Experiment set2IT069 for Sinorhizobium meliloti 1021

Compare to:

LB, 30C

200 most important genes:

  gene name fitness t score description  
SMc02909 -3.7 -3.4 transglycosylase transmembrane protein compare
SMc02363 -3.3 -4.4 cytochrome C-type biogenesis transmembrane protein compare
SMc02753 -3.1 -2.4 PTS system transporter subunit IIA compare
SMc02147 -2.8 -9.2 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02850 -2.7 -3.4 DNA polymerase I compare
SMc02102 -2.7 -6.6 hypothetical protein compare
SMc00619 -2.5 -2.1 hypothetical protein compare
SMc03229 -2.4 -2.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02833 -2.4 -3.9 penicillin-insensitive murein endopeptidase compare
SMc00928 -2.4 -2.6 signal peptide protein compare
SMc03763 -2.4 -4.4 cytosine-specific methyltransferase compare
SMc03849 -2.3 -2.2 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc01147 -2.2 -5.1 coproporphyrinogen III oxidase compare
SMc00334 -2.1 -3.2 cytidylate kinase compare
SMc03242 -2.0 -3.3 GTP-binding protein compare
SMc00914 -1.9 -5.7 oxidoreductase compare
SMc02505 -1.9 -2.7 hypothetical protein compare
SMc00987 -1.9 -3.9 hypothetical protein compare
SMc02140 -1.9 -2.9 phosphate regulon transcriptional regulatory protein compare
SMc02495 -1.8 -2.2 translaldolase compare
SMc02144 -1.8 -5.7 phosphate ABC transporter permease compare
SMc00580 -1.8 -4.5 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02435 -1.8 -3.9 methyltransferase compare
SMc00815 -1.7 -1.7 inosine 5'-monophosphate dehydrogenase compare
SMc03850 -1.7 -2.0 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02142 -1.7 -3.8 phosphate transporter ATP-binding protein compare
SMc02362 -1.7 -2.5 cytochrome c-type biogenesis protein CcmE compare
SMc02856 -1.6 -9.4 penicillin-binding protein compare
SMc01568 -1.6 -2.0 hypothetical protein compare
SMc00053 -1.6 -1.5 monovalent cation/H+ antiporter subunit C compare
SMc02641 -1.6 -5.1 UDP-glucose 6-dehydrogenase compare
SMc00353 -1.6 -3.4 transmembrane protein compare
SMc01215 -1.5 -5.1 carbamoyl phosphate synthase large subunit compare
SMc02141 -1.5 -3.2 phosphate transporter PhoU compare
SMc02143 -1.5 -3.0 phosphate ABC transporter permease compare
SMc01361 -1.5 -5.1 dihydroorotase compare
SMc00726 -1.5 -1.0 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00450 -1.5 -3.4 protoheme IX farnesyltransferase compare
SMc00963 -1.5 -3.9 hypothetical protein compare
SMc00492 -1.5 -1.3 hypothetical protein compare
SMc01569 -1.5 -2.5 carbamoyl phosphate synthase small subunit compare
SMc01438 -1.5 -4.7 protease precursor signal peptide protein compare
SMc02149 -1.4 -1.9 hypothetical protein compare
SMc04296 -1.4 -0.8 cell division protein FtsZ compare
SMc01845 -1.4 -3.0 transglycosylase transmembrane protein compare
SMa0144 -1.4 -1.3 hypothetical protein compare
SMc01206 -1.4 -2.9 queuine tRNA-ribosyltransferase compare
SMc00295 -1.4 -1.7 hypothetical protein compare
SMc01850 -1.3 -3.9 hypothetical protein compare
SMc03127 -1.3 -1.8 ABC transporter permease compare
SMc01280 -1.3 -2.2 protease compare
SMc04085 -1.3 -3.9 hypothetical protein compare
SMa1118 -1.3 -1.7 HspC2 heat shock protein compare
SM_b20758 -1.3 -2.9 ArsR family transcriptional regulator compare
SMc02510 -1.3 -1.1 ferric uptake regulation protein compare
SMc02867 -1.2 -3.1 multidrug-efflux system transmembrane protein compare
SMc01183 -1.2 -1.6 LexA repressor compare
SMc01877 -1.2 -7.3 DNA repair protein compare
SMc02897 -1.2 -4.2 cytochrome C transmembrane protein compare
SMc00302 -1.2 -3.6 hypothetical protein compare
SMc00427 -1.2 -2.8 peptide chain release factor RF-3 protein compare
SMc00451 -1.2 -5.8 processing protease compare
SMc01880 -1.2 -3.2 pantoate--beta-alanine ligase compare
SMa0789 -1.1 -3.5 GntR family transcriptional regulator compare
SMc02232 -1.1 -3.6 hypothetical protein compare
SMc02685 -1.1 -3.4 hypothetical protein compare
SMc00088 -1.1 -1.2 hypothetical protein compare
SMc00073 -1.1 -2.4 hypothetical protein compare
SMc02234 -1.1 -2.1 hypothetical protein compare
SMc03978 -1.1 -2.6 transketolase compare
SMc01881 -1.1 -3.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02077 -1.1 -2.1 exodeoxyribonuclease III protein compare
SMc00352 -1.1 -1.2 acetyltransferase compare
SMc00555 -1.1 -1.4 colicin V production transmembrane protein compare
SMc02484 -1.1 -5.9 amino acid efflux transmembrane protein compare
SMc01606 -1.1 -6.1 permease compare
SMc01800 -1.0 -1.8 cytochrome C oxidase assembly transmembrane protein compare
SMc02451 -1.0 -2.1 hypothetical protein compare
SMc00712 -1.0 -1.9 hypothetical protein compare
SMa0341 -1.0 -2.3 hypothetical protein compare
SM_b20387 -1.0 -1.1 transcriptional regulator compare
SMc00602 -1.0 -4.3 excinuclease ABC subunit C compare
SMc01012 -1.0 -1.8 hypothetical protein compare
SMc02114 -1.0 -3.9 hypothetical protein compare
SMc03140 -1.0 -3.7 transcriptional regulator compare
SMc00802 -1.0 -0.9 hypothetical protein compare
SMc02115 -0.9 -0.9 hypothetical protein compare
SMa1368 -0.9 -2.8 hypothetical protein compare
SMc00579 -0.9 -2.9 dimethyladenosine transferase compare
SM_b22001 -0.9 -1.3 hypothetical protein compare
SMc03967 -0.9 -1.5 Holliday junction resolvase compare
SMc01187 -0.9 -2.2 rare lipoprotein A compare
SMc01853 -0.9 -2.7 hypothetical protein compare
SMc01242 -0.9 -2.5 signal peptide protein compare
SM_b21479 -0.9 -1.8 hypothetical protein compare
SMc03183 -0.9 -3.6 monovalent cation/H+ antiporter subunit F compare
SMc03181 -0.9 -5.6 monovalent cation/H+ antiporter subunit D compare
SMc03180 -0.8 -5.0 monovalent cation/H+ antiporter subunit C compare
SMc02868 -0.8 -3.0 multidrug efflux system protein compare
SM_b20258 -0.8 -2.1 transcriptional regulator compare
SM_b20323 -0.8 -0.9 transcriptional regulator compare
SMc00557 -0.8 -4.5 alanine racemase compare
SMc02543 -0.8 -3.9 hypothetical protein compare
SMc00425 -0.8 -2.7 transcriptional regulator compare
SMc00565 -0.8 -1.4 50S ribosomal protein L9 compare
SMc01461 -0.8 -2.7 DNA helicase II protein compare
SM_b21679 -0.8 -0.9 hypothetical protein compare
SMc00378 -0.8 -1.7 exodeoxyribonuclease VII large subunit compare
SMc00760 -0.8 -3.5 recombinase A compare
SMc01207 -0.8 -1.8 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02858 -0.8 -0.7 chaperone protein DnaJ compare
SMc02787 -0.8 -2.0 hypothetical protein compare
SMc04330 -0.8 -1.9 trimethylamine methyltransferase compare
SMc03124 -0.8 -3.0 periplasmic binding ABC transporter protein compare
SMc04024 -0.8 -3.7 membrane-bound lytic murein transglycosylase compare
SMa1323 -0.8 -2.0 Transcription regulator compare
SM_b20811 -0.8 -1.7 hypothetical protein compare
SMc01581 -0.7 -3.5 hypothetical protein compare
SMc00667 -0.7 -1.5 hypothetical protein compare
SM_b20450 -0.7 -5.4 regulatory protein compare
SM_b20953 -0.7 -0.8 hypothetical protein compare
SMc02862 -0.7 -3.1 Pit accessory protein compare
SMc03182 -0.7 -3.0 pH adaptation potassium efflux system E transmembrane protein compare
SMc01457 -0.7 -4.8 transport transmembrane protein compare
SMa0838 -0.7 -2.4 SyrA protein involved in EPS production compare
SMc03773 -0.7 -3.4 hypothetical protein compare
SMc00970 -0.7 -2.3 exodeoxyribonuclease VII small subunit compare
SMc03100 -0.7 -1.3 hypothetical protein compare
SMc00514 -0.7 -2.1 monooxygenase compare
SMc01235 -0.7 -5.3 excinuclease ABC subunit A compare
SMc00298 -0.7 -3.0 methionine aminopeptidase compare
SMc03979 -0.7 -2.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMa0211 -0.7 -1.1 hypothetical protein compare
SM_b20509 -0.7 -1.8 transcriptional regulator compare
SMc01607 -0.7 -4.4 permease compare
SMa2389 -0.7 -2.0 OsmC-like protein compare
SMa0349 -0.7 -1.5 hypothetical protein compare
SMc02145 -0.7 -0.8 signal peptide protein compare
SMc01146 -0.7 -1.3 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc01974 -0.7 -1.7 transcriptional regulator compare
SMc04191 -0.7 -3.4 hypothetical protein compare
SMc00691 -0.7 -2.2 site-specific tyrosine recombinase XerD compare
SMa0760 -0.7 -1.1 FixT2 anti-kinase compare
SMc02822 -0.7 -2.9 hypothetical protein compare
SMc00795 -0.7 -1.8 hypothetical protein compare
SMc02861 -0.7 -1.6 phosphate transporter compare
SM_b21213 -0.7 -2.3 serinethreonine protein phosphatase compare
SMc02071 -0.7 -3.0 hydrolase glycosidase compare
SMc00147 -0.7 -2.4 hypothetical protein compare
SMc04266 -0.7 -2.6 hypothetical protein compare
SMc03184 -0.7 -0.9 PH adaptation potassium efflux system G transmembrane protein compare
SM_b21347 -0.7 -1.4 pectin degradation protein compare
SMc00187 -0.6 -1.5 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMa1625 -0.6 -2.1 LysR family transcriptional regulator compare
SMc03993 -0.6 -2.4 hypothetical protein compare
SMc02121 -0.6 -0.7 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc04121 -0.6 -1.6 uracil phosphoribosyltransferase compare
SM_b20880 -0.6 -3.7 ATP-dependent RNA helicase compare
SMc02069 -0.6 -2.1 hypothetical protein compare
SMc02582 -0.6 -1.8 hypothetical protein compare
SMa1430 -0.6 -2.0 Dehydrogenase, Zn-dependent compare
SMc03785 -0.6 -1.8 dinucleoside polyphosphate hydrolase compare
SMc02246 -0.6 -0.8 hypothetical protein compare
SMa0833 -0.6 -0.9 hypothetical protein compare
SMc01360 -0.6 -1.2 aspartate carbamoyltransferase catalytic subunit compare
SMc04169 -0.6 -5.1 transcriptional regulator compare
SMc04383 -0.6 -2.1 putative hydrolase, required for lysine catabolism (from data) compare
SMc00496 -0.6 -1.0 hypothetical protein compare
SMc00355 -0.6 -2.2 hypothetical protein compare
SMc01337 -0.6 -1.0 hypothetical protein compare
SMc00296 -0.6 -3.8 POLY3-hydroxybutyrate polymerase compare
SMa2215 -0.6 -2.2 GntR family transcriptional regulator compare
SMc01709 -0.6 -2.2 signal peptide protein compare
SMa1643 -0.6 -1.6 hypothetical protein compare
SMc04882 -0.6 -1.6 transcriptional regulator compare
SMc02979 -0.6 -2.8 hypothetical protein compare
SMc01346 -0.6 -1.5 leucyl/phenylalanyl-tRNA--protein transferase compare
SMc01468 -0.6 -0.9 chemotaxis protein compare
SMc04242 -0.6 -1.1 zinc uptake regulation protein compare
SMc02309 -0.6 -2.2 arsenate reductase compare
SMa0121 -0.6 -1.0 hypothetical protein compare
SM_b20822 -0.6 -2.4 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SM_b21175 -0.6 -1.8 phosphate uptake ABC transporter permease compare
SMc04231 -0.6 -3.6 excinuclease ABC subunit B compare
SMc03836 -0.6 -1.1 acyl-CoA thioesterase i protein compare
SM_b20123 -0.6 -1.4 transcriptional regulator compare
SMa0846 -0.6 -0.9 transposase, fragment compare
SMc02425 -0.6 -2.0 transcriptional regulator compare
SM_b20146 -0.6 -2.1 pyridoxal phosphate biosynthetic protein compare
SMc02713 -0.6 -0.8 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc01342 -0.6 -2.8 hypothetical protein compare
SM_b20821 -0.5 -2.4 ATPGTP-binding hydroxymethyltransferase compare
SMc01605 -0.5 -2.6 periplasmic binding ABC transporter protein compare
SMc01969 -0.5 -2.6 hypothetical protein compare
SMc01039 -0.5 -1.8 hypothetical protein compare
SMc02562 -0.5 -3.1 phosphoenolpyruvate carboxykinase compare
SMc01716 -0.5 -3.2 sensor histidine kinase transmembrane protein compare
SMa0093 -0.5 -1.6 Branched-chain amino acid aminotransferase compare
SMc00194 -0.5 -2.3 hypothetical protein compare
SM_b21442 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in temperature experiments