Experiment set2IT070 for Sinorhizobium meliloti 1021

Compare to:

LB, 30C

200 most important genes:

  gene name fitness t score description  
SMc02363 -3.6 -4.9 cytochrome C-type biogenesis transmembrane protein compare
SMc03849 -3.3 -2.9 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02140 -3.2 -3.7 phosphate regulon transcriptional regulatory protein compare
SMc00619 -2.9 -3.3 hypothetical protein compare
SMc00295 -2.8 -2.0 hypothetical protein compare
SMc02909 -2.8 -3.8 transglycosylase transmembrane protein compare
SMc02147 -2.8 -9.4 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00492 -2.8 -1.7 hypothetical protein compare
SMc02115 -2.5 -1.6 hypothetical protein compare
SMc01147 -2.5 -5.9 coproporphyrinogen III oxidase compare
SMc03967 -2.3 -1.9 Holliday junction resolvase compare
SMc02144 -2.3 -6.7 phosphate ABC transporter permease compare
SMc01845 -2.3 -3.6 transglycosylase transmembrane protein compare
SMc02149 -2.2 -3.0 hypothetical protein compare
SMc02850 -2.2 -4.8 DNA polymerase I compare
SMc03763 -2.2 -4.7 cytosine-specific methyltransferase compare
SMc04296 -2.1 -1.8 cell division protein FtsZ compare
SMc02867 -1.9 -3.8 multidrug-efflux system transmembrane protein compare
SMc02435 -1.8 -3.3 methyltransferase compare
SMc03850 -1.8 -1.3 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20307 -1.8 -1.4 dihydroxyacetone kinase compare
SMc00914 -1.8 -4.8 oxidoreductase compare
SMc02142 -1.7 -7.5 phosphate transporter ATP-binding protein compare
SMc02234 -1.7 -4.2 hypothetical protein compare
SMc02362 -1.7 -3.9 cytochrome c-type biogenesis protein CcmE compare
SMc00963 -1.7 -4.9 hypothetical protein compare
SMc02102 -1.7 -5.2 hypothetical protein compare
SMc02856 -1.6 -8.5 penicillin-binding protein compare
SMc00334 -1.6 -1.9 cytidylate kinase compare
SMc02141 -1.6 -3.6 phosphate transporter PhoU compare
SMc01569 -1.6 -2.6 carbamoyl phosphate synthase small subunit compare
SMc00580 -1.5 -4.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc03124 -1.5 -4.0 periplasmic binding ABC transporter protein compare
SMc01215 -1.5 -4.4 carbamoyl phosphate synthase large subunit compare
SMc02683 -1.5 -2.4 hypothetical protein compare
SMc00987 -1.5 -3.7 hypothetical protein compare
SMc01183 -1.5 -2.3 LexA repressor compare
SMc02906 -1.5 -1.3 hypothetical protein compare
SMc02232 -1.5 -3.6 hypothetical protein compare
SMc02143 -1.4 -3.2 phosphate ABC transporter permease compare
SMc02451 -1.4 -1.9 hypothetical protein compare
SMc04085 -1.4 -4.4 hypothetical protein compare
SMc02145 -1.4 -0.8 signal peptide protein compare
SMc00579 -1.3 -6.8 dimethyladenosine transferase compare
SMc00302 -1.3 -3.6 hypothetical protein compare
SMc01361 -1.3 -5.0 dihydroorotase compare
SMc02077 -1.3 -3.2 exodeoxyribonuclease III protein compare
SMc00073 -1.3 -2.4 hypothetical protein compare
SMc03127 -1.3 -2.1 ABC transporter permease compare
SMa0789 -1.3 -4.3 GntR family transcriptional regulator compare
SMc00712 -1.3 -1.7 hypothetical protein compare
SMc03128 -1.3 -3.2 ABC transporter permease compare
SMc00450 -1.3 -3.1 protoheme IX farnesyltransferase compare
SMc01800 -1.3 -2.0 cytochrome C oxidase assembly transmembrane protein compare
SMc02505 -1.2 -2.1 hypothetical protein compare
SMc01568 -1.2 -1.9 hypothetical protein compare
SMc02576 -1.2 -1.8 acetyltransferase compare
SMc02753 -1.2 -1.7 PTS system transporter subunit IIA compare
SMc00928 -1.2 -1.1 signal peptide protein compare
SMc02071 -1.1 -3.7 hydrolase glycosidase compare
SMc02833 -1.1 -1.6 penicillin-insensitive murein endopeptidase compare
SMc00856 -1.1 -1.5 hypothetical protein compare
SMc02114 -1.1 -3.9 hypothetical protein compare
SMc02495 -1.1 -1.8 translaldolase compare
SMc01461 -1.1 -4.2 DNA helicase II protein compare
SMc03899 -1.1 -1.0 hypothetical protein compare
SMc02894 -1.1 -1.9 hypothetical protein compare
SMc03774 -1.0 -2.5 hypothetical protein compare
SMc00053 -1.0 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc03978 -1.0 -2.3 transketolase compare
SM_b21679 -1.0 -1.1 hypothetical protein compare
SMc01208 -1.0 -2.5 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00557 -1.0 -4.9 alanine racemase compare
SMa0674 -1.0 -1.4 hypothetical protein compare
SMc01877 -1.0 -4.3 DNA repair protein compare
SMc01880 -1.0 -2.5 pantoate--beta-alanine ligase compare
SMc02778 -1.0 -1.2 hydroxyacid aldolase compare
SMc02484 -1.0 -4.5 amino acid efflux transmembrane protein compare
SMc01438 -1.0 -2.6 protease precursor signal peptide protein compare
SMc00010 -0.9 -1.8 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc01360 -0.9 -2.6 aspartate carbamoyltransferase catalytic subunit compare
SMc00605 -0.9 -2.4 hypothetical protein compare
SMc00760 -0.9 -3.7 recombinase A compare
SMc00353 -0.9 -2.5 transmembrane protein compare
SMc00565 -0.9 -1.5 50S ribosomal protein L9 compare
SMc01853 -0.9 -3.0 hypothetical protein compare
SMa0882 -0.9 -1.2 hypothetical protein compare
SMc00556 -0.9 -3.9 DNA repair protein RadA compare
SMa1118 -0.9 -1.2 HspC2 heat shock protein compare
SMc02844 -0.9 -0.8 transcriptional regulator compare
SMc02425 -0.9 -3.1 transcriptional regulator compare
SMc03140 -0.9 -4.0 transcriptional regulator compare
SMc01235 -0.9 -6.1 excinuclease ABC subunit A compare
SMc00602 -0.8 -3.5 excinuclease ABC subunit C compare
SMc02724 -0.8 -3.0 hypothetical protein compare
SM_b20042 -0.8 -2.8 hypothetical protein compare
SMc00496 -0.8 -1.2 hypothetical protein compare
SMc01850 -0.8 -2.2 hypothetical protein compare
SMc03878 -0.8 -1.8 acetoacetyl-CoA reductase compare
SMc02897 -0.8 -3.1 cytochrome C transmembrane protein compare
SMc01607 -0.8 -4.3 permease compare
SMc04385 -0.8 -2.7 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00815 -0.8 -1.0 inosine 5'-monophosphate dehydrogenase compare
SMc01280 -0.8 -1.9 protease compare
SMc02866 -0.8 -3.1 transcriptional regulator compare
SM_b21213 -0.8 -3.5 serinethreonine protein phosphatase compare
SMc01206 -0.8 -1.7 queuine tRNA-ribosyltransferase compare
SMc02685 -0.8 -2.7 hypothetical protein compare
SMc02306 -0.8 -1.3 hypothetical protein compare
SMc00378 -0.8 -2.3 exodeoxyribonuclease VII large subunit compare
SMc00451 -0.8 -3.7 processing protease compare
SMc00147 -0.7 -2.1 hypothetical protein compare
SMc02868 -0.7 -3.8 multidrug efflux system protein compare
SMc02641 -0.7 -2.9 UDP-glucose 6-dehydrogenase compare
SM_b22001 -0.7 -1.4 hypothetical protein compare
SM_b20897 -0.7 -1.6 hypothetical protein compare
SMc00569 -0.7 -0.9 hypothetical protein compare
SMa1361 -0.7 -2.2 hypothetical protein compare
SMc03179 -0.7 -5.4 monovalent cation/H+ antiporter subunit A compare
SMc01700 -0.7 -3.9 peptidyl-prolyl cis-trans isomerase A compare
SMc00555 -0.7 -1.0 colicin V production transmembrane protein compare
SMc01471 -0.7 -2.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMc03100 -0.7 -1.5 hypothetical protein compare
SMc04404 -0.7 -1.2 amino acid efflux transmembrane protein compare
SMc04169 -0.7 -5.5 transcriptional regulator compare
SMc03180 -0.7 -4.2 monovalent cation/H+ antiporter subunit C compare
SMc01241 -0.7 -1.6 hypothetical protein compare
SMc03182 -0.7 -3.0 pH adaptation potassium efflux system E transmembrane protein compare
SMc00355 -0.7 -2.1 hypothetical protein compare
SMa0734 -0.7 -1.3 hypothetical protein compare
SMc03242 -0.7 -2.2 GTP-binding protein compare
SMc03236 -0.7 -2.2 glutamine amidotransferase compare
SMc01342 -0.7 -3.1 hypothetical protein compare
SM_b21591 -0.7 -1.6 GntR family transcriptional regulator compare
SM_b22005 -0.7 -1.2 hypothetical protein compare
SMc02543 -0.7 -3.1 hypothetical protein compare
SM_b20258 -0.7 -2.3 transcriptional regulator compare
SMc01881 -0.7 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMa1968 -0.6 -3.0 amidotransferase compare
SMa1239 -0.6 -0.9 NapD component of periplasmic nitrate reductase compare
SMc00427 -0.6 -1.7 peptide chain release factor RF-3 protein compare
SMc02172 -0.6 -3.7 transcriptional regulator compare
SMc03993 -0.6 -3.6 hypothetical protein compare
SMc01969 -0.6 -3.4 hypothetical protein compare
SMc03773 -0.6 -4.1 hypothetical protein compare
SMc01606 -0.6 -3.5 permease compare
SMa0728 -0.6 -2.4 hypothetical protein compare
SMc00088 -0.6 -1.5 hypothetical protein compare
SMc01012 -0.6 -1.3 hypothetical protein compare
SMc03834 -0.6 -1.1 pterin-4-alpha-carbinolamine dehydratase compare
SM_b20948 -0.6 -1.1 glucosyltransferase compare
SMc02510 -0.6 -0.6 ferric uptake regulation protein compare
SMc05020 -0.6 -1.3 entericidin A precursor compare
SMc01259 -0.6 -1.8 hypothetical protein compare
SMc00859 -0.6 -1.2 hypothetical protein compare
SMc02309 -0.6 -3.0 arsenate reductase compare
SMc00003 -0.6 -1.5 chaperone protein compare
SMc02280 -0.6 -1.0 hypothetical protein compare
SMc00726 -0.6 -0.5 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00184 -0.6 -2.5 tRNA/rRNA methyltransferase compare
SM_b20880 -0.6 -4.0 ATP-dependent RNA helicase compare
SM_b21174 -0.6 -2.2 phosphate uptake ABC transporter permease compare
SMc00356 -0.6 -2.9 lysyl-tRNA synthetase compare
SMc00948 -0.6 -3.6 glutamine synthetase compare
SMa0738 -0.6 -2.8 CspA6 cold shock protein transcriptional regulator compare
SMc04231 -0.6 -3.4 excinuclease ABC subunit B compare
SMc02698 -0.6 -2.1 adenine phosphoribosyltransferase compare
SMc00982 -0.6 -2.8 dioxygenase compare
SMc03876 -0.6 -2.2 HEAT shock-like protein compare
SMc00296 -0.6 -3.5 POLY3-hydroxybutyrate polymerase compare
SMc03229 -0.6 -1.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01968 -0.6 -3.3 transcriptional regulator compare
SMc04393 -0.6 -2.9 ABC transporter ATP-binding protein compare
SMc02656 -0.6 -1.9 hypothetical protein compare
SMc03184 -0.6 -1.0 PH adaptation potassium efflux system G transmembrane protein compare
SMc03181 -0.6 -3.1 monovalent cation/H+ antiporter subunit D compare
SM_b20542 -0.6 -1.3 protein in ISRm14 compare
SMc00461 -0.6 -0.8 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc00876 -0.6 -2.3 ATP-binding MRP protein compare
SMa1635 -0.6 -1.1 hypothetical protein compare
SM_b20876 -0.6 -2.4 hypothetical protein compare
SMc01007 -0.5 -1.2 hypothetical protein compare
SMa1442 -0.5 -2.8 GntR family transcriptional regulator compare
SMc03785 -0.5 -2.3 dinucleoside polyphosphate hydrolase compare
SMa0121 -0.5 -1.7 hypothetical protein compare
SM_b21175 -0.5 -1.6 phosphate uptake ABC transporter permease compare
SMc01545 -0.5 -3.0 hypothetical protein compare
SMc00337 -0.5 -0.5 hypothetical protein compare
SM_b20889 -0.5 -2.3 hypothetical protein compare
SMc03826 -0.5 -1.6 argininosuccinate synthase compare
SM_b20822 -0.5 -3.1 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SM_b20146 -0.5 -2.4 pyridoxal phosphate biosynthetic protein compare
SM_b21471 -0.5 -2.3 hypothetical protein compare
SMc01119 -0.5 -1.2 hypothetical protein compare
SMc04051 -0.5 -1.2 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc03746 -0.5 -1.1 hypothetical protein compare
SM_b20600 -0.5 -1.7 hypothetical protein compare
SMc01605 -0.5 -2.4 periplasmic binding ABC transporter protein compare
SMc01204 -0.5 -3.0 transmembrane oxidoreductase compare
SMc03183 -0.5 -1.8 monovalent cation/H+ antiporter subunit F compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in temperature experiments