Experiment set2IT072 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04215 +1.4 10.9 DMT family transporter compare
MMJJ_RS09380 +1.4 4.2 hypothetical protein compare
MMJJ_RS08720 +1.4 10.4 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS05870 +1.2 3.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS05035 +1.2 5.6 4Fe-4S binding protein compare
MMJJ_RS06130 +1.2 4.3 hypothetical protein compare
MMJJ_RS04720 +1.2 1.2 IMP dehydrogenase compare
MMJJ_RS06055 +1.1 6.6 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS02860 +1.1 3.1 site-specific integrase compare
MMJJ_RS09265 +1.1 2.8 hypothetical protein compare
MMJJ_RS08025 +1.0 2.4 hypothetical protein compare
MMJJ_RS00420 +1.0 4.6 CBS domain-containing protein conserved
MMJJ_RS09130 +1.0 1.4 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS04480 +1.0 2.2 hypothetical protein compare
MMJJ_RS09295 +1.0 0.8 hypothetical protein compare
MMJJ_RS03380 +1.0 2.8 hypothetical protein compare
MMJJ_RS02905 +1.0 2.7 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS08730 +1.0 7.0 glycosyltransferase family 4 protein compare
MMJJ_RS08225 +1.0 2.9 peptidylprolyl isomerase compare
MMJJ_RS07225 +1.0 5.2 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS07235 +1.0 6.8 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS04415 +0.9 3.8 hypothetical protein compare
MMJJ_RS03185 +0.9 1.2 alanine--tRNA ligase compare
MMJJ_RS05525 +0.9 4.5 GTP-binding protein compare
MMJJ_RS01210 +0.9 1.3 hypothetical protein compare
MMJJ_RS00525 +0.8 2.0 Dabb family protein compare
MMJJ_RS06105 +0.8 4.2 DUF99 family protein compare
MMJJ_RS08750 +0.8 5.5 glycosyltransferase compare
MMJJ_RS05915 +0.8 1.6 multiprotein bridging factor aMBF1 compare
MMJJ_RS06275 +0.8 2.7 hypothetical protein compare
MMJJ_RS07825 +0.8 2.8 YciI family protein compare
MMJJ_RS07970 +0.8 0.8 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS02000 +0.8 2.5 AzlD domain-containing protein compare
MMJJ_RS08760 +0.8 4.2 glycosyltransferase family 9 protein compare
MMJJ_RS07500 +0.8 4.5 hypothetical protein compare
MMJJ_RS05530 +0.8 3.1 roadblock/LC7 domain-containing protein compare
MMJJ_RS04055 +0.8 2.6 hypothetical protein compare
MMJJ_RS08370 +0.8 2.4 hypothetical protein compare
MMJJ_RS07230 +0.7 4.1 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS05695 +0.7 3.9 class III signal peptide-containing protein compare
MMJJ_RS05700 +0.7 4.0 metallophosphoesterase compare
MMJJ_RS06430 +0.7 3.5 haloacid dehalogenase compare
MMJJ_RS08065 +0.7 0.9 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS08810 +0.7 0.6 DUF4040 domain-containing protein compare
MMJJ_RS07025 +0.7 2.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS04245 +0.7 3.1 flavoprotein compare
MMJJ_RS06800 +0.7 2.7 prefoldin subunit alpha compare
MMJJ_RS01010 +0.7 6.2 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06465 +0.7 2.8 hypothetical protein compare
MMJJ_RS08780 +0.7 2.5 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS05660 +0.7 2.8 sulfopyruvate decarboxylase subunit beta compare
MMJJ_RS03370 +0.7 2.0 hypothetical protein compare
MMJJ_RS09325 +0.7 2.5 hypothetical protein compare
MMJJ_RS06770 +0.7 4.3 hypothetical protein compare
MMJJ_RS08725 +0.6 4.2 flippase compare
MMJJ_RS06975 +0.6 1.3 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08785 +0.6 2.8 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS07030 +0.6 4.8 hypothetical protein compare
MMJJ_RS06090 +0.6 2.9 hypothetical protein compare
MMJJ_RS00415 +0.6 2.1 DedA family protein compare
MMJJ_RS05505 +0.6 5.8 hypothetical protein compare
MMJJ_RS05510 +0.6 3.1 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS07220 +0.6 4.2 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06210 +0.6 2.5 hypothetical protein compare
MMJJ_RS00665 +0.6 4.8 lysine 2,3-aminomutase compare
MMJJ_RS01125 +0.6 2.5 hypothetical protein compare
MMJJ_RS05335 +0.6 2.2 heavy metal-binding domain-containing protein compare
MMJJ_RS07660 +0.6 2.8 carbonic anhydrase compare
