Experiment set2IT073 for Burkholderia phytofirmans PsJN

Compare to:

Xylitol carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS16045 +3.8 20.0 actin conserved
BPHYT_RS18935 +2.1 13.9 flagellar biosynthesis regulator FlhF compare
BPHYT_RS14655 +1.8 13.4 Fis family transcriptional regulator compare
BPHYT_RS04015 +1.8 5.2 glycosyl transferase compare
BPHYT_RS03975 +1.8 8.9 AraC family transcriptional regulator compare
BPHYT_RS18945 +1.8 11.6 flagellar biosynthesis protein FlhB compare
BPHYT_RS18925 +1.8 10.5 RNA polymerase sigma70 compare
BPHYT_RS18900 +1.8 14.2 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS18940 +1.7 12.6 flagellar biosynthesis protein FlhA compare
BPHYT_RS04035 +1.7 5.6 transferase compare
BPHYT_RS18860 +1.7 7.6 flagellar P-ring protein FlgI compare
BPHYT_RS18785 +1.7 4.0 flagellar assembly protein FliH compare
BPHYT_RS18825 +1.7 8.0 flagellar biosynthesis protein FliP compare
BPHYT_RS04045 +1.7 8.9 acyltransferase compare
BPHYT_RS03980 +1.6 9.6 mannose-1-phosphate guanyltransferase compare
BPHYT_RS18795 +1.6 5.3 flagellar export protein FliJ compare
BPHYT_RS08490 +1.6 5.7 Crp/Fnr family transcriptional regulator compare
BPHYT_RS04005 +1.6 3.8 GDP-L-fucose synthase compare
BPHYT_RS18830 +1.5 9.2 flagellar biosynthesis protein FliQ compare
BPHYT_RS04000 +1.5 8.2 GDP-mannose 4,6-dehydratase compare
BPHYT_RS18790 +1.5 7.8 ATP synthase compare
BPHYT_RS04050 +1.5 8.4 group 1 glycosyl transferase compare
BPHYT_RS18835 +1.5 2.5 flagellar biosynthesis protein FliR compare
BPHYT_RS04055 +1.5 9.5 PST family polysaccharide export protein compare
BPHYT_RS18895 +1.4 6.0 flagellar basal body rod protein FlgB compare
BPHYT_RS15730 +1.3 10.0 isocitrate dehydrogenase compare
BPHYT_RS13715 +1.3 4.8 hypothetical protein compare
BPHYT_RS16085 +1.3 6.6 DeoR faimly transcriptional regulator compare
BPHYT_RS18780 +1.3 8.0 flagellar motor switch protein FliG compare
BPHYT_RS03280 +1.3 2.9 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS18800 +1.3 6.1 flagellar hook-length control protein compare
BPHYT_RS04010 +1.2 2.1 glycosyl transferase compare
BPHYT_RS18875 +1.2 5.5 flagellar basal body rod protein FlgF compare
BPHYT_RS18890 +1.2 4.1 flagellar basal body rod protein FlgC compare
BPHYT_RS16335 +1.2 1.7 membrane protein compare
BPHYT_RS18880 +1.2 8.1 flagellar hook protein FlgE compare
BPHYT_RS09755 +1.2 2.3 glycosyl transferase family 1 compare
BPHYT_RS18775 +1.2 8.3 flagellar M-ring protein FliF compare
BPHYT_RS27180 +1.2 4.8 GntR family transcriptional regulator compare
BPHYT_RS02660 +1.1 1.6 membrane protein compare
BPHYT_RS07425 +1.1 2.1 hypothetical protein compare
BPHYT_RS33990 +1.1 1.4 ATPase compare
BPHYT_RS18885 +1.1 3.9 flagellar basal body rod modification protein FlgD compare
BPHYT_RS18810 +1.1 5.0 flagellar motor switch protein FliM compare
BPHYT_RS03990 +1.1 4.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS35215 +1.1 1.1 dehydrogenase compare
BPHYT_RS20790 +1.1 2.2 TetR family transcriptional regulator compare
