Experiment set2IT068 for Burkholderia phytofirmans PsJN

Compare to:

LB, 37C

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS14140 +2.9 4.7 phosphate transporter permease subunit PstC compare
BPHYT_RS12985 +2.7 5.5 amino acid acetyltransferase compare
BPHYT_RS18340 +2.5 4.3 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS12465 +2.4 9.7 inositol monophosphatase compare
BPHYT_RS29855 +2.2 2.6 protein-tyrosine-phosphatase compare
BPHYT_RS01435 +2.0 18.0 LysR family transcriptional regulator compare
BPHYT_RS33920 +2.0 12.3 type II citrate synthase compare
BPHYT_RS13645 +1.9 14.5 threonine--tRNA ligase compare
BPHYT_RS06105 +1.8 2.6 hypothetical protein compare
BPHYT_RS33580 +1.8 5.1 geranyltranstransferase compare
BPHYT_RS14135 +1.7 7.6 phosphate transporter permease subunit PtsA compare
BPHYT_RS15305 +1.7 5.0 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
BPHYT_RS17095 +1.7 4.6 proline--tRNA ligase compare
BPHYT_RS07705 +1.7 4.0 arginine succinyltransferase compare
BPHYT_RS06790 +1.6 10.2 hypothetical protein compare
BPHYT_RS01625 +1.5 7.0 chemotaxis protein CheY compare
BPHYT_RS17185 +1.5 8.4 N-acetylglutamate synthase compare
BPHYT_RS33515 +1.5 5.6 porin compare
BPHYT_RS02965 +1.5 3.3 membrane protein compare
BPHYT_RS07570 +1.4 1.7 hypothetical protein compare
BPHYT_RS30365 +1.3 1.3 beta-lactamase compare
BPHYT_RS21470 +1.3 2.2 6-hydroxynicotinate reductase compare
BPHYT_RS25870 +1.3 1.4 type III secretion system ATPase compare
BPHYT_RS12160 +1.3 3.0 peptide deformylase compare
BPHYT_RS13080 +1.3 1.8 hypothetical protein compare
BPHYT_RS25165 +1.3 3.0 HTH-type transcriptional regulator BetI compare
BPHYT_RS00980 +1.3 1.6 GCN5 family acetyltransferase compare
BPHYT_RS35980 +1.3 4.0 hypothetical protein compare
BPHYT_RS11685 +1.3 1.7 phasin family protein compare
BPHYT_RS28830 +1.2 1.2 LysR family transcriptional regulator compare
BPHYT_RS10470 +1.2 1.9 hypothetical protein compare
BPHYT_RS23910 +1.2 1.5 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS27940 +1.1 2.1 FAD-binding protein compare
BPHYT_RS07255 +1.1 1.5 4-oxalocrotonate decarboxylase compare
BPHYT_RS34900 +1.1 3.5 hypothetical protein compare
BPHYT_RS13390 +1.1 1.3 IclR family transcriptional regulator compare
BPHYT_RS05910 +1.1 2.6 hypothetical protein compare
BPHYT_RS03470 +1.1 4.8 LysR family transcriptional regulator compare
BPHYT_RS00380 +1.1 3.0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS35735 +1.1 1.6 nitroreductase compare
BPHYT_RS05905 +1.1 1.1 hypothetical protein compare
BPHYT_RS13835 +1.1 1.3 S-adenosylhomocysteine nucleosidase compare
BPHYT_RS27330 +1.1 1.1 hypothetical protein compare
BPHYT_RS28910 +1.0 1.8 diguanylate phosphodiesterase compare
BPHYT_RS25005 +1.0 1.5 FMN reductase compare
BPHYT_RS33030 +1.0 1.2 hypothetical protein compare
BPHYT_RS26685 +1.0 1.4 precorrin-8X methylmutase compare
BPHYT_RS12820 +1.0 5.1 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS11825 +1.0 1.1 cytosine deaminase compare