MMJJ_RS09050 +0.6 1.6 hypothetical protein compare
MMJJ_RS09405 +0.6 1.4 hypothetical protein compare
MMJJ_RS07505 +0.6 0.4 DNA-directed RNA polymerase subunit K compare
MMJJ_RS06450 +0.6 3.3 DUF3343 domain-containing protein compare
MMJJ_RS07210 +0.6 3.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS09390 +0.6 0.8 hypothetical protein compare
MMJJ_RS04525 +0.6 2.3 hypothetical protein compare
MMJJ_RS05925 +0.6 3.3 DUF2099 family protein compare
MMJJ_RS02285 +0.6 2.0 class III signal peptide-containing protein compare
MMJJ_RS01100 +0.6 0.7 helix-turn-helix domain-containing protein compare
MMJJ_RS08365 +0.6 2.0 DsrE family protein compare
MMJJ_RS07620 +0.6 3.3 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS06765 +0.6 3.9 hypothetical protein compare
MMJJ_RS06445 +0.6 4.4 hypothetical protein compare
MMJJ_RS05815 +0.6 1.6 hypothetical protein compare
MMJJ_RS03425 +0.5 1.7 DUF2080 family transposase-associated protein compare
MMJJ_RS07905 +0.5 2.6 DUF89 domain-containing protein compare
MMJJ_RS05980 +0.5 2.1 DUF5400 domain-containing protein compare
MMJJ_RS07765 +0.5 1.9 DMT family protein compare
MMJJ_RS06160 +0.5 2.9 stage II sporulation protein M compare
MMJJ_RS06470 +0.5 2.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS07645 +0.5 2.4 selenium-binding protein compare
MMJJ_RS01285 +0.5 1.7 CopG family ribbon-helix-helix protein compare
MMJJ_RS06960 +0.5 3.7 CAP domain-containing protein compare
MMJJ_RS07270 +0.5 2.4 ribonuclease HII compare
MMJJ_RS06075 +0.5 2.5 DNA-binding protein Alba compare
MMJJ_RS06190 +0.5 2.8 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06455 +0.5 2.9 YeeE/YedE family protein compare
MMJJ_RS00440 +0.5 2.8 selenide, water dikinase SelD compare
MMJJ_RS03350 +0.5 0.6 hypothetical protein compare
MMJJ_RS01590 +0.5 0.4 adenine phosphoribosyltransferase compare
MMJJ_RS08040 +0.5 2.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS05985 +0.5 2.1 ABC transporter substrate-binding protein compare
MMJJ_RS06675 +0.5 2.6 TIGR01212 family radical SAM protein compare
MMJJ_RS08345 +0.5 2.7 flavodoxin family protein compare
MMJJ_RS05730 +0.5 2.7 TIM barrel protein compare
MMJJ_RS07610 +0.5 1.7 DUF2119 domain-containing protein compare
MMJJ_RS07740 +0.5 2.1 DUF2334 domain-containing protein compare
MMJJ_RS06045 +0.5 2.4 hypothetical protein compare
MMJJ_RS07010 +0.5 2.0 preprotein translocase subunit Sec61beta compare
MMJJ_RS09010 +0.5 1.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS05400 +0.4 1.2 CoA-binding protein compare
MMJJ_RS06505 +0.4 1.3 prephenate dehydratase compare
MMJJ_RS01650 +0.4 3.2 acetolactate synthase large subunit compare
MMJJ_RS03715 +0.4 2.1 hypothetical protein compare
MMJJ_RS06580 +0.4 2.6 alanine dehydrogenase compare
MMJJ_RS06720 +0.4 2.5 mechanosensitive ion channel family protein compare
MMJJ_RS05495 +0.4 2.2 MinD/ParA family protein compare
MMJJ_RS06495 +0.4 0.9 hypothetical protein compare
MMJJ_RS06205 +0.4 2.1 EamA family transporter compare
MMJJ_RS05955 +0.4 2.7 radical SAM protein compare
MMJJ_RS03410 +0.4 0.7 hypothetical protein compare
MMJJ_RS02100 +0.4 1.8 hypothetical protein compare
MMJJ_RS02665 +0.4 0.7 methyl-accepting chemotaxis protein compare
MMJJ_RS05365 +0.4 1.5 DUF2798 domain-containing protein compare
MMJJ_RS08075 +0.4 2.7 ATP-dependent DNA helicase compare
MMJJ_RS09155 +0.4 2.4 RluA family pseudouridine synthase compare
MMJJ_RS06550 +0.4 2.4 ABC transporter permease compare
MMJJ_RS06515 +0.4 2.2 ribonuclease III compare
MMJJ_RS03725 +0.4 1.0 sulfurtransferase TusA family protein compare
MMJJ_RS05205 +0.4 2.2 DUF2118 domain-containing protein compare
MMJJ_RS09365 +0.4 0.9 hypothetical protein compare
MMJJ_RS06440 +0.4 2.0 DUF4870 domain-containing protein compare
MMJJ_RS08705 +0.4 1.9 AEC family transporter compare
MMJJ_RS00785 +0.4 0.7 hypothetical protein compare
MMJJ_RS04945 +0.4 2.0 PLP-dependent aminotransferase family protein compare
MMJJ_RS00480 +0.4 2.4 flippase compare
MMJJ_RS04585 +0.4 1.5 phenylacetate--CoA ligase compare
