Experiment set2IT065 for Sinorhizobium meliloti 1021

Compare to:

LB, pH8

200 most important genes:

  gene name fitness t score description  
SMc02641 -5.3 -6.3 UDP-glucose 6-dehydrogenase compare
SMc01220 -5.3 -6.3 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01208 -5.3 -4.5 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02147 -4.9 -8.1 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01845 -4.6 -3.5 transglycosylase transmembrane protein compare
SMc03839 -4.5 -2.4 hypothetical protein compare
SMc02142 -4.4 -6.5 phosphate transporter ATP-binding protein compare
SMc02140 -4.4 -1.8 phosphate regulon transcriptional regulatory protein compare
SMc03967 -4.3 -2.3 Holliday junction resolvase compare
SMc02867 -4.2 -4.1 multidrug-efflux system transmembrane protein compare
SMc02144 -3.9 -6.8 phosphate ABC transporter permease compare
SMc02853 -3.9 -7.0 hypothetical protein compare
SMc01441 -3.8 -7.1 membrane bound protease compare
SMc02451 -3.7 -2.4 hypothetical protein compare
SMc01183 -3.6 -1.4 LexA repressor compare
SMc02685 -3.6 -4.8 hypothetical protein compare
SMc01440 -3.6 -7.8 hydrolase serine protease transmembrane protein compare
SMc02640 -3.6 -6.3 UDP-glucuronic acid epimerase compare
SM_b20563 -3.5 -4.4 hypothetical protein compare
SMc02850 -3.5 -5.8 DNA polymerase I compare
SMc00334 -3.4 -2.2 cytidylate kinase compare
SMc02909 -3.4 -3.0 transglycosylase transmembrane protein compare
SMc01147 -3.3 -4.4 coproporphyrinogen III oxidase compare
SMc00963 -3.2 -6.7 hypothetical protein compare
SMc03180 -3.0 -5.9 monovalent cation/H+ antiporter subunit C compare
SMc02753 -3.0 -1.9 PTS system transporter subunit IIA compare
SMc01929 -3.0 -4.6 hypothetical protein compare
SMc02714 -2.8 -1.8 hypothetical protein compare
SMc03184 -2.8 -1.8 PH adaptation potassium efflux system G transmembrane protein compare
SMc02145 -2.8 -1.2 signal peptide protein compare
SMc02636 -2.8 -5.2 hypothetical protein compare
SMc02114 -2.8 -4.9 hypothetical protein compare
SMc00914 -2.8 -6.2 oxidoreductase compare
SMc02077 -2.7 -3.9 exodeoxyribonuclease III protein compare
SMc02495 -2.7 -1.4 translaldolase compare
SMc03179 -2.7 -14.7 monovalent cation/H+ antiporter subunit A compare
SM_b20758 -2.5 -3.3 ArsR family transcriptional regulator compare
SMc03181 -2.5 -8.5 monovalent cation/H+ antiporter subunit D compare
SMc03182 -2.5 -6.7 pH adaptation potassium efflux system E transmembrane protein compare
SMc04169 -2.5 -14.5 transcriptional regulator compare
SMc03763 -2.5 -4.4 cytosine-specific methyltransferase compare
SMc00856 -2.4 -1.7 hypothetical protein compare
SMc01221 -2.4 -8.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01716 -2.2 -7.5 sensor histidine kinase transmembrane protein compare
SMc00067 -2.2 -10.4 outer-membranne lipoprotein compare
SMc00353 -2.2 -2.9 transmembrane protein compare
SM_b20773 -2.1 -4.9 GntR family transcriptional regulator compare
SMc01007 -2.1 -2.7 hypothetical protein compare
SMc03183 -2.1 -5.6 monovalent cation/H+ antiporter subunit F compare
SMc00053 -2.1 -1.3 monovalent cation/H+ antiporter subunit C compare
SMc02582 -2.0 -5.2 hypothetical protein compare
SMc01258 -2.0 -5.5 hypothetical protein compare
SMc03850 -2.0 -1.9 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02143 -2.0 -3.1 phosphate ABC transporter permease compare
SM_b20595 -2.0 -4.7 cell division protein FtsK compare
SMc02868 -1.9 -3.7 multidrug efflux system protein compare
SMc04330 -1.9 -3.1 trimethylamine methyltransferase compare
SMc00331 -1.9 -2.7 hypothetical protein compare
SMc00579 -1.9 -6.0 dimethyladenosine transferase compare
