Experiment set2IT067 for Sinorhizobium meliloti 1021

Compare to:

LB, 23C

200 most important genes:

  gene name fitness t score description  
SMc03978 -3.6 -5.4 transketolase compare
SMc03763 -3.4 -5.1 cytosine-specific methyltransferase compare
SMc02363 -3.2 -4.8 cytochrome C-type biogenesis transmembrane protein compare
SMc03849 -3.2 -2.8 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02115 -3.0 -1.5 hypothetical protein compare
SMc00427 -2.9 -4.4 peptide chain release factor RF-3 protein compare
SMa0789 -2.9 -5.0 GntR family transcriptional regulator compare
SMc00450 -2.8 -4.4 protoheme IX farnesyltransferase compare
SMc01215 -2.6 -6.6 carbamoyl phosphate synthase large subunit compare
SMc01569 -2.6 -2.9 carbamoyl phosphate synthase small subunit compare
SMc01147 -2.5 -4.4 coproporphyrinogen III oxidase compare
SMc00928 -2.1 -2.3 signal peptide protein compare
SMc02753 -2.1 -2.1 PTS system transporter subunit IIA compare
SMc02850 -2.1 -4.0 DNA polymerase I compare
SMc00010 -2.1 -2.7 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02144 -2.1 -4.6 phosphate ABC transporter permease compare
SMc03242 -1.9 -4.0 GTP-binding protein compare
SMc01880 -1.9 -3.0 pantoate--beta-alanine ligase compare
SMc00619 -1.9 -2.2 hypothetical protein compare
SMc02147 -1.9 -7.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02145 -1.8 -1.6 signal peptide protein compare
SMc02140 -1.8 -2.6 phosphate regulon transcriptional regulatory protein compare
SMc02867 -1.8 -4.2 multidrug-efflux system transmembrane protein compare
SMc02234 -1.8 -4.0 hypothetical protein compare
SMc00067 -1.7 -6.3 outer-membranne lipoprotein compare
SMc00914 -1.7 -4.1 oxidoreductase compare
SMc01208 -1.7 -2.9 peptidyl-prolyl cis-trans isomerase B protein compare
SMc01183 -1.7 -2.3 LexA repressor compare
SMc02362 -1.7 -3.6 cytochrome c-type biogenesis protein CcmE compare
SMc00876 -1.7 -4.6 ATP-binding MRP protein compare
SMc02683 -1.6 -2.6 hypothetical protein compare
SMa0848 -1.6 -3.0 hypothetical protein compare
SMc00013 -1.6 -2.9 cytochrome C oxidase subunit III transmembrane protein compare
SMc02143 -1.6 -3.4 phosphate ABC transporter permease compare
SMc00302 -1.5 -3.8 hypothetical protein compare
SMc02141 -1.5 -3.7 phosphate transporter PhoU compare
SM_b20021 -1.5 -1.4 transcriptional regulator compare
SMc00492 -1.4 -1.2 hypothetical protein compare
SMc01342 -1.4 -4.8 hypothetical protein compare
SMc02833 -1.4 -2.4 penicillin-insensitive murein endopeptidase compare
SMc01242 -1.4 -3.6 signal peptide protein compare
SMc02232 -1.4 -3.6 hypothetical protein compare
SMc01881 -1.4 -3.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00053 -1.4 -1.2 monovalent cation/H+ antiporter subunit C compare
SMc04330 -1.4 -2.5 trimethylamine methyltransferase compare
SMc03850 -1.3 -1.4 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02495 -1.3 -1.1 translaldolase compare
SMc00073 -1.3 -2.0 hypothetical protein compare
SMc01850 -1.3 -3.1 hypothetical protein compare
SMc02102 -1.2 -4.4 hypothetical protein compare
SMc02484 -1.2 -4.6 amino acid efflux transmembrane protein compare
SMc04432 -1.2 -1.8 hypothetical protein compare
SMc02142 -1.2 -5.1 phosphate transporter ATP-binding protein compare
SMc03967 -1.2 -1.0 Holliday junction resolvase compare
SMc03127 -1.2 -2.2 ABC transporter permease compare
SMc02909 -1.2 -2.4 transglycosylase transmembrane protein compare
SMc01568 -1.1 -1.3 hypothetical protein compare
SMc04085 -1.1 -3.3 hypothetical protein compare
SMc01361 -1.1 -3.5 dihydroorotase compare
SMc02866 -1.1 -3.2 transcriptional regulator compare
SMc00088 -1.1 -2.1 hypothetical protein compare
SM_b20258 -1.1 -3.1 transcriptional regulator compare
