Experiment set2IT068 for Burkholderia phytofirmans PsJN

Compare to:

LB, 37C

200 most important genes:

  gene name fitness t score description  
BPHYT_RS34815 -4.8 -2.8 ABC transporter compare
BPHYT_RS33765 -4.6 -1.3 membrane protein compare
BPHYT_RS11635 -4.2 -1.2 RNA polymerase subunit sigma-24 compare
BPHYT_RS04370 -3.2 -1.9 glycosyl transferase compare
BPHYT_RS09585 -2.9 -2.1 hypothetical protein compare
BPHYT_RS32260 -2.7 -1.5 hypothetical protein compare
BPHYT_RS14855 -2.7 -1.6 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS14865 -2.5 -2.7 UDP-glucose 6-dehydrogenase compare
BPHYT_RS22205 -2.5 -4.0 hypothetical protein compare
BPHYT_RS16175 -2.5 -2.2 hemolysin D compare
BPHYT_RS12925 -2.5 -1.2 exodeoxyribonuclease III compare
BPHYT_RS03725 -2.4 -1.5 serine hydroxymethyltransferase compare
BPHYT_RS32395 -2.4 -1.2 hypothetical protein compare
BPHYT_RS15075 -2.2 -1.9 dihydrokaempferol 4-reductase compare
BPHYT_RS23455 -2.1 -1.1 phosphorylase compare
BPHYT_RS06975 -2.1 -2.5 glutamate racemase compare
BPHYT_RS02975 -2.1 -2.6 membrane protein compare
BPHYT_RS20865 -2.1 -2.1 2-hydroxyacid dehydrogenase compare
BPHYT_RS02860 -2.1 -1.2 membrane protein compare
BPHYT_RS16815 -2.1 -1.7 ureidoglycolate hydrolase compare
BPHYT_RS27495 -2.1 -1.2 hypothetical protein compare
BPHYT_RS23270 -2.0 -1.4 enoyl-CoA hydratase compare
BPHYT_RS08600 -2.0 -1.5 hypothetical protein compare
BPHYT_RS07540 -2.0 -1.0 hypothetical protein compare
BPHYT_RS17890 -2.0 -1.8 shikimate kinase compare
BPHYT_RS34295 -2.0 -1.0 fimbrial protein compare
BPHYT_RS34810 -1.9 -3.0 RND transporter compare
BPHYT_RS04285 -1.9 -1.7 rhamnosyltransferase compare
BPHYT_RS04290 -1.8 -1.5 glycosyl transferase family 2 compare
BPHYT_RS36005 -1.8 -3.3 hypothetical protein compare
BPHYT_RS03400 -1.8 -1.2 ATP-dependent DNA helicase RecG compare
BPHYT_RS21170 -1.8 -2.3 LysR family transcriptional regulator compare
BPHYT_RS36480 -1.7 -3.1 hypothetical protein compare
BPHYT_RS23840 -1.7 -4.1 methyltransferase compare
BPHYT_RS23605 -1.7 -2.7 hypothetical protein compare
BPHYT_RS24745 -1.7 -3.3 transcriptional regulator compare
BPHYT_RS33615 -1.7 -2.2 decarboxylase compare
BPHYT_RS34490 -1.7 -1.0 hypothetical protein compare
BPHYT_RS28535 -1.7 -0.8 response regulator receiver compare
BPHYT_RS16675 -1.6 -1.4 dihydroorotase compare
BPHYT_RS30610 -1.6 -1.7 major facilitator transporter compare
BPHYT_RS10740 -1.6 -1.4 LuxR family transcriptional regulator compare
BPHYT_RS21905 -1.6 -1.0 IclR family transcriptional regulator compare
BPHYT_RS14060 -1.6 -1.6 peptidase M23 compare
BPHYT_RS07130 -1.6 -1.3 biopolymer transporter ExbD compare
BPHYT_RS02865 -1.6 -2.5 hypothetical protein compare
BPHYT_RS09690 -1.5 -1.2 phosphate starvation-inducible protein PsiF compare
BPHYT_RS36025 -1.5 -3.6 hypothetical protein compare
BPHYT_RS26355 -1.5 -1.3 hypothetical protein compare
