Experiment set2IT066 for Sinorhizobium meliloti 1021

Compare to:

LB, pH8

200 most important genes:

  gene name fitness t score description  
SMc01440 -5.6 -6.9 hydrolase serine protease transmembrane protein compare
SMc00334 -5.3 -2.7 cytidylate kinase compare
SMc02144 -5.1 -7.7 phosphate ABC transporter permease compare
SMc02147 -5.1 -7.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02142 -4.8 -7.5 phosphate transporter ATP-binding protein compare
SMc02641 -4.5 -6.4 UDP-glucose 6-dehydrogenase compare
SMc03839 -4.5 -2.3 hypothetical protein compare
SMc02909 -4.4 -3.6 transglycosylase transmembrane protein compare
SMc02140 -4.4 -1.8 phosphate regulon transcriptional regulatory protein compare
SMc03967 -4.3 -2.2 Holliday junction resolvase compare
SMc02510 -4.1 -1.3 ferric uptake regulation protein compare
SMc01147 -4.1 -4.9 coproporphyrinogen III oxidase compare
SMc02640 -3.9 -5.4 UDP-glucuronic acid epimerase compare
SMc02850 -3.8 -5.0 DNA polymerase I compare
SMc02495 -3.8 -1.6 translaldolase compare
SMc02853 -3.8 -6.4 hypothetical protein compare
SMc03184 -3.6 -1.6 PH adaptation potassium efflux system G transmembrane protein compare
SMc02713 -3.6 -2.1 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc01929 -3.5 -4.3 hypothetical protein compare
SMc01441 -3.5 -8.0 membrane bound protease compare
SMc01220 -3.4 -7.2 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02753 -3.4 -1.8 PTS system transporter subunit IIA compare
SMc00914 -3.4 -7.2 oxidoreductase compare
SMc01845 -3.4 -3.2 transglycosylase transmembrane protein compare
SMc01208 -3.3 -4.0 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02582 -3.2 -5.3 hypothetical protein compare
SMc03763 -3.1 -4.7 cytosine-specific methyltransferase compare
SMc00963 -3.0 -4.8 hypothetical protein compare
SMc03181 -3.0 -10.5 monovalent cation/H+ antiporter subunit D compare
SMc03179 -3.0 -16.4 monovalent cation/H+ antiporter subunit A compare
SMc03180 -2.9 -5.8 monovalent cation/H+ antiporter subunit C compare
SMc02145 -2.8 -1.2 signal peptide protein compare
SM_b21580 -2.8 -2.6 hypothetical protein compare
SM_b20563 -2.6 -3.5 hypothetical protein compare
SMc00067 -2.6 -9.5 outer-membranne lipoprotein compare
SMc00088 -2.6 -2.4 hypothetical protein compare
SMc03849 -2.4 -1.5 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc03183 -2.4 -4.9 monovalent cation/H+ antiporter subunit F compare
SMc02868 -2.4 -5.3 multidrug efflux system protein compare
SMc01221 -2.3 -10.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc04169 -2.3 -12.3 transcriptional regulator compare
SMc02636 -2.3 -3.9 hypothetical protein compare
SMc02867 -2.3 -4.4 multidrug-efflux system transmembrane protein compare
SMc03182 -2.3 -7.2 pH adaptation potassium efflux system E transmembrane protein compare
SMc02143 -2.2 -4.1 phosphate ABC transporter permease compare
SMc02451 -2.2 -1.9 hypothetical protein compare
SMc01716 -2.1 -7.3 sensor histidine kinase transmembrane protein compare
SMc00060 -2.1 -7.4 hypothetical protein compare
SMc00053 -2.1 -1.2 monovalent cation/H+ antiporter subunit C compare
SMc02363 -2.0 -3.9 cytochrome C-type biogenesis transmembrane protein compare
SMc02102 -2.0 -4.9 hypothetical protein compare
SMc04121 -2.0 -1.7 uracil phosphoribosyltransferase compare
SMc02484 -1.9 -6.3 amino acid efflux transmembrane protein compare
SMc00579 -1.9 -6.9 dimethyladenosine transferase compare
SMc04209 -1.9 -8.8 hypothetical protein compare
SMc00355 -1.9 -5.1 hypothetical protein compare
SMc00404 -1.9 -1.1 hypothetical protein compare
SM_b20773 -1.9 -3.9 GntR family transcriptional regulator compare
SMc01187 -1.9 -2.7 rare lipoprotein A compare
SMc02234 -1.9 -2.0 hypothetical protein compare