BPHYT_RS14790 +1.0 3.8 D-amino acid dehydrogenase compare
BPHYT_RS17490 +1.0 2.2 haloacid dehalogenase compare
BPHYT_RS25070 +1.0 1.4 choline ABC transporter permease compare
BPHYT_RS02010 +1.0 1.4 copper homeostasis protein CutC compare
BPHYT_RS30425 +1.0 1.4 LysR family transcriptional regulator compare
BPHYT_RS25770 +1.0 0.7 hypothetical protein compare
BPHYT_RS06375 +1.0 3.1 ribonuclease compare
BPHYT_RS08765 +1.0 1.1 ABC transporter ATP-binding protein compare
BPHYT_RS17945 +1.0 1.9 cytochrome C biogenesis protein compare
BPHYT_RS00740 +1.0 1.6 hypothetical protein compare
BPHYT_RS26960 +1.0 1.9 LysR family transcriptional regulator compare
BPHYT_RS35500 +1.0 2.4 major facilitator transporter compare
BPHYT_RS26490 +1.0 1.1 hypothetical protein compare
BPHYT_RS26930 +1.0 3.6 mechanosensitive ion channel protein compare
BPHYT_RS22285 +1.0 3.3 hypothetical protein compare
BPHYT_RS33885 +1.0 6.6 tRNA pseudouridine synthase A compare
BPHYT_RS20630 +1.0 1.2 patatin compare
BPHYT_RS08405 +1.0 1.4 hypothetical protein compare
BPHYT_RS11400 +1.0 1.9 hypothetical protein compare
BPHYT_RS16335 +0.9 1.1 membrane protein compare
BPHYT_RS18780 +0.9 3.0 flagellar motor switch protein FliG compare
BPHYT_RS12845 +0.9 7.5 ATPase compare
BPHYT_RS35215 +0.9 0.8 dehydrogenase compare
BPHYT_RS25980 +0.9 0.9 urea carboxylase compare
BPHYT_RS20890 +0.9 2.3 transglycosylase compare
BPHYT_RS09660 +0.9 6.0 trehalose-6-phosphate synthase compare
BPHYT_RS06685 +0.9 1.6 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS08880 +0.9 2.5 phosphate transport regulator compare
BPHYT_RS18420 +0.9 1.2 hypothetical protein compare
BPHYT_RS02905 +0.9 8.2 RNA polymerase subunit sigma-54 compare
BPHYT_RS14130 +0.9 3.9 phosphate ABC transporter ATP-binding protein compare
BPHYT_RS06530 +0.9 1.0 membrane protein compare
BPHYT_RS21625 +0.9 1.0 LysR family transcriptional regulator compare
BPHYT_RS27980 +0.9 2.1 ABC transporter substrate-binding protein compare
BPHYT_RS07080 +0.9 2.6 glutathione S-transferase compare
BPHYT_RS17765 +0.9 3.7 toluene ABC transporter ATP-binding protein compare
BPHYT_RS07085 +0.9 1.9 LysR family transcriptional regulator compare
BPHYT_RS14145 +0.9 4.7 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS31970 +0.9 2.0 cupin compare
BPHYT_RS05535 +0.9 2.4 diguanylate cyclase compare
BPHYT_RS08960 +0.9 1.0 threonine synthase compare
BPHYT_RS26920 +0.9 2.4 major facilitator transporter compare
BPHYT_RS36220 +0.9 1.3 hypothetical protein compare
BPHYT_RS26910 +0.9 0.9 hypothetical protein compare
BPHYT_RS02970 +0.9 6.9 excinuclease ABC subunit A compare
BPHYT_RS34185 +0.9 2.1 cold-shock protein compare
BPHYT_RS29110 +0.9 1.5 DNA-directed DNA polymerase compare
BPHYT_RS28900 +0.9 1.6 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BPHYT_RS23500 +0.9 1.6 hypothetical protein compare
BPHYT_RS16430 +0.9 6.5 cytochrome C compare
