Experiment set2IT067 for Methanococcus maripaludis JJ

Compare to:

Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.0 9.9 hypothetical protein compare
MMJJ_RS03360 +0.9 1.8 hypothetical protein compare
MMJJ_RS06975 +0.6 2.2 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08775 +0.6 4.8 PfkB family carbohydrate kinase compare
MMJJ_RS09295 +0.6 0.7 hypothetical protein compare
MMJJ_RS07030 +0.5 4.8 hypothetical protein compare
MMJJ_RS05740 +0.5 4.0 archaellar assembly protein FlaJ compare
MMJJ_RS05870 +0.5 1.8 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS06540 +0.4 1.6 DUF2120 domain-containing protein compare
MMJJ_RS06740 +0.4 2.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS07280 +0.4 3.0 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS03345 +0.4 2.4 hypothetical protein compare
MMJJ_RS05760 +0.4 3.6 flagellar protein F compare
MMJJ_RS05750 +0.4 3.3 flagellar accessory protein FlaH compare
MMJJ_RS00420 +0.4 2.7 CBS domain-containing protein compare
MMJJ_RS05510 +0.4 2.9 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS01785 +0.4 0.6 50S ribosomal protein L14e compare
MMJJ_RS03410 +0.4 1.7 hypothetical protein compare
MMJJ_RS08765 +0.4 3.0 glycosyltransferase family 9 protein compare
MMJJ_RS08730 +0.4 2.9 glycosyltransferase family 4 protein compare
MMJJ_RS03725 +0.3 1.4 sulfurtransferase TusA family protein compare
MMJJ_RS07690 +0.3 2.6 glycosyltransferase family 4 protein compare
MMJJ_RS05820 +0.3 1.8 DUF2304 domain-containing protein compare
MMJJ_RS04480 +0.3 1.1 hypothetical protein compare
MMJJ_RS06665 +0.3 1.8 DUF3236 domain-containing protein compare
MMJJ_RS06810 +0.3 2.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS05505 +0.3 3.1 hypothetical protein compare
MMJJ_RS07680 +0.3 2.3 glucose-6-phosphate isomerase compare
MMJJ_RS05755 +0.3 2.7 flagellar protein G compare
MMJJ_RS05745 +0.3 2.6 type II/IV secretion system ATPase subunit compare
MMJJ_RS04585 +0.3 2.4 phenylacetate--CoA ligase compare
MMJJ_RS03850 +0.3 1.9 nucleoside-diphosphate kinase compare
MMJJ_RS08780 +0.3 1.8 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS07175 +0.3 2.7 DEAD/DEAH box helicase compare
MMJJ_RS08580 +0.3 1.9 YkgJ family cysteine cluster protein compare
MMJJ_RS08750 +0.3 2.6 glycosyltransferase compare
MMJJ_RS01590 +0.3 0.8 adenine phosphoribosyltransferase compare
MMJJ_RS08515 +0.3 1.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06455 +0.3 2.3 YeeE/YedE family protein compare
MMJJ_RS06465 +0.3 2.1 hypothetical protein compare
MMJJ_RS07210 +0.3 2.2 AmmeMemoRadiSam system protein B compare
MMJJ_RS06520 +0.3 2.2 TldD/PmbA family protein compare
MMJJ_RS06505 +0.3 1.8 prephenate dehydratase compare
MMJJ_RS03045 +0.3 2.1 hypothetical protein compare
MMJJ_RS06710 +0.3 2.3 TldD/PmbA family protein compare
MMJJ_RS06130 +0.3 1.4 hypothetical protein compare
MMJJ_RS08040 +0.3 2.0 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06470 +0.3 1.8 tripartite tricarboxylate transporter permease compare
