Experiment set2IT074 for Pantoea sp. MT58

Compare to:

Manganese (II) chloride tetrahydrate 50 uM, aerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_06965 +2.1 5.2 glycosyltransferase family 2 protein compare
IAI47_03645 +1.5 14.0 O-antigen ligase family protein compare
IAI47_06450 +1.5 5.7 ribonucleotide-diphosphate reductase subunit beta compare
IAI47_00670 +1.5 13.5 sugar glycosyltransferase compare
IAI47_15485 +1.5 1.9 molecular chaperone Skp compare
IAI47_03640 +1.4 12.4 glycosyltransferase compare
IAI47_06940 +1.4 1.1 tyrosine-protein kinase Wzc compare
IAI47_10845 +1.4 3.9 major outer membrane lipoprotein compare
IAI47_05525 +1.2 1.7 tRNA-Ala compare
IAI47_18470 +1.2 10.5 ECA oligosaccharide polymerase compare
IAI47_01135 +1.2 1.4 hypothetical protein compare
IAI47_06455 +1.2 5.6 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_16420 +1.2 9.6 LacI family DNA-binding transcriptional regulator compare
IAI47_07000 +1.1 8.6 UDP-glucose 4-epimerase GalE compare
IAI47_17205 +1.1 2.4 PTS phosphocarrier protein NPr compare
IAI47_02895 +1.1 8.7 DedA family protein compare
IAI47_06565 +1.1 2.4 YejL family protein compare
IAI47_00770 +1.1 1.3 general stress protein compare
IAI47_17895 +1.1 7.1 diacylglycerol kinase compare
IAI47_06360 +1.1 2.2 NADH-quinone oxidoreductase subunit A compare
IAI47_18495 +1.1 6.0 glucose-1-phosphate thymidylyltransferase RfbA compare
IAI47_18465 +1.0 8.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
IAI47_18510 +1.0 7.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
IAI47_18505 +1.0 6.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
IAI47_18485 +0.9 6.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
IAI47_06395 +0.9 1.1 NADH-quinone oxidoreductase subunit NuoI compare
IAI47_06750 +0.9 6.8 outer membrane permeability protein SanA compare
IAI47_12685 +0.9 6.7 ABC transporter ATP-binding protein compare
IAI47_07630 +0.8 3.7 glyoxylate/hydroxypyruvate reductase A compare
IAI47_18475 +0.8 5.4 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
IAI47_11475 +0.8 1.2 hypothetical protein compare
IAI47_08010 +0.8 4.5 flagella biosynthesis chaperone FliJ compare
IAI47_21665 +0.8 1.4 DUF333 domain-containing protein compare
IAI47_18480 +0.8 5.4 lipid III flippase WzxE compare
IAI47_04855 +0.8 2.9 anti-sigma-E factor RseA compare
IAI47_14960 +0.8 2.7 anti-adapter protein IraP compare
IAI47_17970 +0.8 2.9 hypothetical protein compare
IAI47_16600 +0.8 1.5 tRNA-OTHER compare
IAI47_00675 +0.8 7.0 glycosyltransferase family 9 protein compare
IAI47_19785 +0.8 3.1 DUF1232 domain-containing protein compare
IAI47_18490 +0.8 2.8 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
IAI47_04110 +0.8 7.0 two-component sensor histidine kinase BarA compare
IAI47_07965 +0.8 3.7 transcriptional regulator RcsA compare
IAI47_02465 +0.8 6.2 metalloprotease TldD compare
IAI47_02765 +0.7 5.6 metalloprotease PmbA compare
IAI47_12470 +0.7 5.4 UvrY/SirA/GacA family response regulator transcription factor compare
IAI47_21335 +0.7 2.1 RepB family plasmid replication initiator protein compare