BPHYT_RS22260 -1.5 -1.4 hypothetical protein compare
BPHYT_RS08565 -1.5 -1.1 dihydroorotate dehydrogenase compare
BPHYT_RS16215 -1.5 -3.4 sensor histidine kinase compare
BPHYT_RS28930 -1.5 -0.8 chromosome partitioning protein ParA compare
BPHYT_RS33380 -1.5 -2.3 2-nitropropane dioxygenase compare
BPHYT_RS35770 -1.5 -0.9 glyoxalase compare
BPHYT_RS03740 -1.5 -1.8 hypothetical protein compare
BPHYT_RS00815 -1.5 -1.1 hypothetical protein compare
BPHYT_RS33135 -1.5 -1.9 LysR family transcriptional regulator compare
BPHYT_RS31255 -1.5 -1.2 cytochrome B561 compare
BPHYT_RS23940 -1.5 -1.2 GntR family transcriptional regulator compare
BPHYT_RS25450 -1.5 -0.9 membrane protein compare
BPHYT_RS14370 -1.5 -1.7 ribonuclease III compare
BPHYT_RS28790 -1.5 -1.7 membrane protein compare
BPHYT_RS21460 -1.4 -1.1 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS01485 -1.4 -0.8 histidine kinase compare
BPHYT_RS09905 -1.4 -1.3 hypothetical protein compare
BPHYT_RS04010 -1.4 -1.0 glycosyl transferase compare
BPHYT_RS30450 -1.4 -0.7 ABC transporter permease compare
BPHYT_RS10395 -1.4 -1.4 sulfonate ABC transporter compare
BPHYT_RS09500 -1.4 -3.2 glucose-6-phosphate isomerase compare
BPHYT_RS16210 -1.4 -3.4 peptidase compare
BPHYT_RS11425 -1.3 -2.4 chemotaxis protein compare
BPHYT_RS22505 -1.3 -2.3 alpha/beta hydrolase compare
BPHYT_RS24565 -1.3 -3.3 membrane protein compare
BPHYT_RS20220 -1.3 -0.6 antibiotic synthesis protein MbtH compare
BPHYT_RS04385 -1.3 -1.5 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS00225 -1.3 -1.7 hypothetical protein compare
BPHYT_RS36275 -1.3 -1.2 hypothetical protein compare
BPHYT_RS13935 -1.3 -1.7 mannosyltransferase compare
BPHYT_RS36000 -1.3 -1.5 hypothetical protein compare
BPHYT_RS36570 -1.3 -1.5 histone compare
BPHYT_RS14400 -1.3 -1.5 anti-sigma factor compare
BPHYT_RS13470 -1.3 -0.7 arylsulfate sulfotransferase compare
BPHYT_RS32470 -1.3 -1.3 membrane protein compare
BPHYT_RS23395 -1.2 -0.9 glycosyl transferase compare
BPHYT_RS05580 -1.2 -1.5 hypothetical protein compare
BPHYT_RS26340 -1.2 -2.4 cupin compare
BPHYT_RS06175 -1.2 -3.1 LPS biosynthesis compare
BPHYT_RS34765 -1.2 -1.5 chemotaxis protein compare
BPHYT_RS22265 -1.2 -0.9 hypothetical protein compare
BPHYT_RS16710 -1.2 -1.1 LysR family transcriptional regulator compare
BPHYT_RS13245 -1.2 -2.7 hypothetical protein compare
BPHYT_RS21970 -1.2 -2.3 nucleoside hydrolase compare
BPHYT_RS10650 -1.2 -1.0 membrane protein compare
BPHYT_RS28885 -1.2 -1.1 betaine-aldehyde dehydrogenase compare
BPHYT_RS17405 -1.2 -0.8 indole-3-glycerol phosphate synthase compare
BPHYT_RS20595 -1.1 -2.3 hypothetical protein compare
BPHYT_RS09765 -1.1 -1.5 G-D-S-L family lipolytic protein compare
BPHYT_RS23650 -1.1 -0.6 hypothetical protein compare
BPHYT_RS03015 -1.1 -0.7 aldolase compare
BPHYT_RS25575 -1.1 -0.8 alpha/beta hydrolase compare