SMc00353 -1.8 -2.3 transmembrane protein compare
SMc02634 -1.8 -10.5 hypothetical protein compare
SMc02114 -1.8 -5.3 hypothetical protein compare
SMc00496 -1.8 -1.5 hypothetical protein compare
SM_b20595 -1.8 -4.2 cell division protein FtsK compare
SMc00987 -1.8 -2.8 hypothetical protein compare
SMc02685 -1.7 -4.2 hypothetical protein compare
SMc00928 -1.7 -1.7 signal peptide protein compare
SMc01183 -1.7 -1.9 LexA repressor compare
SMc02778 -1.7 -1.1 hydroxyacid aldolase compare
SMc01969 -1.7 -5.9 hypothetical protein compare
SMc01258 -1.7 -5.4 hypothetical protein compare
SMc02229 -1.7 -9.5 acyl-CoA dehydrogenase compare
SMc04330 -1.6 -2.7 trimethylamine methyltransferase compare
SMc00815 -1.6 -1.1 inosine 5'-monophosphate dehydrogenase compare
SMc00492 -1.6 -1.0 hypothetical protein compare
SMc02425 -1.5 -4.2 transcriptional regulator compare
SMc01347 -1.5 -4.5 hypothetical protein compare
SMc00948 -1.5 -6.9 glutamine synthetase compare
SM_b20823 -1.5 -7.4 cell surface saccharide synthesis protein compare
SMc03773 -1.5 -4.4 hypothetical protein compare
SM_b21452 -1.5 -3.1 hypothetical protein compare
SMc02856 -1.5 -9.4 penicillin-binding protein compare
SMc03140 -1.5 -4.9 transcriptional regulator compare
SMc01019 -1.5 -6.9 hypothetical protein compare
SMc01146 -1.5 -2.8 deoxyribonucleotide triphosphate pyrophosphatase compare
SM_b20758 -1.5 -2.1 ArsR family transcriptional regulator compare
SMc04340 -1.5 -7.5 oxidoreductase compare
SMc00602 -1.5 -4.8 excinuclease ABC subunit C compare
SMc00150 -1.4 -11.8 hypothetical protein compare
SM_b20806 -1.4 -4.3 hypothetical protein compare
SMc01700 -1.4 -5.5 peptidyl-prolyl cis-trans isomerase A compare
SMc04339 -1.4 -7.7 hypothetical protein compare
SMc01457 -1.4 -7.0 transport transmembrane protein compare
SMc01568 -1.4 -1.1 hypothetical protein compare
SM_b20803 -1.4 -3.6 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMc01516 -1.4 -2.9 hypothetical protein compare
SMc04024 -1.4 -5.7 membrane-bound lytic murein transglycosylase compare
SMa0734 -1.3 -1.9 hypothetical protein compare
SMc01012 -1.3 -1.0 hypothetical protein compare
SMc00331 -1.3 -2.3 hypothetical protein compare
SMc03889 -1.3 -2.5 transporter compare
SMc04337 -1.3 -4.3 hypothetical protein compare
SM_b21523 -1.3 -1.7 cell division inhibitor protein compare
SMc02786 -1.2 -2.7 translocase transmembrane protein compare
SMc02639 -1.2 -1.7 transcriptional regulator compare
SMc03123 -1.2 -8.5 transcriptional regulator compare
SMc01007 -1.2 -1.7 hypothetical protein compare
SMc01857 -1.2 -2.8 cell division protein MraZ compare
SMc02368 -1.2 -7.7 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
SMc02460 -1.2 -7.2 hypothetical protein compare
SMc04091 -1.2 -5.4 heat shock protein HtpX compare
SMc02121 -1.2 -1.3 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc01127 -1.2 -3.7 hypothetical protein compare
SMc00484 -1.2 -3.5 hypothetical protein compare
SMc00288 -1.2 -6.2 signal peptide protein compare
SMc00555 -1.2 -1.1 colicin V production transmembrane protein compare
SM_b21524 -1.1 -2.4 septum formation inhibitor compare
SMc02077 -1.1 -2.5 exodeoxyribonuclease III protein compare
SMc01235 -1.1 -6.8 excinuclease ABC subunit A compare
SM_b20509 -1.1 -2.1 transcriptional regulator compare
SMc02573 -1.1 -2.4 hypothetical protein compare
SMc02435 -1.1 -1.6 methyltransferase compare
SMc01119 -1.1 -1.5 hypothetical protein compare
SMc02280 -1.1 -1.5 hypothetical protein compare
SMc00856 -1.1 -1.1 hypothetical protein compare
SMc02266 -1.1 -1.5 hypothetical protein compare
SMc02238 -1.1 -1.6 hypothetical protein compare
SMc01877 -1.1 -3.5 DNA repair protein compare
SM_b21035 -1.1 -3.8 hypothetical protein compare