IAI47_10470 +0.7 1.6 electron transport complex subunit E compare
IAI47_08745 +0.7 1.6 transcription antiterminator/RNA stability regulator CspE compare
IAI47_00930 +0.7 4.1 DNA-binding transcriptional regulator OxyR compare
IAI47_06250 +0.6 4.6 DedA family protein compare
IAI47_08430 +0.6 2.3 dihydroneopterin triphosphate diphosphatase compare
IAI47_12670 +0.6 4.2 membrane integrity-associated transporter subunit PqiC compare
IAI47_15005 +0.6 1.5 hypothetical protein compare
IAI47_16955 +0.6 2.9 N-acetyltransferase compare
IAI47_16415 +0.6 4.7 nucleoside hydrolase compare
IAI47_20250 +0.6 1.7 DeoR family transcriptional regulator compare
IAI47_05765 +0.6 1.7 hypothetical protein compare
IAI47_13825 +0.6 2.7 YbfA family protein compare
IAI47_17080 +0.6 3.1 transcription elongation factor GreA compare
IAI47_20510 +0.6 2.5 maltose operon protein MalM compare
IAI47_06475 +0.6 2.6 transcriptional regulator RcsB compare
IAI47_11540 +0.6 1.9 type VI secretion system tip protein VgrG compare
IAI47_10675 +0.6 1.8 hypothetical protein compare
IAI47_21525 +0.6 3.3 WbuC family cupin fold metalloprotein compare
IAI47_12760 +0.6 4.4 porin OmpF compare
IAI47_10825 +0.6 0.9 tRNA-Val compare
IAI47_05830 +0.6 1.5 hypothetical protein compare
IAI47_11115 +0.6 2.6 hypothetical protein compare
IAI47_18250 +0.6 2.7 transcription/translation regulatory transformer protein RfaH compare
IAI47_12480 +0.6 4.1 autoinducer synthase compare
IAI47_05790 +0.6 1.8 hypothetical protein compare
IAI47_02400 +0.6 0.9 YhdT family protein compare
IAI47_01550 +0.6 3.4 cell division protein FtsX compare
IAI47_10575 +0.6 2.1 hypothetical protein compare
IAI47_00925 +0.6 1.4 hypothetical protein compare
IAI47_02350 +0.6 0.8 tRNA-Thr compare
IAI47_21490 +0.5 2.7 H-NS histone family protein compare
IAI47_14910 +0.5 2.7 recombination-associated protein RdgC compare
IAI47_08815 +0.5 1.3 hypothetical protein compare
IAI47_08165 +0.5 2.9 flagella biosynthesis regulatory protein FliZ compare
IAI47_11625 +0.5 1.2 DUF1311 domain-containing protein compare
IAI47_06710 +0.5 2.0 LysR family transcriptional regulator compare
IAI47_20705 +0.5 0.9 sulfur carrier protein ThiS compare
IAI47_06170 +0.5 1.2 YfcL family protein compare
IAI47_09400 +0.5 1.8 envelope stress response membrane protein PspB compare
IAI47_08610 +0.5 1.6 tail fiber assembly protein compare
IAI47_21780 +0.5 2.0 hypothetical protein compare
IAI47_02835 +0.5 3.3 DnaA initiator-associating protein DiaA compare
IAI47_12950 +0.5 4.0 ATP-dependent Clp protease adapter ClpS compare
IAI47_12675 +0.5 4.1 intermembrane transport protein PqiB compare
IAI47_10720 +0.5 2.4 transcriptional regulator SlyA compare
IAI47_08635 +0.5 1.7 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI47_12935 +0.5 2.2 leucyl/phenylalanyl-tRNA--protein transferase compare
IAI47_11700 +0.5 2.3 SH3 domain-containing protein compare
IAI47_14450 +0.5 3.4 hypothetical protein compare
IAI47_19445 +0.5 2.9 LysR family transcriptional regulator compare
IAI47_09800 +0.5 1.8 YnfA family protein compare
IAI47_12305 +0.5 2.6 hypothetical protein compare
IAI47_08960 +0.5 2.6 bifunctional nicotinamidase/pyrazinamidase compare