BPHYT_RS21485 -1.1 -0.7 hypothetical protein compare
BPHYT_RS31805 -1.1 -2.4 beta-lactamase compare
BPHYT_RS05395 -1.1 -0.9 hypothetical protein compare
BPHYT_RS20085 -1.1 -1.2 mannosyltransferase compare
BPHYT_RS29745 -1.1 -1.6 phosphonopyruvate decarboxylase compare
BPHYT_RS16250 -1.1 -0.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS12375 -1.1 -3.7 peptide ABC transporter permease compare
BPHYT_RS15015 -1.1 -1.3 ArsR family transcriptional regulator compare
BPHYT_RS10340 -1.1 -2.5 sensor protein Chase2 compare
BPHYT_RS21940 -1.1 -1.8 hemolysin D compare
BPHYT_RS33280 -1.1 -1.5 membrane protein compare
BPHYT_RS16445 -1.0 -1.3 RNA helicase compare
BPHYT_RS13610 -1.0 -2.9 MerR family transcriptional regulator compare
BPHYT_RS18705 -1.0 -0.8 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS07450 -1.0 -2.0 histidine kinase compare
BPHYT_RS14010 -1.0 -2.3 NUDIX hydrolase compare
BPHYT_RS10540 -1.0 -0.8 secretion protein compare
BPHYT_RS26925 -1.0 -0.9 NIPSNAP family containing protein compare
BPHYT_RS34895 -1.0 -2.7 endonuclease compare
BPHYT_RS16345 -1.0 -2.5 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS29320 -1.0 -0.9 histidine kinase compare
BPHYT_RS31900 -1.0 -1.6 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS29100 -1.0 -1.1 ketosteroid isomerase compare
BPHYT_RS24945 -1.0 -3.0 alkylhydroperoxidase compare
BPHYT_RS30845 -1.0 -1.1 polyketide cyclase compare
BPHYT_RS21335 -1.0 -1.3 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS07600 -1.0 -2.0 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS05705 -1.0 -0.7 hypothetical protein compare
BPHYT_RS00145 -1.0 -2.0 hypothetical protein compare
BPHYT_RS23475 -1.0 -1.1 luciferase compare
BPHYT_RS30795 -1.0 -0.9 short-chain dehydrogenase compare
BPHYT_RS33805 -1.0 -0.8 hypothetical protein compare
BPHYT_RS02540 -1.0 -0.9 hypothetical protein compare
BPHYT_RS32750 -1.0 -0.8 lipoprotein compare
BPHYT_RS02760 -1.0 -2.1 cytochrome BD oxidase subunit II compare
BPHYT_RS28880 -1.0 -1.6 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BPHYT_RS14505 -1.0 -1.5 membrane protein compare
BPHYT_RS20885 -1.0 -1.5 nuclear protein SET compare
BPHYT_RS14395 -1.0 -2.4 sugar dehydratase compare
BPHYT_RS11250 -1.0 -1.3 saccharopine dehydrogenase compare
BPHYT_RS10065 -1.0 -0.8 cytochrome C oxidase subunit I compare
BPHYT_RS34300 -1.0 -2.1 major facilitator transporter compare
BPHYT_RS17885 -1.0 -3.4 3-dehydroquinate synthase compare
BPHYT_RS26025 -1.0 -0.6 hypothetical protein compare
BPHYT_RS05320 -1.0 -1.1 beta-lactamase compare
BPHYT_RS03235 -1.0 -1.2 enoyl-CoA hydratase compare
BPHYT_RS30485 -1.0 -0.7 ABC transporter ATP-binding protein compare
BPHYT_RS27995 -0.9 -1.6 hypothetical protein compare
BPHYT_RS26050 -0.9 -2.0 ABC transporter permease compare
BPHYT_RS27640 -0.9 -2.7 acetoacetyl-CoA reductase compare
BPHYT_RS16840 -0.9 -1.9 transketolase compare
BPHYT_RS33585 -0.9 -1.3 exodeoxyribonuclease VII small subunit compare
BPHYT_RS20070 -0.9 -1.0 hypothetical protein compare
BPHYT_RS01530 -0.9 -1.1 penicillin-binding protein 2 compare
BPHYT_RS36010 -0.9 -2.0 hypothetical protein compare
BPHYT_RS02130 -0.9 -1.6 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS09650 -0.9 -0.9 hypothetical protein compare
BPHYT_RS26100 -0.9 -2.9 gamma-glutamyltransferase compare
BPHYT_RS31495 -0.9 -1.5 transposase compare
BPHYT_RS09710 -0.9 -2.7 undecaprenyl-phosphate glucose phosphotransferase compare
BPHYT_RS02285 -0.9 -2.7 cell division protein compare
BPHYT_RS25060 -0.9 -1.5 membrane protein compare
BPHYT_RS03260 -0.9 -2.3 glycine cleavage system regulatory protein compare
BPHYT_RS27425 -0.9 -2.1 C4-dicarboxylate ABC transporter compare
BPHYT_RS29750 -0.9 -2.0 phosphoenolpyruvate phosphomutase compare
BPHYT_RS18515 -0.9 -1.2 hypothetical protein compare
BPHYT_RS12550 -0.9 -0.7 GTP-binding protein HflX compare
BPHYT_RS10710 -0.9 -1.4 sensor histidine kinase compare
BPHYT_RS26005 -0.9 -1.2 MarR family transcriptional regulator compare
BPHYT_RS25395 -0.9 -1.0 3-oxoacyl-ACP reductase compare
BPHYT_RS24755 -0.9 -1.4 catalase compare
BPHYT_RS22955 -0.9 -2.0 isoprenylcysteine carboxyl methyltransferase compare
BPHYT_RS20095 -0.9 -0.6 transcriptional regulator compare
BPHYT_RS08830 -0.9 -2.3 hydroxypyruvate isomerase compare
BPHYT_RS25560 -0.9 -1.0 RNA polymerase sigma factor compare
BPHYT_RS05810 -0.9 -1.8 hypothetical protein compare
BPHYT_RS13915 -0.9 -0.5 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase compare
BPHYT_RS21585 -0.9 -1.2 short-chain dehydrogenase compare
BPHYT_RS29620 -0.9 -0.5 hypothetical protein compare
BPHYT_RS28595 -0.9 -0.6 glyoxalase compare
BPHYT_RS10945 -0.9 -0.9 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS15020 -0.9 -4.5 tetratricopeptide repeat protein compare
BPHYT_RS20015 -0.9 -1.6 MFS transporter compare
BPHYT_RS33230 -0.9 -2.1 amino acid permease compare
BPHYT_RS12615 -0.9 -0.8 dihydrodipicolinate synthase compare
BPHYT_RS36385 -0.9 -0.6 TetR family transcriptional regulator compare
BPHYT_RS07415 -0.9 -2.7 hypothetical protein compare
BPHYT_RS08580 -0.8 -2.2 ADP-ribose pyrophosphatase compare
BPHYT_RS23515 -0.8 -1.7 porin compare
BPHYT_RS36050 -0.8 -2.0 hypothetical protein compare
BPHYT_RS10390 -0.8 -2.9 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS06325 -0.8 -2.0 ATPase compare
BPHYT_RS12990 -0.8 -1.3 iron transporter compare
BPHYT_RS17165 -0.8 -2.1 cell division protein ZapD compare
BPHYT_RS26480 -0.8 -2.2 peptidase M1 compare
BPHYT_RS11080 -0.8 -1.4 hypothetical protein compare
BPHYT_RS27090 -0.8 -2.4 aldo/keto reductase compare
BPHYT_RS06410 -0.8 -1.5 transcriptional regulator compare
BPHYT_RS16760 -0.8 -2.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in temperature experiments