SMc02512 -1.1 -3.2 permease transmembrane protein compare
SMc02683 -1.1 -1.6 hypothetical protein compare
SM_b20258 -1.1 -2.2 transcriptional regulator compare
SMc03242 -1.0 -2.0 GTP-binding protein compare
SM_b21679 -1.0 -0.9 hypothetical protein compare
SMc02894 -1.0 -2.0 hypothetical protein compare
SMc02141 -1.0 -1.1 phosphate transporter PhoU compare
SM_b21296 -1.0 -2.0 hypothetical protein compare
SMc01853 -1.0 -3.0 hypothetical protein compare
SM_b20876 -1.0 -3.0 hypothetical protein compare
SM_b21417 -1.0 -5.9 CDP-glucose 4,6-dehydratase compare
SMc03100 -1.0 -1.3 hypothetical protein compare
SMc01200 -1.0 -3.9 hypothetical protein compare
SMc02787 -1.0 -2.6 hypothetical protein compare
SMc00147 -1.0 -2.4 hypothetical protein compare
SMc00689 -1.0 -3.4 lipoprotein compare
SMc00396 -1.0 -1.8 hypothetical protein compare
SMc00760 -1.0 -2.8 recombinase A compare
SMc01458 -1.0 -5.4 transporter compare
SMc01461 -1.0 -3.7 DNA helicase II protein compare
SMc01782 -1.0 -5.5 hypothetical protein compare
SMc00470 -1.0 -2.6 hypothetical protein compare
SMc04212 -1.0 -4.5 sensor histidine kinase transmembrane protein compare
SMc03850 -1.0 -1.2 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc03774 -1.0 -1.7 hypothetical protein compare
SMc00970 -0.9 -2.4 exodeoxyribonuclease VII small subunit compare
SMc03091 -0.9 -3.6 arginase compare
SMa0905 -0.9 -1.0 hypothetical protein compare
SMc02228 -0.9 -3.5 acetyl-CoA acetyltransferase compare
SM_b21418 -0.9 -4.3 NDP-hexose 3-C-methyltransferase compare
SMc02714 -0.9 -1.0 hypothetical protein compare
SMc00239 -0.9 -0.7 hypothetical protein compare
SMc00296 -0.9 -4.8 POLY3-hydroxybutyrate polymerase compare
SMc01770 -0.9 -1.4 serine hydroxymethyltransferase compare
SMc00356 -0.9 -4.8 lysyl-tRNA synthetase compare
SMc00461 -0.9 -1.2 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc01609 -0.9 -4.5 riboflavin synthase subunit beta compare
SM_b20897 -0.9 -1.4 hypothetical protein compare
SMc00658 -0.9 -5.2 transcriptional regulator compare
SMc00184 -0.9 -2.3 tRNA/rRNA methyltransferase compare
SMa1240 -0.9 -0.8 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc00802 -0.8 -0.6 hypothetical protein compare
SMc01665 -0.8 -5.4 hypothetical protein compare
SMc02485 -0.8 -1.0 signal peptide protein compare
SMa1323 -0.8 -2.1 Transcription regulator compare
SMc01368 -0.8 -2.4 transport transmembrane protein compare
SMc02260 -0.8 -1.5 ABC transporter ATP-binding protein compare
SMc01651 -0.8 -1.9 transcriptional regulator compare
SMc02306 -0.8 -1.0 hypothetical protein compare
SMa0992 -0.8 -2.1 hypothetical protein compare
SMc01001 -0.8 -4.4 hypothetical protein compare
SMc03060 -0.8 -5.3 transcriptional regulator compare
SMa1466 -0.8 -2.9 ABC transporter ATP-binding protein compare
SMc02979 -0.8 -3.4 hypothetical protein compare
SMa1056 -0.8 -0.7 transcriptional regulator compare
SMc02976 -0.8 -3.2 transcriptional regulator compare
SMc02470 -0.8 -4.4 transcriptional regulator compare
SMc02799 -0.8 -2.0 16S rRNA methyltransferase GidB compare
SMc00194 -0.8 -2.0 hypothetical protein compare
SMa2091 -0.8 -2.0 hypothetical protein compare
SM_b20942 -0.8 -2.1 UDP glucose 4-epimerase compare
SMc02724 -0.8 -1.6 hypothetical protein compare
SMa1526 -0.8 -2.5 NuoE2 NADH I chain E compare
SMc01039 -0.8 -1.7 hypothetical protein compare
SMa0789 -0.8 -1.6 GntR family transcriptional regulator compare
SMc00982 -0.8 -3.3 dioxygenase compare
SMc04351 -0.8 -4.2 transmembrane ATP-binding ABC transporter protein compare
SMa1442 -0.8 -2.6 GntR family transcriptional regulator compare
SMc02232 -0.8 -1.4 hypothetical protein compare
SMc03878 -0.8 -2.5 acetoacetyl-CoA reductase compare


Specific Phenotypes

For 28 genes in this experiment