IAI47_06550 +0.5 1.5 hypothetical protein compare
IAI47_03865 +0.5 1.6 PTS lactose/cellobiose transporter subunit IIA compare
IAI47_20625 +0.5 1.1 DUF2946 domain-containing protein compare
IAI47_07975 +0.5 2.1 flagellar biosynthesis protein FliQ compare
IAI47_11515 +0.5 0.8 hypothetical protein compare
IAI47_19325 +0.5 1.3 transposase compare
IAI47_09615 +0.5 2.0 LysR family transcriptional regulator compare
IAI47_20290 +0.5 1.8 XapX domain-containing protein compare
IAI47_21640 +0.5 2.1 sigma-70 family RNA polymerase sigma factor compare
IAI47_08035 +0.5 0.7 flagellar hook-basal body complex protein FliE compare
IAI47_21250 +0.5 1.8 helix-turn-helix domain-containing protein compare
IAI47_07625 +0.5 1.8 GNAT family N-acetyltransferase compare
IAI47_14955 +0.5 1.0 phosphate starvation-inducible protein compare
IAI47_18515 +0.4 3.1 ECA polysaccharide chain length modulation protein compare
IAI47_15460 +0.4 1.7 ribonuclease HII compare
IAI47_17075 +0.4 1.5 ribosome assembly RNA-binding protein YhbY compare
IAI47_08855 +0.4 2.2 septum site-determining protein MinC compare
IAI47_16545 +0.4 2.7 restriction endonuclease subunit S compare
IAI47_08465 +0.4 2.6 zinc ABC transporter substrate-binding protein ZnuA compare
IAI47_11640 +0.4 2.3 hypothetical protein compare
IAI47_08160 +0.4 2.4 RNA polymerase sigma factor FliA compare
IAI47_15260 +0.4 1.7 amino acid ABC transporter permease compare
IAI47_03740 +0.4 2.1 cell division protein ZapA compare
IAI47_12665 +0.4 1.4 ribosome modulation factor compare
IAI47_09945 +0.4 1.7 hydroxyisourate hydrolase compare
IAI47_19585 +0.4 3.4 EAL domain-containing protein compare
IAI47_21565 +0.4 2.1 FAD-dependent oxidoreductase compare
IAI47_11850 +0.4 1.4 hypothetical protein compare
IAI47_09900 +0.4 1.1 type II toxin-antitoxin system antitoxin HipB compare
IAI47_06655 +0.4 1.0 1-phosphofructokinase compare
IAI47_19940 +0.4 1.2 hypothetical protein compare
IAI47_14040 +0.4 3.6 D-alanyl-D-alanine carboxypeptidase DacA compare
IAI47_05510 +0.4 2.8 putative DNA-binding transcriptional regulator compare
IAI47_19685 +0.4 1.7 hypothetical protein compare
IAI47_08015 +0.4 2.8 flagellum-specific ATP synthase FliI compare
IAI47_14470 +0.4 1.2 YbaB/EbfC family nucleoid-associated protein compare
IAI47_11375 +0.4 0.6 hypothetical protein compare
IAI47_01690 +0.4 3.5 glucose-1-phosphate adenylyltransferase compare
IAI47_09410 +0.4 1.1 phage shock protein PspD compare
IAI47_11260 +0.4 1.6 SirB2 family protein compare
IAI47_15350 +0.4 2.9 endonuclease/exonuclease/phosphatase family protein compare
IAI47_17785 +0.4 3.5 oligosaccharide flippase family protein compare
IAI47_20440 +0.4 1.5 SDR family oxidoreductase compare
IAI47_05120 +0.4 1.1 DUF2158 domain-containing protein compare
IAI47_08470 +0.4 3.4 murein DD-endopeptidase MepM compare
IAI47_12160 +0.4 2.2 flagellar basal body rod protein FlgC compare
IAI47_04800 +0.4 0.5 RnfH family protein compare
IAI47_06900 +0.4 1.6 phosphatase PAP2 family protein compare
IAI47_19315 +0.4 1.6 type II toxin-antitoxin system Phd/YefM family antitoxin compare