MMJJ_RS08490 +0.3 0.9 rubrerythrin family protein compare
MMJJ_RS07010 +0.3 1.6 preprotein translocase subunit Sec61beta compare
MMJJ_RS06680 +0.3 1.3 DUF366 family protein compare
MMJJ_RS08705 +0.3 1.8 AEC family transporter compare
MMJJ_RS01855 +0.3 1.9 MBL fold metallo-hydrolase compare
MMJJ_RS00400 +0.3 1.4 tautomerase family protein compare
MMJJ_RS03070 +0.2 1.3 MetS family NSS transporter small subunit compare
MMJJ_RS01125 +0.2 1.3 hypothetical protein compare
MMJJ_RS03835 +0.2 1.0 DUF504 domain-containing protein compare
MMJJ_RS05900 +0.2 2.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS03380 +0.2 1.1 hypothetical protein compare
MMJJ_RS04545 +0.2 0.9 PadR family transcriptional regulator compare
MMJJ_RS06720 +0.2 1.7 mechanosensitive ion channel family protein compare
MMJJ_RS07235 +0.2 2.0 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07595 +0.2 1.3 hypothetical protein compare
MMJJ_RS06770 +0.2 2.0 hypothetical protein compare
MMJJ_RS06500 +0.2 1.6 class I SAM-dependent methyltransferase compare
MMJJ_RS05790 +0.2 1.7 flagellin compare
MMJJ_RS06190 +0.2 2.1 7-cyano-7-deazaguanine synthase compare
MMJJ_RS01100 +0.2 0.5 helix-turn-helix domain-containing protein compare
MMJJ_RS06430 +0.2 1.6 haloacid dehalogenase compare
MMJJ_RS08760 +0.2 1.7 glycosyltransferase family 9 protein compare
MMJJ_RS01060 +0.2 1.5 ABC transporter ATP-binding protein compare
MMJJ_RS08785 +0.2 1.4 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS00500 +0.2 1.2 GNAT family N-acetyltransferase compare
MMJJ_RS07835 +0.2 1.8 UPF0489 family protein compare
MMJJ_RS01395 +0.2 1.0 DUF1894 domain-containing protein compare
MMJJ_RS04625 +0.2 1.7 SLC13 family permease compare
MMJJ_RS06120 +0.2 1.7 DUF4013 domain-containing protein compare
MMJJ_RS03375 +0.2 1.6 hypothetical protein compare
MMJJ_RS07450 +0.2 1.4 hypothetical protein compare
MMJJ_RS05980 +0.2 1.6 DUF5400 domain-containing protein compare
MMJJ_RS06585 +0.2 1.5 alanine racemase compare
MMJJ_RS08195 +0.2 1.2 DUF4186 domain-containing protein compare
MMJJ_RS05925 +0.2 1.5 DUF2099 family protein compare
MMJJ_RS09325 +0.2 1.4 hypothetical protein compare
MMJJ_RS07380 +0.2 1.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS02880 +0.2 1.6 hypothetical protein compare
MMJJ_RS05115 +0.2 1.0 P-II family nitrogen regulator compare
MMJJ_RS08370 +0.2 1.0 hypothetical protein compare
MMJJ_RS05365 +0.2 1.3 DUF2798 domain-containing protein compare
MMJJ_RS07740 +0.2 1.4 DUF2334 domain-containing protein compare
MMJJ_RS08365 +0.2 1.1 DsrE family protein compare
MMJJ_RS02180 +0.2 1.0 DHH family phosphoesterase compare
MMJJ_RS07225 +0.2 1.5 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS07240 +0.2 1.7 MBL fold metallo-hydrolase compare
MMJJ_RS09205 +0.2 1.2 hypothetical protein compare
MMJJ_RS06800 +0.2 1.2 prefoldin subunit alpha compare
MMJJ_RS01140 +0.2 1.2 helix-turn-helix domain-containing protein compare
MMJJ_RS06735 +0.2 1.5 cobalt ECF transporter T component CbiQ compare
MMJJ_RS07610 +0.2 1.2 DUF2119 domain-containing protein compare