BPHYT_RS13555 +1.1 2.4 acyl-CoA dehydrogenase compare
BPHYT_RS20630 +1.0 1.6 patatin compare
BPHYT_RS18870 +1.0 5.7 flagellar basal body rod protein FlgG compare
BPHYT_RS30945 +1.0 4.1 LacI family transcriptional regulator compare
BPHYT_RS05085 +1.0 4.1 LysR family transcriptional regulator compare
BPHYT_RS30365 +1.0 1.2 beta-lactamase compare
BPHYT_RS28930 +1.0 1.4 chromosome partitioning protein ParA compare
BPHYT_RS01455 +1.0 1.2 peptide deformylase compare
BPHYT_RS04040 +1.0 3.9 hypothetical protein compare
BPHYT_RS22730 +1.0 4.1 serine/threonine kinase compare
BPHYT_RS00380 +1.0 2.5 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS13080 +1.0 1.4 hypothetical protein compare
BPHYT_RS28535 +1.0 1.2 response regulator receiver compare
BPHYT_RS30265 +1.0 1.4 hypothetical protein compare
BPHYT_RS09850 +1.0 1.9 molybdopterin oxidoreductase compare
BPHYT_RS21235 +1.0 3.0 hypothetical protein compare
BPHYT_RS14340 +1.0 6.5 Fis family transcriptional regulator compare
BPHYT_RS03985 +0.9 6.0 undecaprenyl-phosphate glucose phosphotransferase compare
BPHYT_RS02100 +0.9 1.6 AsnC family transcriptional regulator compare
BPHYT_RS25210 +0.9 1.2 drug:proton antiporter compare
BPHYT_RS30200 +0.9 4.2 FAD-dependent oxidoreductase compare
BPHYT_RS22820 +0.9 1.6 hydrolase compare
BPHYT_RS20505 +0.9 1.5 carboxymethylenebutenolidase compare
BPHYT_RS03995 +0.9 2.1 protein tyrosine kinase compare
BPHYT_RS01985 +0.9 2.7 hypothetical protein compare
BPHYT_RS07665 +0.9 2.1 hypothetical protein compare
BPHYT_RS34665 +0.9 1.8 hypothetical protein compare
BPHYT_RS02010 +0.9 1.4 copper homeostasis protein CutC compare
BPHYT_RS32150 +0.9 1.6 hypothetical protein compare
BPHYT_RS12290 +0.9 1.8 universal stress protein UspA compare
BPHYT_RS07570 +0.9 1.2 hypothetical protein compare
BPHYT_RS18855 +0.9 4.7 flagellar rod assembly protein FlgJ compare
BPHYT_RS05190 +0.9 4.2 ADP-heptose--LPS heptosyltransferase compare
BPHYT_RS28370 +0.9 1.3 peroxidase compare
BPHYT_RS11180 +0.9 4.0 SpoVR family protein compare
BPHYT_RS13170 +0.8 2.3 ATPase compare
BPHYT_RS20880 +0.8 1.0 polyketide cyclase compare
BPHYT_RS17240 +0.8 1.3 cell division protein FtsW compare
BPHYT_RS01625 +0.8 3.7 chemotaxis protein CheY compare
BPHYT_RS02770 +0.8 5.1 membrane protein compare
BPHYT_RS04140 +0.8 4.1 polysaccharide biosynthesis protein compare
BPHYT_RS32210 +0.8 0.5 hypothetical protein compare
BPHYT_RS28215 +0.8 1.9 D-ribose transporter ATP binding protein compare
BPHYT_RS07920 +0.8 1.9 hypothetical protein compare
BPHYT_RS29675 +0.8 2.5 flagellar motor protein MotB compare
BPHYT_RS32495 +0.8 1.7 ABC transporter compare
BPHYT_RS29330 +0.8 1.8 acetyltransferase compare
BPHYT_RS18970 +0.8 5.5 chemotaxis protein compare
BPHYT_RS30890 +0.8 1.4 hypothetical protein compare
BPHYT_RS24580 +0.8 1.3 hypothetical protein compare
BPHYT_RS34330 +0.8 4.0 hypothetical protein compare
BPHYT_RS23435 +0.8 1.9 MFS transporter compare
BPHYT_RS11610 +0.8 2.4 peroxiredoxin compare