IAI47_09845 +0.4 1.5 hypothetical protein compare
IAI47_21475 +0.4 2.1 type VI secretion system tube protein Hcp compare
IAI47_14660 +0.4 2.5 trigger factor compare
IAI47_12680 +0.4 3.2 membrane integrity-associated transporter subunit PqiA compare
IAI47_07880 +0.4 1.7 hypothetical protein compare
IAI47_13710 +0.4 1.1 cyd operon protein YbgE compare
IAI47_08345 +0.4 2.8 flagellar type III secretion system protein FlhB compare
IAI47_01230 +0.4 2.1 K(+)-transporting ATPase subunit F compare
IAI47_08670 +0.4 1.1 DUF1272 domain-containing protein compare
IAI47_01875 +0.4 1.4 hypothetical protein compare
IAI47_14750 +0.4 1.9 phosphatidylglycerophosphatase A compare
IAI47_12155 +0.4 2.7 flagellar hook assembly protein FlgD compare
IAI47_12150 +0.4 3.0 flagellar hook protein FlgE compare
IAI47_00730 +0.4 0.8 glutaredoxin 3 compare
IAI47_04275 +0.4 2.9 lytic murein transglycosylase B compare
IAI47_20640 +0.4 1.5 hypothetical protein compare
IAI47_21345 +0.4 1.6 DUF1471 domain-containing protein compare
IAI47_04220 +0.4 1.7 5'/3'-nucleotidase SurE compare
IAI47_10290 +0.4 1.4 barstar family protein compare
IAI47_14495 +0.4 1.1 hypothetical protein compare
IAI47_02475 +0.4 2.0 AaeX family protein compare
IAI47_05080 +0.4 1.1 zinc ribbon domain-containing protein compare
IAI47_11535 +0.4 0.6 DcrB-related protein compare
IAI47_17140 +0.4 2.9 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
IAI47_21765 +0.4 0.6 YoeB-YefM toxin-antitoxin system antitoxin YefM compare
IAI47_07435 +0.4 1.9 hypothetical protein compare
IAI47_05140 +0.4 1.2 DUF2633 family protein compare
IAI47_14965 +0.4 0.9 hypothetical protein compare
IAI47_04235 +0.4 3.1 RNA polymerase sigma factor RpoS compare
IAI47_08705 +0.4 2.9 carboxy terminal-processing peptidase compare
IAI47_01810 +0.4 2.5 transcription elongation factor GreB compare
IAI47_18920 +0.4 1.8 TetR/AcrR family transcriptional regulator compare
IAI47_12790 +0.4 0.3 chromosome partition protein MukE compare
IAI47_21830 +0.4 0.4 hypothetical protein compare
IAI47_18415 +0.4 1.3 lipoprotein compare
IAI47_07350 +0.4 0.4 hypothetical protein compare
IAI47_20310 +0.4 1.7 DoxX family protein compare
IAI47_02775 +0.4 1.2 glycine dehydrogenase compare
IAI47_11975 +0.4 2.9 transcription-repair coupling factor compare
IAI47_13300 +0.4 1.2 GNAT family N-acetyltransferase compare
IAI47_20400 +0.4 1.8 DUF2132 domain-containing protein compare
IAI47_19080 +0.4 1.1 hypothetical protein compare
IAI47_08025 +0.4 1.9 flagellar motor switch protein FliG compare
IAI47_07910 +0.4 2.7 DNA (cytosine-5-)-methyltransferase compare
IAI47_17980 +0.4 1.6 capsule biosynthesis GfcC family protein compare
IAI47_18985 +0.4 1.4 MarR family transcriptional regulator compare
IAI47_05195 +0.4 0.5 DnaA inactivator Hda compare
IAI47_08455 +0.4 1.8 zinc ABC transporter permease subunit ZnuB compare
IAI47_21520 +0.3 1.5 YgdI/YgdR family lipoprotein compare
IAI47_16425 +0.3 2.4 MHS family MFS transporter compare
IAI47_11325 +0.3 1.5 P1 family peptidase compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Manganese (II) chloride tetrahydrate across organisms