SMc01845 -1.1 -1.8 transglycosylase transmembrane protein compare
SMa1639 -1.1 -1.3 hypothetical protein compare
SMc02149 -1.1 -1.8 hypothetical protein compare
SMc00815 -1.1 -1.4 inosine 5'-monophosphate dehydrogenase compare
SMc01461 -1.1 -4.2 DNA helicase II protein compare
SMc02897 -1.0 -2.2 cytochrome C transmembrane protein compare
SMc04040 -1.0 -2.3 heat shock protein compare
SMc00987 -1.0 -2.2 hypothetical protein compare
SMa1924 -1.0 -0.9 hypothetical protein compare
SMc03050 -1.0 -2.1 flagellar biosynthesis regulatory protein FlaF compare
SMc00451 -1.0 -4.3 processing protease compare
SMc01438 -1.0 -2.9 protease precursor signal peptide protein compare
SMc02894 -1.0 -2.4 hypothetical protein compare
SMc04024 -1.0 -3.2 membrane-bound lytic murein transglycosylase compare
SMc01929 -1.0 -1.7 hypothetical protein compare
SM_b20387 -0.9 -1.5 transcriptional regulator compare
SM_b21687 -0.9 -1.8 hypothetical protein compare
SMc01337 -0.9 -1.1 hypothetical protein compare
SMc02861 -0.9 -2.3 phosphate transporter compare
SMc02614 -0.9 -2.9 hypothetical protein compare
SMc03128 -0.9 -3.2 ABC transporter permease compare
SMa0249 -0.9 -1.5 TRAP-type small permease component compare
SMc00514 -0.9 -2.5 monooxygenase compare
SMc00012 -0.9 -1.1 cytochrome C oxidase assembly protein compare
SMc03124 -0.9 -2.8 periplasmic binding ABC transporter protein compare
SMc01235 -0.9 -6.0 excinuclease ABC subunit A compare
SMc00580 -0.9 -3.5 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02121 -0.9 -0.7 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02077 -0.9 -2.3 exodeoxyribonuclease III protein compare
SMc00189 -0.9 -2.2 cytochrome C1 protein compare
SMc02510 -0.8 -0.8 ferric uptake regulation protein compare
SM_b21212 -0.8 -1.7 hypothetical protein compare
SMc00602 -0.8 -3.1 excinuclease ABC subunit C compare
SMa1095 -0.8 -0.7 hypothetical protein compare
SMa0738 -0.8 -2.4 CspA6 cold shock protein transcriptional regulator compare
SMc01877 -0.8 -3.8 DNA repair protein compare
SM_b20357 -0.8 -1.8 histidine kinase compare
SMc01258 -0.8 -3.5 hypothetical protein compare
SMc01206 -0.8 -1.1 queuine tRNA-ribosyltransferase compare
SMc01144 -0.8 -1.8 ribonuclease PH compare
SMc03070 -0.8 -4.5 glucose-6-phosphate 1-dehydrogenase compare
SMa0314 -0.8 -2.0 hypothetical protein compare
SMc03795 -0.8 -1.2 isopropylmalate isomerase small subunit compare
SMc00166 -0.8 -1.5 oxidoreductase NAD protein compare
SMc01146 -0.8 -1.1 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc02114 -0.8 -2.2 hypothetical protein compare
SMc01969 -0.8 -3.4 hypothetical protein compare
SM_b22001 -0.8 -1.2 hypothetical protein compare
SM_b20889 -0.8 -3.1 hypothetical protein compare
SMc01360 -0.8 -2.1 aspartate carbamoyltransferase catalytic subunit compare
SMc04090 -0.8 -2.2 sun protein compare
SMc02697 -0.8 -1.4 hypothetical protein compare
SMa1201 -0.7 -1.3 hypothetical protein compare
SMc00334 -0.7 -1.3 cytidylate kinase compare
SMa1323 -0.7 -1.5 Transcription regulator compare
SMc02451 -0.7 -1.5 hypothetical protein compare
SMc03100 -0.7 -1.1 hypothetical protein compare
SMc00557 -0.7 -3.5 alanine racemase compare
SMc04189 -0.7 -1.6 hypothetical protein compare
SM_b20450 -0.7 -4.7 regulatory protein compare
SMc01347 -0.7 -2.0 hypothetical protein compare
SM_b20822 -0.7 -3.0 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SMc00760 -0.7 -2.9 recombinase A compare
SMc00565 -0.7 -1.2 50S ribosomal protein L9 compare
SMc03186 -0.7 -2.1 transcriptional regulator compare
SMc03876 -0.7 -2.2 HEAT shock-like protein compare
SM_b20452 -0.7 -1.6 hypothetical protein compare
SM_b21441 -0.7 -1.3 inosine-5'-monophosphate dehydrogenase compare
