Experiment set2IT071 for Pantoea sp. MT58

Compare to:

Uranyl Acetate Dihydrate 200 uM, aerobic

200 most important genes:

  gene name fitness t score description  
IAI47_12645 -6.6 -10.6 porin OmpA compare
IAI47_13685 -6.5 -4.3 Tol-Pal system protein TolB compare
IAI47_18530 -6.0 -4.2 thioredoxin TrxA compare
IAI47_09185 -5.9 -4.1 glutamine amidotransferase compare
IAI47_03725 -5.4 -12.5 phosphoglycerate dehydrogenase compare
IAI47_16870 -5.2 -9.4 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_03855 -5.2 -10.0 LysR family transcriptional regulator compare
IAI47_07065 -5.2 -13.9 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_07075 -5.2 -9.3 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_01030 -5.2 -18.8 branched-chain amino acid transaminase compare
IAI47_13690 -5.1 -1.7 cell envelope integrity protein TolA compare
IAI47_16205 -5.1 -10.3 threonine synthase compare
IAI47_16015 -5.1 -7.0 3-isopropylmalate dehydratase small subunit compare
IAI47_17220 -5.1 -29.6 glutamate synthase large subunit compare
IAI47_09175 -5.1 -13.5 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_09170 -5.0 -6.9 tryptophan synthase subunit beta compare
IAI47_09180 -5.0 -13.4 anthranilate phosphoribosyltransferase compare
IAI47_17225 -5.0 -23.1 sulfite reductase subunit alpha compare
IAI47_01035 -4.9 -23.6 dihydroxy-acid dehydratase compare
IAI47_16010 -4.9 -19.6 3-isopropylmalate dehydratase large subunit compare
IAI47_09190 -4.9 -14.4 anthranilate synthase component 1 compare
IAI47_13770 -4.9 -5.8 citrate synthase compare
IAI47_16005 -4.9 -13.7 3-isopropylmalate dehydrogenase compare
IAI47_01050 -4.9 -21.0 ketol-acid reductoisomerase compare
IAI47_04895 -4.9 -4.7 pyridoxine 5'-phosphate synthase compare
IAI47_05070 -4.8 -1.5 outer membrane protein assembly factor BamB compare
IAI47_12215 -4.8 -14.5 dihydroorotase compare
IAI47_13695 -4.8 -1.5 colicin uptake protein TolR compare
IAI47_03860 -4.7 -16.0 diaminopimelate decarboxylase compare
IAI47_13050 -4.7 -6.5 YbjN domain-containing protein compare
IAI47_07085 -4.7 -18.5 histidinol-phosphate transaminase compare
IAI47_00895 -4.7 -23.0 phosphoenolpyruvate carboxylase compare
IAI47_07070 -4.7 -10.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_07060 -4.7 -14.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_16350 -4.7 -12.1 phosphoserine phosphatase compare
IAI47_00880 -4.6 -19.0 cystathionine gamma-synthase compare
IAI47_04190 -4.6 -11.0 adenylyl-sulfate kinase compare
IAI47_06235 -4.6 -9.3 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_00910 -4.5 -14.0 acetylglutamate kinase compare
IAI47_06275 -4.5 -22.2 amidophosphoribosyltransferase compare
IAI47_18040 -4.5 -22.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_07090 -4.5 -13.9 histidinol dehydrogenase compare
IAI47_09165 -4.5 -9.1 tryptophan synthase subunit alpha compare
IAI47_09360 -4.5 -2.8 peptide ABC transporter ATP-binding protein SapF compare
IAI47_00455 -4.4 -14.6 nitrogen regulation protein NR(II) compare
IAI47_04410 -4.4 -21.6 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_00450 -4.4 -16.2 nitrogen regulation protein NR(I) compare
IAI47_18015 -4.3 -18.7 homoserine O-succinyltransferase compare
IAI47_16000 -4.3 -21.7 2-isopropylmalate synthase compare