MMJJ_RS04365 +0.4 1.3 helix-turn-helix transcriptional regulator compare
MMJJ_RS06120 +0.4 2.0 DUF4013 domain-containing protein compare
MMJJ_RS00115 +0.4 1.1 hypothetical protein compare
MMJJ_RS05965 +0.4 2.5 MFS transporter compare
MMJJ_RS06685 +0.4 2.8 S-layer protein compare
MMJJ_RS00940 +0.4 2.6 aldo/keto reductase compare
MMJJ_RS01205 +0.4 2.1 DNA adenine methylase compare
MMJJ_RS06235 +0.4 2.6 IGHMBP2 family helicase compare
MMJJ_RS09030 +0.4 2.5 hypothetical protein compare
MMJJ_RS08360 +0.4 2.3 FprA family A-type flavoprotein compare
MMJJ_RS07810 +0.4 1.6 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS08775 +0.4 1.9 PfkB family carbohydrate kinase compare
MMJJ_RS06285 +0.4 1.5 YchF/TatD family DNA exonuclease compare
MMJJ_RS05235 +0.4 2.7 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS06280 +0.3 2.3 hypothetical protein compare
MMJJ_RS06585 +0.3 1.9 alanine racemase compare
MMJJ_RS05890 +0.3 2.2 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS01515 +0.3 0.9 DUF2178 domain-containing protein compare
MMJJ_RS05240 +0.3 2.5 type II secretion system F family protein compare
MMJJ_RS07385 +0.3 2.0 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS06115 +0.3 1.8 pyruvate kinase compare
MMJJ_RS05500 +0.3 2.6 hypothetical protein compare
MMJJ_RS06480 +0.3 1.5 hypothetical protein compare
MMJJ_RS05250 +0.3 1.4 HDIG domain-containing protein compare
MMJJ_RS03605 +0.3 0.9 TIGR00297 family protein compare
MMJJ_RS03700 +0.3 1.4 hypothetical protein compare
MMJJ_RS06500 +0.3 1.4 class I SAM-dependent methyltransferase compare
MMJJ_RS01265 +0.3 1.1 cupin domain-containing protein compare
MMJJ_RS08385 +0.3 1.8 class II SORL domain-containing protein compare
MMJJ_RS04090 +0.3 2.1 hypothetical protein compare
MMJJ_RS08400 +0.3 0.7 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS06710 +0.3 2.0 TldD/PmbA family protein compare
MMJJ_RS06460 +0.3 1.6 cytochrome c compare
MMJJ_RS02115 +0.3 1.7 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS08350 +0.3 2.4 heavy metal translocating P-type ATPase compare
MMJJ_RS03610 +0.3 1.8 HIT family protein compare
MMJJ_RS01770 +0.3 0.8 TOBE domain-containing protein compare
MMJJ_RS03530 +0.3 1.8 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS00295 +0.3 1.6 response regulator compare
MMJJ_RS05605 +0.3 1.2 hypothetical protein compare
MMJJ_RS03475 +0.3 1.9 tyrosine-type recombinase/integrase compare
MMJJ_RS04785 +0.3 1.3 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS02290 +0.3 1.7 MarR family transcriptional regulator compare
MMJJ_RS00930 +0.3 1.3 queuosine precursor transporter compare
MMJJ_RS07255 +0.3 2.3 hypothetical protein compare
MMJJ_RS05150 +0.3 1.7 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS06810 +0.3 1.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS05355 +0.3 1.4 DUF2121 domain-containing protein compare
MMJJ_RS03385 +0.3 1.2 hypothetical protein compare
MMJJ_RS07815 +0.3 1.8 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS05600 +0.3 2.1 sodium:solute symporter family protein compare
MMJJ_RS07780 +0.3 1.2 DUF190 domain-containing protein compare
MMJJ_RS01980 +0.3 1.7 cation:proton antiporter compare
MMJJ_RS04180 +0.3 0.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS03695 +0.3 1.9 phenylacetate--CoA ligase compare
MMJJ_RS05195 +0.3 0.7 hypothetical protein compare
MMJJ_RS09005 +0.3 2.2 N-6 DNA methylase compare
MMJJ_RS06950 +0.3 1.2 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07480 +0.3 1.8 FAD-dependent oxidoreductase compare
MMJJ_RS03360 +0.3 0.3 hypothetical protein compare
MMJJ_RS06135 +0.3 1.6 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS03045 +0.3 1.3 hypothetical protein compare
MMJJ_RS08295 +0.3 1.9 iron ABC transporter substrate-binding protein compare
MMJJ_RS09210 +0.3 1.3 lysine exporter LysO family protein compare


Specific Phenotypes

For 3 genes in this experiment

For nutrient t2 Sodium acetate in Methanococcus maripaludis JJ

For nutrient t2 Sodium acetate across organisms