BPHYT_RS13765 +0.8 2.5 LysR family transcriptional regulator compare
BPHYT_RS34570 +0.8 2.1 chemotaxis protein CheA compare
BPHYT_RS11980 +0.8 1.4 LysR family transcriptional regulator compare
BPHYT_RS20690 +0.7 2.0 ABC transporter permease compare
BPHYT_RS28900 +0.7 1.2 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BPHYT_RS26265 +0.7 3.0 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS28595 +0.7 1.1 glyoxalase compare
BPHYT_RS03455 +0.7 1.8 paraquat-inducible protein A compare
BPHYT_RS20115 +0.7 1.7 transcriptional regulator compare
BPHYT_RS29410 +0.7 2.3 HPr kinase compare
BPHYT_RS05330 +0.7 1.7 phosphohydrolase compare
BPHYT_RS01115 +0.7 1.7 hypothetical protein compare
BPHYT_RS09910 +0.7 2.3 tyramine oxidase compare
BPHYT_RS18930 +0.7 1.8 flagellar biosynthesis protein FlhG compare
BPHYT_RS21925 +0.7 1.4 formimidoylglutamase compare
BPHYT_RS08595 +0.7 2.3 multidrug transporter compare
BPHYT_RS35480 +0.7 1.6 salicylyl-CoA 5-hydroxylase compare
BPHYT_RS22325 +0.7 3.1 histidine kinase compare
BPHYT_RS22755 +0.7 2.9 LacI family transcription regulator compare
BPHYT_RS27330 +0.7 1.3 hypothetical protein compare
BPHYT_RS22835 +0.7 0.9 flagellar motor protein MotA compare
BPHYT_RS05575 +0.7 5.2 Fis family transcriptional regulator compare
BPHYT_RS32960 +0.7 2.2 short-chain dehydrogenase compare
BPHYT_RS27505 +0.7 2.2 hypothetical protein compare
BPHYT_RS08190 +0.7 1.0 type II secretion system protein compare
BPHYT_RS31400 +0.7 0.8 methyl-accepting chemotaxis protein compare
BPHYT_RS10400 +0.7 0.9 taurine ABC transporter permease compare
BPHYT_RS26570 +0.7 0.9 5'-nucleotidase compare
BPHYT_RS02575 +0.7 4.5 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS25440 +0.7 1.6 alanine dehydrogenase compare
BPHYT_RS10305 +0.7 1.4 hypothetical protein compare
BPHYT_RS25980 +0.7 0.8 urea carboxylase compare
BPHYT_RS04315 +0.7 4.7 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS11230 +0.7 2.5 hypothetical protein compare
BPHYT_RS24440 +0.7 2.5 type VI secretion protein compare
BPHYT_RS23615 +0.7 2.0 XRE family transcriptional regulator compare
BPHYT_RS11005 +0.7 1.7 chromate transporter compare
BPHYT_RS33400 +0.7 2.2 magnesium transporter CorA compare
BPHYT_RS11965 +0.7 2.3 alkylhydroperoxidase compare
BPHYT_RS15585 +0.7 1.7 acetyltransferase compare
BPHYT_RS06090 +0.7 2.4 TetR family transcriptional regulator compare
BPHYT_RS13925 +0.7 2.9 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) compare
BPHYT_RS29515 +0.7 3.4 spermidine/putrescine ABC transporter substrate-binding protein compare
BPHYT_RS05570 +0.7 1.3 hypothetical protein compare
BPHYT_RS18420 +0.7 1.4 hypothetical protein compare
BPHYT_RS36460 +0.7 0.9 hypothetical protein compare
BPHYT_RS17410 +0.7 3.7 adenylate cyclase compare
BPHYT_RS10230 +0.7 1.8 hypothetical protein compare
BPHYT_RS11275 +0.6 1.9 hypothetical protein compare
BPHYT_RS10900 +0.6 1.9 histidine kinase compare
BPHYT_RS31205 +0.6 1.4 peptide ABC transporter ATP-binding protein compare
