Experiment set2IT072 for Herbaspirillum seropedicae SmR1

LB with Sodium nitrate 200 mM

Group: stress
Media: LB + Sodium nitrate (200 mM)
Culturing: HerbieS_ML4, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=750 rpm
Growth: about 3.3 generations
By: Mark on 3/10/2016
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: Herbie_SP3 A4

Specific Phenotypes

For 7 genes in this experiment

For stress Sodium nitrate in Herbaspirillum seropedicae SmR1

For stress Sodium nitrate across organisms

SEED Subsystems

Subsystem	#Specific
DNA repair, UvrABC system	1
Protein chaperones	1
Proteolysis in bacteria, ATP-dependent	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Ubiquinone and menaquinone biosynthesis
• Histidine metabolism
• Tyrosine metabolism
• Tryptophan metabolism
• Benzoxazinone biosynthesis
• Naphthalene and anthracene degradation
• Porphyrin and chlorophyll metabolism
• Carotenoid biosynthesis - General
• Phenylpropanoid biosynthesis
• Flavonoid biosynthesis
• Anthocyanin biosynthesis
• Alkaloid biosynthesis I
• Insect hormone biosynthesis
• Biosynthesis of alkaloids derived from shikimate pathway