compare
AO356_05800 +0.4 1.7 hypothetical protein compare
AO356_07660 +0.4 1.4 hypothetical protein compare
AO356_04445 +0.4 1.0 5-carboxymethyl-2-hydroxymuconate isomerase compare
AO356_04935 +0.4 0.8 3-oxoadipate--succinyl-CoA transferase compare
AO356_06105 +0.4 0.8 cold-shock protein compare
AO356_06360 +0.4 0.7 hypothetical protein compare
AO356_09185 +0.4 0.8 hypothetical protein compare
AO356_17545 +0.4 1.6 iron dicitrate transport regulator FecR compare
AO356_23180 +0.4 1.2 xylose isomerase compare
AO356_05340 +0.4 2.4 ABC transporter ATP-binding protein compare
AO356_22265 +0.4 2.0 hypothetical protein compare
AO356_26175 +0.4 1.9 methyltransferase compare
AO356_25995 +0.4 1.3 acetylglucosaminylphosphatidylinositol deacetylase compare
AO356_19515 +0.4 0.5 hypothetical protein compare
AO356_22430 +0.4 1.6 hypothetical protein compare
AO356_01690 +0.4 2.0 cytochrome B compare
AO356_27400 +0.4 1.0 1,2-oxophytodienoate reductase compare
AO356_03910 +0.4 2.8 flagellar biosynthesis protein FlgJ compare
AO356_21080 +0.4 1.5 sugar dehydrogenase compare
AO356_24615 +0.4 1.1 hypothetical protein compare
AO356_18085 +0.4 2.5 thermostable hemolysin compare
AO356_03685 +0.4 2.5 chemotaxis protein CheW compare
AO356_28120 +0.4 1.4 NosL protein compare
AO356_15705 +0.4 1.6 GntR family transcriptional regulator compare
AO356_17575 +0.4 1.2 hypothetical protein compare
AO356_24565 +0.4 1.6 hypothetical protein compare
AO356_08135 +0.4 1.4 MFS transporter compare
AO356_10245 +0.4 1.7 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA compare
AO356_20575 +0.4 2.2 baseplate assembly protein compare
AO356_12435 +0.4 1.5 hypothetical protein compare
AO356_08380 +0.4 1.2 acetyltransferase compare
AO356_17560 +0.4 2.1 hypothetical protein compare
AO356_29835 +0.4 0.6 LuxR family transcriptional regulator compare
AO356_14895 +0.4 1.9 methionine ABC transporter ATP-binding protein compare
AO356_20785 +0.4 0.8 hypothetical protein compare
AO356_13880 +0.4 1.4 DNA-binding protein compare
AO356_16395 +0.4 1.2 chemotaxis protein compare
AO356_01950 +0.4 1.8 hypothetical protein compare
AO356_29710 +0.4 0.9 xylose isomerase compare
AO356_25330 +0.4 1.8 short-chain dehydrogenase compare
AO356_07080 +0.4 1.5 FagA protein compare
AO356_16890 +0.4 1.4 hypothetical protein compare
AO356_09555 +0.4 1.5 hypothetical protein compare
AO356_22815 +0.4 0.8 lactoylglutathione lyase compare
AO356_04965 +0.4 0.7 ATP-dependent helicase compare
AO356_12755 +0.4 1.7 nucleoside diphosphate kinase regulator compare
AO356_08020 +0.4 1.8 2OG-Fe(II) oxygenase compare
AO356_09560 +0.4 3.0 glucosyltransferase MdoH compare
AO356_02135 +0.4 1.3 hypothetical protein compare
AO356_05795 +0.4 0.8 phage tail protein compare
AO356_19100 +0.4 1.9 hypothetical protein compare
AO356_21805 +0.4 1.4 LexA family transcriptional regulator compare
AO356_25340 +0.3 1.3 NADH:flavin oxidoreductase compare
AO356_24940 +0.3 1.6 AraC family transcriptional regulator compare
AO356_02030 +0.3 1.5 baseplate assembly protein compare
AO356_24335 +0.3 0.6 type VI secretion protein compare
AO356_29695 +0.3 1.1 polysaccharide deacetylase compare
AO356_15245 +0.3 1.5 hypothetical protein compare
AO356_05000 +0.3 1.4 lysine transporter LysE compare
AO356_28245 +0.3 1.5 alpha/beta hydrolase compare
AO356_04500 +0.3 2.3 addiction module antitoxin compare
AO356_29855 +0.3 0.6 hypothetical protein compare