BPHYT_RS17760 +0.6 3.1 ABC transporter permease compare
BPHYT_RS32605 +0.6 1.7 hypothetical protein compare
BPHYT_RS32240 +0.6 0.9 chromosome replication initiation inhibitor protein compare
BPHYT_RS01815 +0.6 3.0 sugar ABC transporter permease compare
BPHYT_RS10040 +0.6 0.8 hypothetical protein compare
BPHYT_RS16815 +0.6 1.4 ureidoglycolate hydrolase compare
BPHYT_RS11425 +0.6 2.6 chemotaxis protein compare
BPHYT_RS22875 +0.6 2.4 hypothetical protein compare
BPHYT_RS26715 +0.6 1.3 GTP-binding protein compare
BPHYT_RS23960 +0.6 2.6 sugar ABC transporter compare
BPHYT_RS36495 +0.6 1.9 peptidase compare
BPHYT_RS27545 +0.6 1.8 histidine kinase compare
BPHYT_RS10860 +0.6 1.7 transcriptional regulator compare
BPHYT_RS27250 +0.6 1.0 NAD-dependent epimerase/dehydratase compare
BPHYT_RS13420 +0.6 2.5 hypothetical protein compare
BPHYT_RS30880 +0.6 2.0 peptidase S13 compare
BPHYT_RS23410 +0.6 2.0 hypothetical protein compare
BPHYT_RS29820 +0.6 1.3 hypothetical protein compare
BPHYT_RS01920 +0.6 4.2 AsnC family transcriptional regulator compare
BPHYT_RS21585 +0.6 1.5 short-chain dehydrogenase compare
BPHYT_RS31960 +0.6 1.4 hypothetical protein compare
BPHYT_RS18820 +0.6 1.1 flagellar biosynthesis protein FliO compare
BPHYT_RS33820 +0.6 4.9 histidine kinase compare
BPHYT_RS23930 +0.6 2.3 triphosphoribosyl-dephospho-CoA synthase compare
BPHYT_RS25565 +0.6 1.9 hypothetical protein compare
BPHYT_RS33125 +0.6 0.9 hypothetical protein compare
BPHYT_RS30300 +0.6 2.7 FMN reductase compare
BPHYT_RS31795 +0.6 2.9 aldo/keto reductase compare
BPHYT_RS32110 +0.6 2.1 transcriptional regulator compare
BPHYT_RS04145 +0.6 2.9 family 2 glycosyl transferase compare
BPHYT_RS29130 +0.6 2.3 RND transporter MFP subunit compare
BPHYT_RS04125 +0.6 4.1 hypothetical protein compare
BPHYT_RS34575 +0.6 2.5 phospholipase compare
BPHYT_RS26530 +0.6 1.5 amino acid dehydrogenase compare
BPHYT_RS20520 +0.6 0.9 transcriptional regulator compare
BPHYT_RS34135 +0.6 2.4 glutathione S-transferase compare
BPHYT_RS34460 +0.6 2.9 glutamate/aspartate transporter permease GltK compare
BPHYT_RS05560 +0.6 4.4 Fis family transcriptional regulator compare
BPHYT_RS05385 +0.6 2.4 short-chain dehydrogenase compare
BPHYT_RS23035 +0.6 1.0 hypothetical protein compare
BPHYT_RS36220 +0.6 0.8 hypothetical protein compare
BPHYT_RS25815 +0.6 0.8 deoxyribose-phosphate aldolase compare
BPHYT_RS12500 +0.6 1.6 hypothetical protein compare
BPHYT_RS36540 +0.6 1.6 hypothetical protein compare
BPHYT_RS19490 +0.6 2.7 amino acid ABC transporter ATP-binding protein compare
BPHYT_RS13910 +0.6 2.3 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data) compare
BPHYT_RS22470 +0.6 0.9 hydrolase compare
BPHYT_RS23030 +0.6 1.0 gluconate 2-dehydrogenase compare
BPHYT_RS22045 +0.6 2.0 peptide ABC transporter permease compare


Specific Phenotypes

For 14 genes in this experiment

For carbon source Xylitol in Burkholderia phytofirmans PsJN

For carbon source Xylitol across organisms