Experiment set2IT071 for Pseudomonas fluorescens FW300-N2C3

Compare to:

L-Histidine carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
AO356_09610 -5.1 -8.6 ABC transporter for L-Histidine, ATPase component (from data) conserved
AO356_09630 -4.9 -15.7 Urocanate hydratase (EC 4.2.1.49) (from data) conserved
AO356_09635 -4.7 -9.0 histidine utilization regulatory protein hutD (from data) conserved
AO356_09595 -4.6 -10.1 Imidazolonepropionase (EC 3.5.2.7) (from data) conserved
AO356_09645 -4.5 -13.1 Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data) conserved
AO356_10100 -4.2 -13.6 formate dehydrogenase family accessory protein FdhD conserved
AO356_23240 -4.1 -8.7 hypothetical protein compare
AO356_09625 -4.0 -15.0 sulfonate ABC transporter substrate-binding protein conserved
AO356_02985 -3.9 -8.3 molybdenum cofactor biosynthesis protein B compare
AO356_02990 -3.8 -7.6 molybdenum cofactor guanylyltransferase compare
AO356_09590 -3.7 -10.8 N-formylglutamate deformylase (EC 3.5.1.68) (from data) conserved
AO356_09620 -3.7 -14.1 ABC transporter for L-Histidine, periplasmic substrate-binding component (from data) conserved
AO356_17375 -3.6 -12.6 carboxylesterase conserved
AO356_02980 -3.5 -9.9 molybdenum cofactor biosynthesis protein MoaA compare
AO356_09605 -2.8 -5.5 Histidine ammonia-lyase (EC 4.3.1.3) (from data) conserved
AO356_12710 -2.5 -8.0 hypothetical protein compare
AO356_04955 -2.4 -7.3 beta-ketoadipyl CoA thiolase compare
AO356_15380 -2.4 -7.8 hypothetical protein compare
AO356_09125 -2.4 -8.1 GntR family transcriptional regulator compare
AO356_05065 -2.2 -10.1 LacI family transcriptional regulator compare
AO356_01565 -2.0 -5.1 MerR family transcriptional regulator compare
AO356_10105 -2.0 -12.8 CbbBc protein conserved
AO356_07340 -1.8 -8.3 transcriptional regulator compare
AO356_19140 -1.8 -9.8 cobyrinic acid a,c-diamide synthase compare
AO356_27445 -1.7 -6.3 IclR family transcriptional regulator compare
AO356_11275 -1.7 -8.4 16S rRNA methyltransferase compare
AO356_11155 -1.6 -6.7 hypothetical protein compare
AO356_04605 -1.6 -6.4 histidine kinase compare
AO356_01105 -1.5 -7.3 putative hydrolase, required for lysine catabolism (from data) compare
AO356_03185 -1.4 -5.9 universal stress protein UspA compare
AO356_20300 -1.2 -5.3 transcriptional regulator compare
AO356_01595 -1.2 -5.4 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) compare
AO356_01110 -1.2 -5.3 hypothetical protein compare
AO356_14455 -1.2 -5.7 peroxiredoxin compare
AO356_17355 -1.1 -6.6 hypothetical protein compare
AO356_08845 -1.0 -6.7 metal ABC transporter ATPase compare
AO356_03480 -1.0 -6.1 methylthioribose-1-phosphate isomerase compare
AO356_05325 +1.4 10.2 branched-chain amino acid transporter permease subunit LivH compare
AO356_15440 +1.6 14.4 histidine kinase compare
AO356_05320 +1.6 12.6 leucine ABC transporter substrate-binding protein compare
AO356_22945 +1.8 12.8 peptidase M4 compare
AO356_13590 +1.9 13.8 DEAD/DEAH box helicase compare
AO356_18160 +2.1 7.9 glycine cleavage system protein T compare
AO356_20580 +2.5 16.0 hypothetical protein compare


Specific phenotypes for carbon source L-Histidine across organisms