MMJJ_RS07850 +0.2 1.8 ATP-binding protein compare
MMJJ_RS09370 +0.2 0.8 heavy-metal-associated domain-containing protein compare
MMJJ_RS03605 +0.2 1.0 TIGR00297 family protein compare
MMJJ_RS01380 +0.2 1.3 DUF1890 domain-containing protein compare
MMJJ_RS00465 +0.2 1.5 selenouridine synthase SelU-like subunit compare
MMJJ_RS08345 +0.2 1.5 flavodoxin family protein compare
MMJJ_RS06280 +0.2 1.5 hypothetical protein compare
MMJJ_RS05585 +0.2 1.3 hypothetical protein compare
MMJJ_RS07830 +0.2 1.2 DUF1786 domain-containing protein compare
MMJJ_RS06205 +0.2 1.3 EamA family transporter compare
MMJJ_RS04375 +0.2 0.7 hypothetical protein compare
MMJJ_RS06440 +0.2 1.2 DUF4870 domain-containing protein compare
MMJJ_RS03510 +0.2 1.1 acyl-CoA dehydratase activase compare
MMJJ_RS04165 +0.2 1.3 sodium:solute symporter compare
MMJJ_RS08125 +0.2 1.3 DNA double-strand break repair nuclease NurA compare
MMJJ_RS08445 +0.2 0.9 cell division ATPase MinD compare
MMJJ_RS07385 +0.2 1.2 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS07855 +0.2 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS03750 +0.2 1.2 rubredoxin compare
MMJJ_RS04510 +0.2 1.4 hypothetical protein compare
MMJJ_RS07260 +0.2 1.2 PspC domain-containing protein compare
MMJJ_RS05685 +0.2 1.0 class III signal peptide-containing protein compare
MMJJ_RS06580 +0.2 1.3 alanine dehydrogenase compare
MMJJ_RS07795 +0.2 0.9 cupin domain-containing protein compare
MMJJ_RS01155 +0.2 0.9 hypothetical protein compare
MMJJ_RS07495 +0.2 1.2 4Fe-4S binding protein compare
MMJJ_RS02975 +0.2 1.0 NAD(P)H-dependent oxidoreductase compare
MMJJ_RS04215 +0.2 1.4 DMT family transporter compare
MMJJ_RS03545 +0.2 1.2 flagella protein F compare
MMJJ_RS08310 +0.2 1.0 ZIP family metal transporter compare
MMJJ_RS04785 +0.2 1.0 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS00870 +0.2 1.1 F420-nonreducing hydrogenase compare
MMJJ_RS04070 +0.2 1.4 DUF2341 domain-containing protein compare
MMJJ_RS07445 +0.2 1.1 RlmF-related methyltransferase compare
MMJJ_RS08400 +0.2 0.5 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS08630 +0.2 1.0 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS08720 +0.2 1.3 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS06550 +0.2 1.2 ABC transporter permease compare
MMJJ_RS07685 +0.1 1.3 glycogen/starch synthase compare
MMJJ_RS00335 +0.1 0.8 chemotaxis protein CheW compare
MMJJ_RS05335 +0.1 1.0 heavy metal-binding domain-containing protein compare
MMJJ_RS08295 +0.1 1.3 iron ABC transporter substrate-binding protein compare
MMJJ_RS09065 +0.1 0.9 hypothetical protein compare
MMJJ_RS04500 +0.1 1.1 hypothetical protein compare
MMJJ_RS04635 +0.1 0.7 DUF367 family protein compare
MMJJ_RS03015 +0.1 1.2 Ig-like domain-containing protein compare
MMJJ_RS00510 +0.1 1.2 DEAD/DEAH box helicase compare
MMJJ_RS05530 +0.1 0.7 roadblock/LC7 domain-containing protein compare
MMJJ_RS02965 +0.1 0.8 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS06160 +0.1 1.1 stage II sporulation protein M compare
