Experiment set2IT068 for Herbaspirillum seropedicae SmR1

LB with sodium fluoride 100 mM

Group: stress
Media: LB + sodium fluoride (100 mM)
Culturing: HerbieS_ML4, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=750 rpm
Growth: about 3.8 generations
By: Mark on 3/10/2016
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: Herbie_SP2 B5

Specific Phenotypes

For 5 genes in this experiment

For stress sodium fluoride in Herbaspirillum seropedicae SmR1

For stress sodium fluoride across organisms

SEED Subsystems

Subsystem	#Specific
Central meta-cleavage pathway of aromatic compound degradation	1
DNA repair, UvrABC system	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Nucleotide sugars metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis	3	2	1
superpathway of CDP-glucose-derived O-antigen building blocks biosynthesis	8	2	1