BPHYT_RS00440 +0.9 2.6 ripening-induced protein-Zn-containing oxidoreductase compare
BPHYT_RS04015 +0.9 1.7 glycosyl transferase compare
BPHYT_RS29695 +0.9 1.7 hypothetical protein compare
BPHYT_RS34100 +0.9 1.8 spermidine/putrescine ABC transporter ATP-binding protein compare
BPHYT_RS00790 +0.9 1.3 conjugal transfer protein TraF compare
BPHYT_RS28620 +0.9 1.4 enoyl-CoA hydratase compare
BPHYT_RS12150 +0.9 4.9 PII uridylyl-transferase compare
BPHYT_RS02885 +0.8 5.5 glmZ(sRNA)-inactivating NTPase compare
BPHYT_RS02525 +0.8 4.7 membrane protein compare
BPHYT_RS22420 +0.8 1.2 membrane protein compare
BPHYT_RS11705 +0.8 1.0 hypothetical protein compare
BPHYT_RS04860 +0.8 1.6 ABC transporter ATP-binding protein compare
BPHYT_RS10140 +0.8 2.2 ABC transporter substrate-binding protein compare
BPHYT_RS20365 +0.8 0.9 LysR family transcriptional regulator compare
BPHYT_RS13200 +0.8 1.0 molybdopterin binding oxidoreductase compare
BPHYT_RS12230 +0.8 2.6 hypothetical protein compare
BPHYT_RS33850 +0.8 1.0 sporulation protein compare
BPHYT_RS16320 +0.8 1.7 cyclic pyranopterin monophosphate synthase accessory protein compare
BPHYT_RS00705 +0.8 1.8 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS22270 +0.8 2.5 membrane protein compare
BPHYT_RS04945 +0.8 7.2 membrane protein compare
BPHYT_RS08080 +0.8 4.9 tRNA pseudouridine synthase B compare
BPHYT_RS27950 +0.8 1.8 dihydroxyacetone kinase compare
BPHYT_RS32150 +0.8 1.0 hypothetical protein compare
BPHYT_RS28875 +0.8 2.9 5-oxo-1,2,5-tricarboxylic-3-penten acid decarboxylase compare
BPHYT_RS14065 +0.8 2.7 hypothetical protein compare
BPHYT_RS18655 +0.8 1.6 3-oxoacyl-ACP synthase compare
BPHYT_RS28440 +0.8 1.4 heat shock Hsp20 compare
BPHYT_RS05560 +0.8 3.2 Fis family transcriptional regulator compare
BPHYT_RS02660 +0.8 0.9 membrane protein compare
BPHYT_RS13190 +0.8 3.5 membrane protein compare
BPHYT_RS05825 +0.8 1.0 hypothetical protein compare
BPHYT_RS11095 +0.8 2.0 glycosyl transferase compare
BPHYT_RS32210 +0.8 0.4 hypothetical protein compare
BPHYT_RS01660 +0.8 2.2 hypothetical protein compare
BPHYT_RS05650 +0.8 1.0 hypothetical protein compare
BPHYT_RS26890 +0.8 2.6 LysR family transcriptional regulator compare
BPHYT_RS02530 +0.8 3.1 hypothetical protein compare
BPHYT_RS02100 +0.8 1.1 AsnC family transcriptional regulator compare
BPHYT_RS11810 +0.8 0.6 LysR family transcriptional regulator compare
BPHYT_RS04965 +0.8 3.9 ATP-binding protein compare
BPHYT_RS19890 +0.8 1.0 hypothetical protein compare
BPHYT_RS22330 +0.8 1.4 PhoB family transcriptional regulator compare
BPHYT_RS12920 +0.8 1.8 hypothetical protein compare
BPHYT_RS05030 +0.8 1.1 sugar ABC transporter permease compare
BPHYT_RS17755 +0.8 2.9 ABC transporter substrate-binding protein compare
BPHYT_RS05175 +0.8 2.4 hypothetical protein compare
BPHYT_RS05620 +0.8 1.1 CsbD family protein compare
BPHYT_RS33905 +0.8 1.2 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS23830 +0.8 1.2 acetyl-CoA hydrolase compare