MMJJ_RS06790 +0.1 1.2 nucleotidyltransferase family protein compare
MMJJ_RS05915 +0.1 0.5 multiprotein bridging factor aMBF1 compare
MMJJ_RS08715 +0.1 0.8 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS07205 +0.1 0.8 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS06055 +0.1 0.9 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS05495 +0.1 1.0 MinD/ParA family protein compare
MMJJ_RS01175 +0.1 1.1 hypothetical protein compare
MMJJ_RS02845 +0.1 1.1 hypothetical protein compare
MMJJ_RS06290 +0.1 1.0 DUF749 domain-containing protein compare
MMJJ_RS03450 +0.1 0.7 hypothetical protein compare
MMJJ_RS09155 +0.1 1.1 RluA family pseudouridine synthase compare
MMJJ_RS09060 +0.1 1.0 hypothetical protein compare
MMJJ_RS00780 +0.1 1.0 M48 family metallopeptidase compare
MMJJ_RS08470 +0.1 0.5 ferredoxin family protein compare
MMJJ_RS08830 +0.1 0.7 hypothetical protein compare
MMJJ_RS06105 +0.1 0.9 DUF99 family protein compare
MMJJ_RS00695 +0.1 1.0 P-II family nitrogen regulator compare
MMJJ_RS05200 +0.1 1.1 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS07220 +0.1 1.1 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS00555 +0.1 0.8 hypothetical protein compare
MMJJ_RS06445 +0.1 1.1 hypothetical protein compare
MMJJ_RS07270 +0.1 0.9 ribonuclease HII compare
MMJJ_RS06115 +0.1 1.0 pyruvate kinase compare
MMJJ_RS09255 +0.1 0.5 hypothetical protein compare
MMJJ_RS07435 +0.1 1.1 SMC family ATPase compare
MMJJ_RS00630 +0.1 1.0 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS02165 +0.1 0.9 ABC transporter substrate-binding protein compare
MMJJ_RS03525 +0.1 1.0 2-hydroxyacyl-CoA dehydratase family protein compare
MMJJ_RS07675 +0.1 1.0 ADP-specific phosphofructokinase compare
MMJJ_RS07440 +0.1 0.9 metallophosphoesterase compare
MMJJ_RS05385 +0.1 1.0 hypothetical protein compare
MMJJ_RS02345 +0.1 0.9 ATP-binding protein compare
MMJJ_RS08930 +0.1 0.9 5'/3'-nucleotidase SurE compare
MMJJ_RS00415 +0.1 0.7 DedA family protein compare
MMJJ_RS09390 +0.1 0.4 hypothetical protein compare
MMJJ_RS02230 +0.1 1.0 hypothetical protein compare
MMJJ_RS04750 +0.1 0.8 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS01265 +0.1 0.5 cupin domain-containing protein compare
MMJJ_RS01530 +0.1 0.4 YwbE family protein compare
MMJJ_RS06210 +0.1 0.7 hypothetical protein compare
MMJJ_RS08655 +0.1 0.9 phospholipase D-like domain-containing protein compare
MMJJ_RS07775 +0.1 0.6 fluoride efflux transporter CrcB compare
MMJJ_RS07215 +0.1 1.0 TIGR00341 family protein compare
MMJJ_RS07965 +0.1 0.5 hypothetical protein compare
MMJJ_RS02125 +0.1 0.4 hypothetical protein compare
MMJJ_RS02080 +0.1 0.9 AMP-binding protein compare
MMJJ_RS01095 +0.1 0.8 site-specific integrase compare
MMJJ_RS05975 +0.1 0.8 sulfurtransferase TusA family protein compare
MMJJ_RS08420 +0.1 1.0 uroporphyrinogen decarboxylase family protein compare
MMJJ_RS02065 +0.1 0.9 S-layer protein compare
MMJJ_RS03370 +0.1 0.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms