Experiment set2IT071 for Burkholderia phytofirmans PsJN

Compare to:

L-Fucose carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS18835 +1.7 2.6 flagellar biosynthesis protein FliR compare
BPHYT_RS16090 +1.5 2.5 hypothetical protein compare
BPHYT_RS03400 +1.5 2.3 ATP-dependent DNA helicase RecG compare
BPHYT_RS00955 +1.5 2.5 DNA polymerase compare
BPHYT_RS02660 +1.4 1.8 membrane protein compare
BPHYT_RS01300 +1.4 4.5 ArsR family transcriptional regulator compare
BPHYT_RS23250 +1.3 2.4 hypothetical protein compare
BPHYT_RS24040 +1.3 2.9 amino acid ABC transporter compare
BPHYT_RS18420 +1.3 2.7 hypothetical protein compare
BPHYT_RS25780 +1.2 1.8 DeoR faimly transcriptional regulator compare
BPHYT_RS06105 +1.2 1.5 hypothetical protein compare
BPHYT_RS25770 +1.2 2.1 hypothetical protein compare
BPHYT_RS18860 +1.2 5.2 flagellar P-ring protein FlgI compare
BPHYT_RS30465 +1.2 1.6 short-chain dehydrogenase compare
BPHYT_RS35215 +1.2 1.1 dehydrogenase compare
BPHYT_RS26025 +1.2 1.3 hypothetical protein compare
BPHYT_RS13080 +1.2 0.8 hypothetical protein compare
BPHYT_RS21470 +1.2 1.8 6-hydroxynicotinate reductase compare
BPHYT_RS01625 +1.2 4.0 chemotaxis protein CheY compare
BPHYT_RS01985 +1.2 2.3 hypothetical protein compare
BPHYT_RS11400 +1.2 1.9 hypothetical protein compare
BPHYT_RS23350 +1.2 2.0 NAD-dependent epimerase/dehydratase compare
BPHYT_RS20880 +1.1 1.2 polyketide cyclase compare
BPHYT_RS24590 +1.1 1.4 DeoR faimly transcriptional regulator compare
BPHYT_RS11170 +1.1 1.4 hypothetical protein compare
BPHYT_RS18780 +1.1 4.5 flagellar motor switch protein FliG compare
BPHYT_RS17490 +1.1 2.4 haloacid dehalogenase compare
BPHYT_RS18935 +1.1 5.3 flagellar biosynthesis regulator FlhF compare
BPHYT_RS04035 +1.1 3.8 transferase compare
BPHYT_RS03980 +1.1 5.0 mannose-1-phosphate guanyltransferase compare
BPHYT_RS05895 +1.1 1.9 hypothetical protein compare
BPHYT_RS00380 +1.1 2.0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS23445 +1.1 2.0 hexuronate transporter compare
BPHYT_RS35275 +1.1 1.0 acetyltransferase compare
BPHYT_RS03015 +1.0 1.1 aldolase compare
BPHYT_RS18795 +1.0 6.1 flagellar export protein FliJ compare
BPHYT_RS07425 +1.0 1.6 hypothetical protein compare
BPHYT_RS18825 +1.0 5.0 flagellar biosynthesis protein FliP compare
BPHYT_RS14655 +1.0 6.2 Fis family transcriptional regulator compare
BPHYT_RS27785 +1.0 1.9 hypothetical protein compare
BPHYT_RS35230 +1.0 1.8 type 11 methyltransferase compare
BPHYT_RS26955 +1.0 1.0 succinylglutamate desuccinylase compare
BPHYT_RS01965 +1.0 1.7 tRNA-Ala compare
BPHYT_RS10440 +1.0 2.9 GntR family transcriptional regulator compare
BPHYT_RS18945 +1.0 6.7 flagellar biosynthesis protein FlhB compare
BPHYT_RS15760 +1.0 3.6 nickel transporter compare
BPHYT_RS10395 +1.0 1.8 sulfonate ABC transporter compare
BPHYT_RS09850 +1.0 1.7 molybdopterin oxidoreductase compare
BPHYT_RS33050 +1.0 2.1 LuxR family transcriptional regulator compare
BPHYT_RS28930 +1.0 1.1 chromosome partitioning protein ParA compare
BPHYT_RS14550 +1.0 1.2 tRNA-Asn compare
BPHYT_RS18940 +1.0 6.4 flagellar biosynthesis protein FlhA compare
BPHYT_RS18900 +1.0 7.7 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS16065 +1.0 0.8 LacI family transcriptional regulator compare
BPHYT_RS14095 +1.0 1.5 phosphohistidine phosphatase compare
BPHYT_RS19325 +0.9 2.1 glycine cleavage system H protein compare
BPHYT_RS21805 +0.9 2.0 transcriptional regulator compare
BPHYT_RS09315 +0.9 1.1 chemotaxis protein CheY compare
BPHYT_RS07080 +0.9 2.1 glutathione S-transferase compare
BPHYT_RS17240 +0.9 1.2 cell division protein FtsW compare
BPHYT_RS33150 +0.9 1.0 beta-lactamase compare
BPHYT_RS31525 +0.9 2.0 hypothetical protein compare
BPHYT_RS20775 +0.9 1.4 3-ketoacyl-ACP reductase compare
BPHYT_RS29855 +0.9 1.0 protein-tyrosine-phosphatase compare
BPHYT_RS05730 +0.9 2.2 hypothetical protein compare
BPHYT_RS36245 +0.9 2.0 hypothetical protein compare
BPHYT_RS32605 +0.9 2.3 hypothetical protein compare
BPHYT_RS04040 +0.9 3.1 hypothetical protein compare
BPHYT_RS34765 +0.9 1.9 chemotaxis protein compare
BPHYT_RS06020 +0.9 3.6 hypothetical protein compare
BPHYT_RS35590 +0.9 2.6 tryptophanyl-tRNA synthetase compare
BPHYT_RS04055 +0.9 5.5 PST family polysaccharide export protein compare
BPHYT_RS36340 +0.9 1.4 hypothetical protein compare
BPHYT_RS18790 +0.9 4.7 ATP synthase compare
BPHYT_RS08190 +0.9 1.1 type II secretion system protein compare
BPHYT_RS11005 +0.9 1.9 chromate transporter compare
BPHYT_RS04050 +0.9 4.2 group 1 glycosyl transferase compare
BPHYT_RS18895 +0.9 3.4 flagellar basal body rod protein FlgB compare
BPHYT_RS33675 +0.9 5.7 esterase compare
BPHYT_RS31130 +0.9 2.1 hypothetical protein compare
BPHYT_RS22045 +0.9 2.9 peptide ABC transporter permease compare
BPHYT_RS10470 +0.9 1.5 hypothetical protein compare
BPHYT_RS06990 +0.9 1.1 membrane protein compare
BPHYT_RS35575 +0.9 1.8 transcriptional regulator compare
BPHYT_RS23730 +0.9 3.2 multidrug DMT transporter permease compare
BPHYT_RS34565 +0.9 1.6 chemotaxis protein compare
BPHYT_RS03990 +0.9 2.4 sugar ABC transporter substrate-binding protein compare
BPHYT_RS30040 +0.9 1.2 hypothetical protein compare
BPHYT_RS30365 +0.8 0.8 beta-lactamase compare
BPHYT_RS07570 +0.8 1.0 hypothetical protein compare
BPHYT_RS23600 +0.8 1.7 hypothetical protein compare
BPHYT_RS22470 +0.8 1.1 hydrolase compare
BPHYT_RS26570 +0.8 0.9 5'-nucleotidase compare
BPHYT_RS08595 +0.8 1.4 multidrug transporter compare
BPHYT_RS00860 +0.8 2.2 3-ketoacyl-ACP reductase compare
BPHYT_RS25075 +0.8 1.1 AraC family transcriptional regulator compare
BPHYT_RS11640 +0.8 1.2 hypothetical protein compare
BPHYT_RS27250 +0.8 1.6 NAD-dependent epimerase/dehydratase compare
BPHYT_RS31760 +0.8 1.9 aryldialkylphosphatase compare
BPHYT_RS35585 +0.8 2.5 hypothetical protein compare
BPHYT_RS18775 +0.8 5.2 flagellar M-ring protein FliF compare
BPHYT_RS30610 +0.8 1.2 major facilitator transporter compare
BPHYT_RS18890 +0.8 4.7 flagellar basal body rod protein FlgC compare
BPHYT_RS27505 +0.8 2.4 hypothetical protein compare
BPHYT_RS23930 +0.8 2.4 triphosphoribosyl-dephospho-CoA synthase compare
BPHYT_RS28000 +0.8 1.4 permease compare
BPHYT_RS05905 +0.8 1.1 hypothetical protein compare
BPHYT_RS28280 +0.8 1.7 hypothetical protein compare
BPHYT_RS29250 +0.8 1.3 dihydrodipicolinate synthase compare
BPHYT_RS04000 +0.8 2.8 GDP-mannose 4,6-dehydratase compare
BPHYT_RS34800 +0.8 1.6 thioesterase compare
BPHYT_RS23990 +0.8 1.1 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS20430 +0.8 1.5 3-dehydroquinate dehydratase compare
BPHYT_RS33400 +0.8 2.3 magnesium transporter CorA compare
BPHYT_RS29410 +0.8 2.0 HPr kinase compare
BPHYT_RS36240 +0.8 3.0 hypothetical protein compare
BPHYT_RS36140 +0.8 2.0 hypothetical protein compare
BPHYT_RS27545 +0.8 1.7 histidine kinase compare
BPHYT_RS24010 +0.8 1.4 L-histidine ABC transporter, permease component 2 (from data) compare
BPHYT_RS18800 +0.8 4.0 flagellar hook-length control protein compare
BPHYT_RS33850 +0.8 1.0 sporulation protein compare
BPHYT_RS30760 +0.8 1.9 MmgE/PrpD family protein compare
BPHYT_RS23480 +0.8 2.3 hypothetical protein compare
BPHYT_RS32110 +0.8 2.1 transcriptional regulator compare
BPHYT_RS18925 +0.8 4.7 RNA polymerase sigma70 compare
BPHYT_RS29060 +0.8 3.1 hypothetical protein compare
BPHYT_RS02540 +0.8 1.1 hypothetical protein compare
BPHYT_RS07220 +0.8 0.9 GCN5 family acetyltransferase compare
BPHYT_RS10500 +0.8 1.2 acetolactate synthase compare
BPHYT_RS20425 +0.8 1.4 hypothetical protein compare
BPHYT_RS02880 +0.8 1.2 ATP-dependent protease compare
BPHYT_RS18810 +0.8 4.0 flagellar motor switch protein FliM compare
BPHYT_RS13555 +0.7 1.1 acyl-CoA dehydrogenase compare
BPHYT_RS14340 +0.7 4.8 Fis family transcriptional regulator compare
BPHYT_RS28345 +0.7 2.9 CDP-diacylglycerol diphosphatase compare
BPHYT_RS07920 +0.7 1.4 hypothetical protein compare
BPHYT_RS01120 +0.7 1.3 plasmid partitioning protein ParB compare
BPHYT_RS11900 +0.7 1.9 LysR family transcriptional regulator compare
BPHYT_RS20845 +0.7 0.8 peroxidase compare
BPHYT_RS33360 +0.7 1.1 formyl-CoA transferase compare
BPHYT_RS23475 +0.7 1.2 luciferase compare
BPHYT_RS25320 +0.7 2.7 cobalamin biosynthesis protein CobW compare
BPHYT_RS35545 +0.7 2.8 cobalt-containing nitrile hydratase subunit alpha compare
BPHYT_RS08600 +0.7 1.2 hypothetical protein compare
BPHYT_RS21565 +0.7 1.6 lysine transporter LysE compare
BPHYT_RS04140 +0.7 2.5 polysaccharide biosynthesis protein compare
BPHYT_RS17265 +0.7 0.9 cell division protein compare
BPHYT_RS20115 +0.7 1.5 transcriptional regulator compare
BPHYT_RS03405 +0.7 1.8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BPHYT_RS20900 +0.7 1.6 phytanoyl-CoA dioxygenase compare
BPHYT_RS17525 +0.7 1.7 glutaredoxin compare
BPHYT_RS30945 +0.7 2.1 LacI family transcriptional regulator compare
BPHYT_RS25135 +0.7 1.5 hypothetical protein compare
BPHYT_RS33215 +0.7 2.4 glycosyltransferase compare
BPHYT_RS03975 +0.7 3.3 AraC family transcriptional regulator compare
BPHYT_RS18525 +0.7 2.0 hypothetical protein compare
BPHYT_RS11495 +0.7 1.9 membrane protein compare
BPHYT_RS03965 +0.7 2.5 GDP-mannose mannosyl hydrolase compare
BPHYT_RS13655 +0.7 5.2 GTP pyrophosphokinase compare
BPHYT_RS29815 +0.7 1.9 UDP-N-acetyl-D-mannosamine transferase compare
BPHYT_RS10560 +0.7 2.6 hypothetical protein compare
BPHYT_RS20835 +0.7 1.9 pyridoxal 4-dehydrogenase compare
BPHYT_RS10480 +0.7 2.7 LPS biosynthesis protein compare
BPHYT_RS06385 +0.7 1.9 ribosomal RNA large subunit methyltransferase H compare
BPHYT_RS05800 +0.7 2.6 hypothetical protein compare
BPHYT_RS02235 +0.7 1.5 beta carbonic anhydrase compare
BPHYT_RS30890 +0.7 1.0 hypothetical protein compare
BPHYT_RS34635 +0.7 2.8 50S ribosomal protein L21 compare
BPHYT_RS28605 +0.7 1.2 NADPH-dependent FMN reductase compare
BPHYT_RS24925 +0.7 1.0 cytochrome O ubiquinol oxidase compare
BPHYT_RS19930 +0.7 1.4 transcriptional regulator compare
BPHYT_RS18880 +0.7 4.3 flagellar hook protein FlgE compare
BPHYT_RS29515 +0.7 2.5 spermidine/putrescine ABC transporter substrate-binding protein compare
BPHYT_RS24045 +0.7 1.3 amino acid ABC transporter compare
BPHYT_RS26890 +0.7 2.1 LysR family transcriptional regulator compare
BPHYT_RS25605 +0.7 2.7 symporter compare
BPHYT_RS14755 +0.7 1.6 tRNA (guanine-N(1)-)-methyltransferase compare
BPHYT_RS05880 +0.7 1.4 hypothetical protein compare
BPHYT_RS11245 +0.7 1.9 ATPase compare
BPHYT_RS09910 +0.7 1.7 tyramine oxidase compare
BPHYT_RS18265 +0.7 2.2 phenylacetate-CoA oxygenase subunit PaaJ compare
BPHYT_RS05970 +0.7 2.9 glyoxalase compare
BPHYT_RS27030 +0.7 1.1 transcriptional regulator compare
BPHYT_RS25810 +0.7 1.9 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
BPHYT_RS03265 +0.7 2.2 hypothetical protein compare
BPHYT_RS10540 +0.7 1.1 secretion protein compare
BPHYT_RS09280 +0.7 0.7 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS33795 +0.7 2.4 4-alpha-glucanotransferase compare
BPHYT_RS22235 +0.6 3.0 sensor histidine kinase compare
BPHYT_RS25410 +0.6 2.1 porin compare
BPHYT_RS20150 +0.6 1.1 glycosyl transferase family 1 compare
BPHYT_RS05395 +0.6 0.9 hypothetical protein compare
BPHYT_RS05300 +0.6 1.5 polyketide cyclase compare
BPHYT_RS31515 +0.6 1.3 agmatinase compare
BPHYT_RS34620 +0.6 0.9 hypothetical protein compare
BPHYT_RS11665 +0.6 1.6 ribonuclease compare
BPHYT_RS21495 +0.6 0.7 ABC transporter compare
BPHYT_RS26825 +0.6 1.9 quercetin 2,3-dioxygenase compare
BPHYT_RS19770 +0.6 1.4 ArsR family transcriptional regulator compare
BPHYT_RS21215 +0.6 2.3 Crp/Fnr family transcriptional regulator compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Fucose in Burkholderia phytofirmans PsJN

For carbon source L-Fucose across organisms