BPHYT_RS30265 +0.8 0.8 hypothetical protein compare
BPHYT_RS09330 +0.8 4.9 phytoene synthase compare
BPHYT_RS20440 +0.8 1.1 IclR family transcriptional regulator compare
BPHYT_RS26940 +0.8 1.5 nuclease compare
BPHYT_RS26390 +0.7 0.8 antibiotic resistance protein compare
BPHYT_RS32880 +0.7 0.8 alanine acetyltransferase compare
BPHYT_RS33820 +0.7 5.0 histidine kinase compare
BPHYT_RS32845 +0.7 1.5 ABC transporter substrate-binding protein compare
BPHYT_RS10465 +0.7 2.3 hypothetical protein compare
BPHYT_RS17150 +0.7 2.5 type II secretion system protein compare
BPHYT_RS29995 +0.7 3.6 acyltransferase compare
BPHYT_RS25970 +0.7 0.8 urea amidolyase compare
BPHYT_RS08170 +0.7 1.3 pilus assembly protein CpaB compare
BPHYT_RS24135 +0.7 1.4 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS13715 +0.7 2.6 hypothetical protein compare
BPHYT_RS18790 +0.7 3.0 ATP synthase compare
BPHYT_RS17430 +0.7 2.9 thiol:disulfide interchange protein compare
BPHYT_RS28765 +0.7 1.5 fumarylacetoacetate hydrolase compare
BPHYT_RS08885 +0.7 3.5 inorganic phosphate transporter compare
BPHYT_RS07920 +0.7 1.3 hypothetical protein compare
BPHYT_RS23535 +0.7 1.4 ABC transporter substrate-binding protein compare
BPHYT_RS23480 +0.7 1.4 hypothetical protein compare
BPHYT_RS29300 +0.7 1.8 endoribonuclease L-PSP compare
BPHYT_RS31440 +0.7 1.5 hypothetical protein compare
BPHYT_RS14755 +0.7 1.7 tRNA (guanine-N(1)-)-methyltransferase compare
BPHYT_RS05575 +0.7 3.6 Fis family transcriptional regulator compare
BPHYT_RS27485 +0.7 1.5 NAD-dependent dehydratase compare
BPHYT_RS22355 +0.7 1.4 HAD family hydrolase compare
BPHYT_RS26950 +0.7 2.8 MFS transporter compare
BPHYT_RS04950 +0.7 4.8 hypothetical protein compare
BPHYT_RS09860 +0.7 0.6 pilus assembly protein PilP compare
BPHYT_RS06985 +0.7 2.5 fumarate hydratase compare
BPHYT_RS08945 +0.7 3.8 hypothetical protein compare
BPHYT_RS01965 +0.7 1.2 tRNA-Ala compare
BPHYT_RS12635 +0.7 1.4 translation factor Sua5 compare
BPHYT_RS33890 +0.7 3.4 fimbrial protein FimV compare
BPHYT_RS08325 +0.7 3.4 glucose dehydrogenase compare
BPHYT_RS19660 +0.7 1.1 hypothetical protein compare
BPHYT_RS28280 +0.7 1.0 hypothetical protein compare
BPHYT_RS36545 +0.7 3.1 Resolvase helix-turn-helix domain-containing protein compare
BPHYT_RS35645 +0.7 2.6 porin compare
BPHYT_RS22880 +0.7 2.1 hypothetical protein compare
BPHYT_RS26240 +0.7 1.0 hypothetical protein compare
BPHYT_RS30865 +0.7 1.2 sugar ABC transporter ATP-binding protein compare
BPHYT_RS06335 +0.7 0.8 CopG family transcriptional regulator compare
BPHYT_RS07035 +0.7 1.9 transcriptional regulator compare
BPHYT_RS31465 +0.7 1.1 D-isomer specific 2-hydroxyacid dehydrogenase compare
BPHYT_RS20845 +0.7 1.1 peroxidase compare
BPHYT_RS02650 +0.7 1.1 membrane protein compare
BPHYT_RS00750 +0.7 1.5 SpoVT/AbrB domain-containing protein compare
BPHYT_RS05085 +0.7 1.4 LysR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in temperature experiments