IAI47_13180 -4.3 -10.0 manganese-binding transcriptional regulator MntR compare
IAI47_09010 -4.3 -12.0 formyltetrahydrofolate deformylase compare
IAI47_16210 -4.3 -12.9 homoserine kinase compare
IAI47_18045 -4.3 -13.2 phosphoribosylamine--glycine ligase compare
IAI47_16215 -4.3 -21.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_00920 -4.3 -18.7 argininosuccinate lyase compare
IAI47_04705 -4.2 -2.3 hypothetical protein compare
IAI47_15115 -4.2 -10.5 glutamate-5-semialdehyde dehydrogenase compare
IAI47_14355 -4.1 -13.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_07080 -4.1 -13.5 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_00905 -4.1 -13.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_13745 -4.1 -4.8 2-oxoglutarate dehydrogenase E1 component compare
IAI47_16085 -4.0 -2.8 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
IAI47_12865 -4.0 -12.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_16830 -4.0 -16.3 ornithine carbamoyltransferase compare
IAI47_16080 -4.0 -10.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_15635 -4.0 -3.5 RNA polymerase-binding protein DksA compare
IAI47_05275 -3.9 -6.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_04930 -3.9 -21.7 phosphoribosylformylglycinamidine synthase compare
IAI47_17185 -3.9 -6.5 RNA polymerase factor sigma-54 compare
IAI47_03975 -3.9 -14.9 amino-acid N-acetyltransferase compare
IAI47_15120 -3.9 -9.3 glutamate 5-kinase compare
IAI47_13765 -3.9 -4.6 succinate dehydrogenase cytochrome b556 subunit compare
IAI47_12705 -3.9 -15.4 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_09305 -3.9 -4.6 cyclic di-GMP phosphodiesterase compare
IAI47_10520 -3.8 -4.5 pyridoxamine 5'-phosphate oxidase compare
IAI47_16115 -3.8 -21.1 carbamoyl-phosphate synthase large subunit compare
IAI47_13900 -3.8 -17.6 asparagine synthase B compare
IAI47_05180 -3.8 -15.1 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_00600 -3.8 -13.0 orotate phosphoribosyltransferase compare
IAI47_00780 -3.8 -2.6 6-phosphofructokinase compare
IAI47_14945 -3.7 -2.6 pyrroline-5-carboxylate reductase compare
IAI47_16860 -3.7 -15.4 aspartate carbamoyltransferase compare
IAI47_16120 -3.6 -10.4 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_00900 -3.6 -12.9 acetylornithine deacetylase compare
IAI47_00915 -3.5 -13.8 argininosuccinate synthase compare
IAI47_04160 -3.4 -11.9 phosphoadenylyl-sulfate reductase compare
IAI47_00460 -3.4 -2.3 glutamate--ammonia ligase compare
IAI47_09240 -3.4 -2.3 HTH-type transcriptional regulator CysB compare
IAI47_09275 -3.4 -9.5 orotidine-5'-phosphate decarboxylase compare
IAI47_00300 -3.3 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_18830 -3.3 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_01040 -3.3 -9.5 threonine ammonia-lyase, biosynthetic compare
IAI47_14350 -3.2 -6.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_06980 -3.2 -5.9 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_07095 -3.2 -8.6 ATP phosphoribosyltransferase compare
IAI47_12915 -3.0 -11.3 leucine-responsive transcriptional regulator Lrp compare
IAI47_03375 -3.0 -12.6 peptide chain release factor 3 compare
IAI47_04155 -2.9 -11.9 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_01365 -2.9 -2.0 inorganic phosphate transporter PitA compare
IAI47_09040 -2.9 -4.4 NAD-dependent epimerase compare
IAI47_11450 -2.8 -8.6 ankyrin repeat domain-containing protein compare
IAI47_18315 -2.7 -6.6 HTH-type transcriptional regulator MetR compare
IAI47_02695 -2.7 -10.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_18240 -2.6 -2.6 NAD(P)H-flavin reductase compare
IAI47_00655 -2.6 -7.4 glycosyltransferase family 4 protein compare
IAI47_10320 -2.6 -2.6 Rrf2 family transcriptional regulator compare
IAI47_07475 -2.6 -1.6 hypothetical protein compare
IAI47_07165 -2.5 -2.6 exodeoxyribonuclease I compare
IAI47_04150 -2.5 -11.0 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_16220 -2.5 -4.9 thr operon leader peptide compare
IAI47_04120 -2.4 -13.7 GTP diphosphokinase compare
IAI47_15540 -2.4 -9.9 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_08085 -2.4 -5.0 helix-turn-helix domain-containing protein compare
IAI47_21655 -2.4 -1.1 LacI family DNA-binding transcriptional regulator compare
IAI47_17005 -2.4 -8.9 polyribonucleotide nucleotidyltransferase compare
IAI47_21690 -2.3 -10.0 TetR/AcrR family transcriptional regulator compare
IAI47_02090 -2.3 -4.8 elongation factor Tu compare
IAI47_04835 -2.2 -8.1 ATP-dependent RNA helicase SrmB compare
IAI47_10925 -2.2 -4.1 EAL domain-containing protein compare
IAI47_14690 -2.2 -6.3 cytochrome o ubiquinol oxidase subunit III compare
IAI47_05440 -2.2 -8.3 cysteine synthase A compare
IAI47_15110 -2.2 -6.8 chromophore lyase compare
IAI47_16390 -2.2 -1.0 tRNA-Leu compare
IAI47_02400 -2.2 -1.3 YhdT family protein compare
IAI47_04175 -2.2 -8.2 uroporphyrinogen-III C-methyltransferase compare
IAI47_15810 -2.1 -4.0 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI47_17965 -2.1 -9.0 glucose-6-phosphate isomerase compare
IAI47_18145 -2.1 -3.2 elongation factor Tu compare
IAI47_09245 -2.1 -5.3 YmiA family putative membrane protein compare
IAI47_07350 -2.0 -1.1 hypothetical protein compare
IAI47_01045 -2.0 -5.5 HTH-type transcriptional activator IlvY compare
IAI47_01955 -2.0 -8.5 aspartate aminotransferase family protein compare
IAI47_02350 -2.0 -1.2 tRNA-Thr compare
IAI47_12060 -1.9 -4.7 beta-ketoacyl-ACP synthase II compare
IAI47_05465 -1.9 -5.0 bile acid:sodium symporter compare
IAI47_06370 -1.9 -5.3 NADH-quinone oxidoreductase subunit C/D compare
IAI47_12175 -1.9 -2.8 anti-sigma-28 factor FlgM compare
IAI47_17035 -1.8 -3.0 ribosome maturation factor RimP compare
IAI47_04505 -1.8 -7.4 transcriptional repressor MprA compare
IAI47_03685 -1.8 -7.6 erythrose-4-phosphate dehydrogenase compare
IAI47_11310 -1.7 -3.2 redox-regulated ATPase YchF compare
IAI47_10775 -1.7 -3.9 ribonuclease T compare
IAI47_00760 -1.7 -3.4 envelope stress response regulator transcription factor CpxR compare
IAI47_04185 -1.6 -8.4 sulfate adenylyltransferase subunit CysN compare
IAI47_18840 -1.6 -2.4 membrane protein insertion efficiency factor YidD compare
IAI47_04180 -1.6 -8.0 sulfate adenylyltransferase subunit CysD compare
IAI47_17020 -1.6 -3.2 30S ribosome-binding factor RbfA compare
IAI47_05425 -1.6 -3.7 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_04870 -1.6 -4.6 elongation factor 4 compare
IAI47_07905 -1.6 -0.8 Arc family DNA-binding protein compare
IAI47_00870 -1.6 -1.0 50S ribosomal protein L31 compare