AO356_29755 +0.3 1.0 hypothetical protein compare
AO356_14905 +0.3 1.5 hypothetical protein compare
AO356_03835 +0.3 2.5 flagellar M-ring protein FliF compare
AO356_00810 +0.3 0.9 hypothetical protein compare
AO356_29300 +0.3 2.0 ABC transporter substrate-binding protein compare
AO356_16520 +0.3 0.9 Fe-S-oxidoreductase compare
AO356_18900 +0.3 2.1 flagellar biosynthesis protein FlgA compare
AO356_20260 +0.3 0.9 termination factor Rho compare
AO356_26400 +0.3 1.6 LysR family transcriptional regulator compare
AO356_14105 +0.3 0.6 glycine cleavage system protein R compare
AO356_23005 +0.3 1.8 hypothetical protein compare
AO356_28810 +0.3 1.6 aminotransferase class V compare
AO356_24825 +0.3 1.6 hypothetical protein compare
AO356_12440 +0.3 2.4 epimerase compare
AO356_28595 +0.3 1.0 transcriptional regulator compare
AO356_24055 +0.3 1.9 LysR family transcriptional regulator compare
AO356_05325 +0.3 2.4 branched-chain amino acid transporter permease subunit LivH compare
AO356_28065 +0.3 1.7 LuxR family transcriptional regulator compare
AO356_23600 +0.3 1.4 hypothetical protein compare
AO356_01600 +0.3 1.6 Cro/Cl family transcriptional regulator compare
AO356_25580 +0.3 1.0 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
AO356_20930 +0.3 1.2 MerR family transcriptional regulator compare
AO356_15500 +0.3 2.2 hypothetical protein compare
AO356_00875 +0.3 1.4 MerR family transcriptional regulator compare
AO356_21085 +0.3 1.1 cupin compare
AO356_17345 +0.3 0.9 molybdenum cofactor biosynthesis protein MoaE compare
AO356_26690 +0.3 1.7 phosphate ABC transporter permease compare
AO356_21040 +0.3 1.7 dimethylglycine dehydrogenase compare
AO356_15770 +0.3 1.3 hypothetical protein compare
AO356_17915 +0.3 1.7 ATP-binding protein compare
AO356_27360 +0.3 0.9 nitrile hydratase subunit alpha compare
AO356_05080 +0.3 0.7 peptide deformylase compare
AO356_12905 +0.3 0.7 amino acid ABC transporter ATP-binding protein compare
AO356_16835 +0.3 1.4 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) compare
AO356_03100 +0.3 1.8 thiopurine S-methyltransferase compare
AO356_03930 +0.3 1.4 flagellar biosynthesis protein FlgF compare
AO356_22650 +0.3 0.4 chemotaxis protein CheD compare
AO356_02210 +0.3 0.6 copper-binding protein compare
AO356_14890 +0.3 2.4 peptide ABC transporter permease compare
AO356_07810 +0.3 1.7 NADPH quinone reductase MdaB compare
AO356_01115 +0.3 0.6 hypothetical protein compare
AO356_06870 +0.3 2.0 ABC transporter substrate-binding protein compare
AO356_29190 +0.3 1.1 3-demethylubiquinone-9 3-methyltransferase compare
AO356_14365 +0.3 1.3 molecular chaperone DnaJ compare
AO356_02700 +0.3 0.9 type III secretion system protein SpaQ compare
AO356_01985 +0.3 0.7 head completion/stabilization protein compare
AO356_29495 +0.3 1.7 NADPH:quinone oxidoreductase compare
AO356_02925 +0.3 2.1 acyl-CoA dehydrogenase compare
AO356_28575 +0.3 1.0 ABC transporter permease compare
AO356_28355 +0.3 1.6 hypothetical protein compare
AO356_28455 +0.3 1.0 transcriptional regulator compare
AO356_20570 +0.3 1.3 baseplate assembly protein compare
AO356_19060 +0.3 2.6 (p)ppGpp synthetase compare
AO356_10960 +0.3 1.5 hypothetical protein compare
AO356_25735 +0.3 1.0 3,4-dihydroxy-2-butanone 4-phosphate synthase compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas fluorescens FW300-N2C3

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms