Experiment set2IT068 for Sinorhizobium meliloti 1021

Compare to:

LB, 23C

200 most important genes:

  gene name fitness t score description  
SMc03763 -4.8 -3.3 cytosine-specific methyltransferase compare
SMc00427 -4.5 -4.3 peptide chain release factor RF-3 protein compare
SMc02363 -3.8 -3.7 cytochrome C-type biogenesis transmembrane protein compare
SMc02362 -3.5 -5.2 cytochrome c-type biogenesis protein CcmE compare
SMc03978 -3.4 -5.1 transketolase compare
SMc02246 -3.4 -1.8 hypothetical protein compare
SMc01569 -3.2 -2.7 carbamoyl phosphate synthase small subunit compare
SMc00450 -3.1 -4.2 protoheme IX farnesyltransferase compare
SMc01147 -3.0 -4.9 coproporphyrinogen III oxidase compare
SMc03849 -3.0 -2.7 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMa0789 -3.0 -4.3 GntR family transcriptional regulator compare
SMc00815 -3.0 -3.3 inosine 5'-monophosphate dehydrogenase compare
SMc02145 -3.0 -1.5 signal peptide protein compare
SMc02144 -2.9 -6.4 phosphate ABC transporter permease compare
SMc02115 -2.9 -1.5 hypothetical protein compare
SMc01215 -2.8 -6.1 carbamoyl phosphate synthase large subunit compare
SMc02909 -2.6 -3.4 transglycosylase transmembrane protein compare
SMc02234 -2.6 -3.5 hypothetical protein compare
SMc01880 -2.5 -4.6 pantoate--beta-alanine ligase compare
SMc03850 -2.4 -1.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00073 -2.4 -3.5 hypothetical protein compare
SMc00010 -2.3 -3.1 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02850 -2.2 -4.7 DNA polymerase I compare
SMc00191 -2.2 -2.3 hypothetical protein compare
SMc02753 -1.9 -2.0 PTS system transporter subunit IIA compare
SMc02102 -1.9 -4.8 hypothetical protein compare
SMc00067 -1.8 -9.8 outer-membranne lipoprotein compare
SMc00334 -1.8 -2.3 cytidylate kinase compare
SMc01933 -1.8 -2.2 hypothetical protein compare
SMc01361 -1.8 -5.5 dihydroorotase compare
SMc02495 -1.8 -2.0 translaldolase compare
SMc02232 -1.7 -4.2 hypothetical protein compare
SMc02140 -1.7 -2.9 phosphate regulon transcriptional regulatory protein compare
SMc02867 -1.7 -3.3 multidrug-efflux system transmembrane protein compare
SMc02143 -1.6 -3.8 phosphate ABC transporter permease compare
SMc02142 -1.6 -7.5 phosphate transporter ATP-binding protein compare
SMc02861 -1.6 -2.1 phosphate transporter compare
SMc02510 -1.5 -1.1 ferric uptake regulation protein compare
SMc01939 -1.5 -1.7 urease subunit beta compare
SMc00302 -1.5 -3.0 hypothetical protein compare
SMc04296 -1.4 -1.3 cell division protein FtsZ compare
SMc02260 -1.4 -1.5 ABC transporter ATP-binding protein compare
SMc02141 -1.4 -3.4 phosphate transporter PhoU compare
SMc01881 -1.4 -3.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02451 -1.4 -1.7 hypothetical protein compare
SMc01342 -1.3 -4.5 hypothetical protein compare
SMc02147 -1.3 -5.2 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02484 -1.3 -3.4 amino acid efflux transmembrane protein compare
SMc00963 -1.3 -4.2 hypothetical protein compare
SMc00555 -1.3 -1.5 colicin V production transmembrane protein compare
SMc01845 -1.3 -2.6 transglycosylase transmembrane protein compare
SMc02683 -1.3 -1.6 hypothetical protein compare
SMc01208 -1.3 -2.0 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00580 -1.2 -4.0 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00987 -1.2 -2.6 hypothetical protein compare
SM_b21580 -1.2 -1.7 hypothetical protein compare
SMc00856 -1.2 -1.4 hypothetical protein compare
SMa0748 -1.2 -1.7 MucR family transcriptional regulator compare
SMa0734 -1.2 -1.9 hypothetical protein compare
SMc02897 -1.2 -3.2 cytochrome C transmembrane protein compare
SM_b20293 -1.2 -1.3 hypothetical protein compare
SMc03127 -1.2 -1.4 ABC transporter permease compare
SMc02077 -1.1 -2.0 exodeoxyribonuclease III protein compare
SMc00876 -1.1 -3.9 ATP-binding MRP protein compare
SMc01850 -1.1 -1.8 hypothetical protein compare
SMc00565 -1.1 -1.5 50S ribosomal protein L9 compare
SMc02505 -1.1 -1.7 hypothetical protein compare
SMc01187 -1.1 -2.4 rare lipoprotein A compare
SMc01438 -1.1 -3.4 protease precursor signal peptide protein compare
SMc00492 -1.0 -1.0 hypothetical protein compare
SMc00451 -1.0 -4.2 processing protease compare
SMa1118 -1.0 -1.6 HspC2 heat shock protein compare
SMc02149 -1.0 -1.3 hypothetical protein compare
SMc00823 -1.0 -2.0 hypothetical protein compare
SMc02833 -1.0 -1.6 penicillin-insensitive murein endopeptidase compare
SM_b20452 -1.0 -2.9 hypothetical protein compare
SM_b20690 -1.0 -2.0 hypothetical protein compare
SM_b20758 -1.0 -1.7 ArsR family transcriptional regulator compare
SMc01242 -1.0 -2.7 signal peptide protein compare
SMc04220 -1.0 -1.3 transcriptional regulator compare
SM_b21679 -1.0 -1.0 hypothetical protein compare
SMc01183 -1.0 -1.3 LexA repressor compare
SMc02856 -1.0 -6.0 penicillin-binding protein compare
SMc00914 -0.9 -2.4 oxidoreductase compare
SMc03979 -0.9 -2.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMa0955 -0.9 -1.6 GntR family transcriptional regulator compare
SMc00013 -0.9 -1.8 cytochrome C oxidase subunit III transmembrane protein compare
SMc02361 -0.9 -2.1 cytochrome C-type biogenesis transmembrane protein compare
SMc02866 -0.9 -2.5 transcriptional regulator compare
SMc04216 -0.9 -3.0 hypothetical protein compare
SMc03229 -0.9 -0.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00712 -0.9 -1.0 hypothetical protein compare
SMc04242 -0.9 -1.6 zinc uptake regulation protein compare
SMc03996 -0.9 -4.0 thiamine-phosphate pyrophosphorylase compare
SMc01235 -0.9 -6.3 excinuclease ABC subunit A compare
SMc04090 -0.9 -2.7 sun protein compare
SMc00941 -0.9 -1.2 hypothetical protein compare
SMc02697 -0.9 -1.5 hypothetical protein compare
SMc00602 -0.9 -3.3 excinuclease ABC subunit C compare
SMc01608 -0.9 -2.8 ABC transporter ATP-binding protein compare
SMc04085 -0.8 -2.6 hypothetical protein compare
SMc01501 -0.8 -1.3 mannitol 2-dehydrogenase compare
SMc01984 -0.8 -3.3 cytochrome-C oxidase transmembrane protein compare
SMc04432 -0.8 -1.2 hypothetical protein compare
SM_b21212 -0.8 -1.7 hypothetical protein compare
SMc01360 -0.8 -1.6 aspartate carbamoyltransferase catalytic subunit compare
SMc01877 -0.8 -3.4 DNA repair protein compare
SMc03242 -0.8 -2.0 GTP-binding protein compare
SMc01607 -0.8 -3.9 permease compare
SMc01012 -0.8 -1.3 hypothetical protein compare
SMc02165 -0.8 -4.2 orotate phosphoribosyltransferase compare
SMc01605 -0.8 -3.8 periplasmic binding ABC transporter protein compare
SMc00053 -0.8 -0.8 monovalent cation/H+ antiporter subunit C compare
SMc02485 -0.8 -1.1 signal peptide protein compare
SMc00514 -0.8 -2.3 monooxygenase compare
SMc02868 -0.8 -2.6 multidrug efflux system protein compare
SMa1323 -0.8 -1.1 Transcription regulator compare
SMc00032 -0.8 -2.9 hypothetical protein compare
SMc01568 -0.8 -1.2 hypothetical protein compare
SMa1239 -0.7 -1.5 NapD component of periplasmic nitrate reductase compare
SMc01606 -0.7 -3.9 permease compare
SMc00024 -0.7 -2.8 chromosome partition protein compare
SM_b21213 -0.7 -2.3 serinethreonine protein phosphatase compare
SMc00804 -0.7 -1.2 hypothetical protein compare
SM_b21551 -0.7 -0.9 hypothetical protein compare
SMc00691 -0.7 -1.8 site-specific tyrosine recombinase XerD compare
SMa1056 -0.7 -0.8 transcriptional regulator compare
SMa0882 -0.7 -1.0 hypothetical protein compare
SMc03124 -0.7 -1.8 periplasmic binding ABC transporter protein compare
SMc02906 -0.7 -0.7 hypothetical protein compare
SMc02569 -0.7 -2.2 imidazole glycerol phosphate synthase subunit HisF compare
SMc04024 -0.7 -2.8 membrane-bound lytic murein transglycosylase compare
SMc04330 -0.7 -1.9 trimethylamine methyltransferase compare
SMc00189 -0.7 -3.1 cytochrome C1 protein compare
SMc02739 -0.7 -2.6 glycine betaine transport ATP-binding ABC transporter protein compare
SMc02114 -0.7 -1.9 hypothetical protein compare
SMc01258 -0.7 -3.0 hypothetical protein compare
SMc01700 -0.7 -3.6 peptidyl-prolyl cis-trans isomerase A compare
SMc01579 -0.7 -0.9 hypothetical protein compare
SMc03128 -0.7 -1.7 ABC transporter permease compare
SMc03249 -0.7 -1.5 hypothetical protein compare
SMc00760 -0.7 -2.8 recombinase A compare
SMc02778 -0.7 -0.8 hydroxyacid aldolase compare
SMc04213 -0.7 -1.2 diacylglycerol kinase compare
SMc02333 -0.7 -1.3 hypothetical protein compare
SMc01146 -0.7 -1.0 deoxyribonucleotide triphosphate pyrophosphatase compare
SMa0638 -0.7 -1.3 hypothetical protein compare
SMc02941 -0.7 -2.1 hypothetical protein compare
SMc02169 -0.6 -1.3 ABC transporter ATP-binding protein compare
SMc00006 -0.6 -1.3 hypothetical protein compare
SM_b20516 -0.6 -2.6 response regulator protein compare
SMc01853 -0.6 -2.5 hypothetical protein compare
SMc00928 -0.6 -1.1 signal peptide protein compare
SMc02155 -0.6 -4.3 hypothetical protein compare
SMa1698 -0.6 -2.0 syrB1 regulator compare
SMc03941 -0.6 -1.3 hypothetical protein compare
SMc03100 -0.6 -1.2 hypothetical protein compare
SMc00085 -0.6 -3.0 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc04404 -0.6 -1.0 amino acid efflux transmembrane protein compare
SM_b20450 -0.6 -4.5 regulatory protein compare
SM_b20655 -0.6 -1.9 hypothetical protein compare
SMc01364 -0.6 -0.8 DNA topoisomerase I compare
SMc01709 -0.6 -1.6 signal peptide protein compare
SMc05020 -0.6 -1.3 entericidin A precursor compare
SM_b20880 -0.6 -3.3 ATP-dependent RNA helicase compare
SMc03050 -0.6 -2.3 flagellar biosynthesis regulatory protein FlaF compare
SM_b20773 -0.6 -1.3 GntR family transcriptional regulator compare
SMa2215 -0.6 -2.8 GntR family transcriptional regulator compare
SMc01929 -0.6 -1.5 hypothetical protein compare
SMc04169 -0.6 -4.5 transcriptional regulator compare
SMa0543 -0.6 -1.1 hypothetical protein compare
SMa1413 -0.6 -1.7 hypothetical protein compare
SM_b20005 -0.6 -1.8 glutathione S-transferase compare
SMc00147 -0.6 -1.8 hypothetical protein compare
SMc00088 -0.6 -1.2 hypothetical protein compare
SMc00557 -0.6 -2.6 alanine racemase compare
SMc00003 -0.6 -1.7 chaperone protein compare
SMc04231 -0.6 -3.4 excinuclease ABC subunit B compare
SMa1878 -0.6 -2.3 transposase compare
SMa1973 -0.6 -2.1 hypothetical protein compare
SMc03140 -0.6 -2.6 transcriptional regulator compare
SMc04219 -0.6 -2.6 ABC transporter ATP-binding protein compare
SMc03844 -0.6 -1.7 hypothetical protein compare
SMa0697 -0.6 -3.0 carbamate kinase compare
SMa1136 -0.6 -1.0 hypothetical protein compare
SM_b21173 -0.6 -1.2 hypothetical protein compare
SMc00378 -0.6 -1.3 exodeoxyribonuclease VII large subunit compare
SMc01461 -0.6 -2.2 DNA helicase II protein compare
SMc04265 -0.6 -2.2 hypothetical protein compare
SMc00981 -0.5 -2.9 ferredoxin protein compare
SMc01347 -0.5 -2.2 hypothetical protein compare
SM_b20401 -0.5 -2.0 hypothetical protein compare
SM_b20181 -0.5 -2.0 ABC transporter substrate-binding protein compare
SMc00619 -0.5 -1.1 hypothetical protein compare
SMc03935 -0.5 -3.6 hypothetical protein compare
SMa0995 -0.5 -1.3 TRm5 transposase compare
SMa1697 -0.5 -1.2 hypothetical protein compare
SMa2269 -0.5 -2.7 hypothetical protein compare
SMa0738 -0.5 -1.8 CspA6 cold shock protein transcriptional regulator compare
SMc04436 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in temperature experiments