IAI47_13740 -1.6 -1.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
IAI47_03805 -1.6 -4.5 FAD assembly factor SdhE compare
IAI47_13760 -1.5 -2.9 succinate dehydrogenase membrane anchor subunit compare
IAI47_05150 -1.5 -5.7 exopolyphosphatase compare
IAI47_06365 -1.5 -3.4 NADH-quinone oxidoreductase subunit B compare
IAI47_02305 -1.5 -4.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
IAI47_13950 -1.5 -1.1 PhoH family protein compare
IAI47_06390 -1.5 -2.7 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_06380 -1.5 -2.7 NADH-quinone oxidoreductase subunit NuoF compare
IAI47_06400 -1.5 -2.2 NADH-quinone oxidoreductase subunit J compare
IAI47_11415 -1.5 -1.7 hypothetical protein compare
IAI47_06385 -1.5 -3.9 NADH-quinone oxidoreductase subunit NuoG compare
IAI47_03680 -1.4 -7.1 transketolase compare
IAI47_08435 -1.4 -2.8 YebC/PmpR family DNA-binding transcriptional regulator compare
IAI47_18410 -1.4 -3.1 diaminopimelate epimerase compare
IAI47_14965 -1.4 -1.5 hypothetical protein compare
IAI47_13310 -1.4 -4.3 MerR family transcriptional regulator compare
IAI47_18815 -1.4 -6.0 4'-phosphopantetheinyl transferase superfamily protein compare
IAI47_15025 -1.4 -1.6 transcriptional regulator LldR compare
IAI47_21235 -1.4 -2.6 hypothetical protein compare
IAI47_15660 -1.4 -3.7 pantoate--beta-alanine ligase compare
IAI47_03610 -1.4 -2.8 YqgE/AlgH family protein compare
IAI47_05035 -1.3 -2.8 nucleoside-diphosphate kinase compare
IAI47_21600 -1.3 -2.4 EamA family transporter compare
IAI47_07795 -1.3 -4.3 phosphonate metabolism protein PhnP compare
IAI47_01135 -1.3 -0.7 hypothetical protein compare
IAI47_12930 -1.3 -2.2 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI47_03595 -1.3 -3.9 YggS family pyridoxal phosphate-dependent enzyme compare
IAI47_00465 -1.3 -4.0 ribosome-dependent GTPase TypA compare
IAI47_15600 -1.3 -1.1 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
IAI47_13635 -1.2 -5.9 quinolinate synthase NadA compare
IAI47_12410 -1.2 -3.4 MarR family transcriptional regulator compare
IAI47_02585 -1.2 -2.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
IAI47_09210 -1.2 -4.3 23S rRNA pseudouridine(2605) synthase RluB compare
IAI47_04400 -1.2 -3.6 3-deoxy-7-phosphoheptulonate synthase compare
IAI47_06270 -1.1 -5.3 colicin V production protein compare
IAI47_06415 -1.1 -2.9 NADH-quinone oxidoreductase subunit M compare
IAI47_10840 -1.1 -3.4 pyruvate kinase PykF compare
IAI47_11935 -1.1 -7.9 two-component system sensor histidine kinase PhoQ compare
IAI47_06115 -1.1 -7.6 long-chain fatty acid transporter FadL compare
IAI47_01475 -1.1 -4.4 MurR/RpiR family transcriptional regulator compare
IAI47_05420 -1.1 -0.8 PTS glucose transporter subunit IIA compare
IAI47_10050 -1.0 -2.2 hypothetical protein compare
IAI47_18540 -1.0 -3.7 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
IAI47_10890 -1.0 -7.3 FAD-binding oxidoreductase compare
IAI47_02455 -1.0 -6.3 ribonuclease G compare
IAI47_08135 -1.0 -5.0 flagellar export chaperone FliS compare
IAI47_04425 -1.0 -5.0 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
IAI47_13750 -1.0 -2.1 succinate dehydrogenase iron-sulfur subunit compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Uranyl Acetate Dihydrate across organisms