SM_b20909 -0.7 -1.5 hypothetical protein compare
SMc00667 -0.7 -1.6 hypothetical protein compare
SMc02868 -0.7 -3.0 multidrug efflux system protein compare
SMc01468 -0.7 -1.3 chemotaxis protein compare
SMc00712 -0.7 -1.2 hypothetical protein compare
SMc04191 -0.7 -2.7 hypothetical protein compare
SMc00963 -0.7 -2.0 hypothetical protein compare
SMc03774 -0.7 -1.9 hypothetical protein compare
SM_b20221 -0.7 -2.1 epoxide hydrolase compare
SMc01605 -0.6 -3.3 periplasmic binding ABC transporter protein compare
SMc03773 -0.6 -3.9 hypothetical protein compare
SM_b20075 -0.6 -1.3 hypothetical protein compare
SMc00941 -0.6 -1.0 hypothetical protein compare
SM_b20547 -0.6 -1.5 hypothetical protein compare
SMa0728 -0.6 -1.9 hypothetical protein compare
SMc03184 -0.6 -0.9 PH adaptation potassium efflux system G transmembrane protein compare
SM_b20880 -0.6 -3.6 ATP-dependent RNA helicase compare
SMc01178 -0.6 -1.1 multidrug transmembrane resistance signal peptide protein compare
SM_b21531 -0.6 -3.0 hypothetical protein compare
SMc02155 -0.6 -4.6 hypothetical protein compare
SM_b21633 -0.6 -0.8 enoyl-CoA hydratase compare
SMc01853 -0.6 -3.1 hypothetical protein compare
SMc04453 -0.6 -0.9 hypothetical protein compare
SMa2081 -0.6 -2.8 ABC transporter ATP-binding protein compare
SMc01933 -0.6 -1.1 hypothetical protein compare
SMc03785 -0.6 -1.4 dinucleoside polyphosphate hydrolase compare
SMc01606 -0.6 -2.8 permease compare
SMc04174 -0.6 -1.1 signal peptide protein compare
SMc00085 -0.6 -2.1 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc02886 -0.6 -1.4 signal peptide protein compare
SMa0112 -0.6 -1.4 hypothetical protein compare
SMc00684 -0.6 -1.8 hypothetical protein compare
SMc03801 -0.6 -1.4 thioredoxin protein compare
SMc04186 -0.6 -2.3 hypothetical protein compare
SMc00556 -0.6 -2.5 DNA repair protein RadA compare
SMc03996 -0.6 -2.2 thiamine-phosphate pyrophosphorylase compare
SMc01187 -0.6 -1.1 rare lipoprotein A compare
SMa1310 -0.6 -2.4 VirB7-like protein compare
SMc01607 -0.6 -4.0 permease compare
SMc02856 -0.6 -3.7 penicillin-binding protein compare
SM_b20657 -0.6 -1.6 hypothetical protein compare
SMc02435 -0.6 -1.0 methyltransferase compare
SMc00981 -0.6 -3.2 ferredoxin protein compare
SMc01709 -0.6 -2.2 signal peptide protein compare
SM_b21026 -0.6 -1.8 exopeptide compare
SMc00859 -0.6 -1.5 hypothetical protein compare
SMc00796 -0.6 -1.9 hypothetical protein compare
SMc03844 -0.6 -1.6 hypothetical protein compare
SMc03836 -0.6 -1.1 acyl-CoA thioesterase i protein compare
SM_b21138 -0.6 -2.4 amino acid ABC transporter ATP-binding protein compare
SMc04393 -0.6 -3.2 ABC transporter ATP-binding protein compare
SMc02906 -0.6 -0.6 hypothetical protein compare
SMa1101 -0.6 -0.8 hypothetical protein compare
SMc02827 -0.6 -2.1 hypothetical protein compare
SMc00959 -0.6 -1.0 hypothetical protein compare
SMc04436 -0.6 -2.2 hypothetical protein compare
SM_b20655 -0.6 -1.3 hypothetical protein compare
SMc02980 -0.6 -0.9 hypothetical protein compare
SMc02044 -0.6 -2.2 hypothetical protein compare
SMa0326 -0.6 -1.2 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc02154 -0.6 -4.6 hypothetical protein compare
SMc02719 -0.5 -0.6 transposase compare
SM_b20005 -0.5 -1.3 glutathione S-transferase compare
SMc02582 -0.5 -1.4 hypothetical protein compare
SMc02658 -0.5 -1.7 hypothetical protein compare
SMa1704 -0.5 -2.2 hypothetical protein compare
SMa0171 -0.5 -2.1 hypothetical protein compare
SMc01700 -0.5 -2.4 peptidyl-prolyl cis-trans isomerase A compare
SMc00806 -0.5 -1.4 hypothetical protein compare
SMc02978 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in temperature experiments