SMc00461 -1.9 -2.0 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc02363 -1.8 -3.3 cytochrome C-type biogenesis transmembrane protein compare
SMc01457 -1.8 -7.3 transport transmembrane protein compare
SMc02639 -1.8 -2.2 transcriptional regulator compare
SM_b20320 -1.8 -1.7 TRAP-type large permease component compare
SMc02484 -1.7 -7.5 amino acid efflux transmembrane protein compare
SMc00948 -1.7 -8.2 glutamine synthetase compare
SMc00928 -1.7 -1.7 signal peptide protein compare
SMc00060 -1.7 -4.8 hypothetical protein compare
SMc00355 -1.7 -4.3 hypothetical protein compare
SMc02266 -1.7 -2.0 hypothetical protein compare
SMc02713 -1.7 -2.1 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc03746 -1.7 -2.4 hypothetical protein compare
SMc01700 -1.6 -5.1 peptidyl-prolyl cis-trans isomerase A compare
SMc04212 -1.6 -7.2 sensor histidine kinase transmembrane protein compare
SMc02229 -1.6 -8.5 acyl-CoA dehydrogenase compare
SMa1770 -1.6 -1.4 hypothetical protein compare
SMc03899 -1.6 -1.0 hypothetical protein compare
SMc02505 -1.6 -2.0 hypothetical protein compare
SMc01770 -1.6 -2.4 serine hydroxymethyltransferase compare
SMa0360 -1.6 -2.0 transposase compare
SMc04121 -1.6 -2.0 uracil phosphoribosyltransferase compare
SMc00602 -1.6 -5.8 excinuclease ABC subunit C compare
SMc02102 -1.6 -4.3 hypothetical protein compare
SMc02634 -1.6 -9.6 hypothetical protein compare
SMc04024 -1.6 -8.1 membrane-bound lytic murein transglycosylase compare
SMc01969 -1.5 -5.6 hypothetical protein compare
SMa1323 -1.5 -2.2 Transcription regulator compare
SMc01857 -1.5 -2.9 cell division protein MraZ compare
SM_b21347 -1.5 -2.2 pectin degradation protein compare
SMc02510 -1.5 -0.9 ferric uptake regulation protein compare
SMc03773 -1.5 -5.7 hypothetical protein compare
SMc00150 -1.5 -12.3 hypothetical protein compare
SMc04340 -1.5 -9.0 oxidoreductase compare
SMc01187 -1.5 -2.0 rare lipoprotein A compare
SMc02435 -1.5 -2.4 methyltransferase compare
SMc01568 -1.5 -1.5 hypothetical protein compare
SMc04209 -1.4 -5.4 hypothetical protein compare
SMc01019 -1.4 -8.6 hypothetical protein compare
SMc02856 -1.4 -8.2 penicillin-binding protein compare
SMc03878 -1.4 -3.7 acetoacetyl-CoA reductase compare
SM_b20075 -1.4 -1.9 hypothetical protein compare
SMc00569 -1.4 -1.8 hypothetical protein compare
SMc01853 -1.4 -4.0 hypothetical protein compare
SMa1095 -1.3 -0.9 hypothetical protein compare
SMc00241 -1.3 -1.3 transcriptional regulator compare
SM_b21523 -1.3 -2.2 cell division inhibitor protein compare
SMc02425 -1.3 -4.0 transcriptional regulator compare
SMc04339 -1.3 -7.9 hypothetical protein compare
SMc03123 -1.3 -9.2 transcriptional regulator compare
SMa0833 -1.3 -1.2 hypothetical protein compare
SMc00987 -1.3 -1.5 hypothetical protein compare
SMc01782 -1.3 -4.8 hypothetical protein compare
SMc02234 -1.3 -2.4 hypothetical protein compare
SMa1639 -1.3 -1.3 hypothetical protein compare
SMc00404 -1.3 -0.9 hypothetical protein compare
SMc00088 -1.3 -1.3 hypothetical protein compare
SMc02227 -1.2 -5.1 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc01461 -1.2 -4.0 DNA helicase II protein compare
SMc01235 -1.2 -7.9 excinuclease ABC subunit A compare
SM_b20258 -1.2 -3.0 transcriptional regulator compare
SMc00496 -1.2 -1.2 hypothetical protein compare
SMc01458 -1.2 -6.1 transporter compare
SM_b20806 -1.2 -2.8 hypothetical protein compare
SMc01939 -1.2 -0.9 urease subunit beta compare
SMc01361 -1.2 -4.7 dihydroorotase compare
SMc00650 -1.2 -1.3 hypothetical protein compare
SMc00691 -1.2 -2.9 site-specific tyrosine recombinase XerD compare
SMc04213 -1.2 -1.6 diacylglycerol kinase compare
SMc02544 -1.1 -0.9 hypothetical protein compare
SMc02786 -1.1 -2.8 translocase transmembrane protein compare
SMa0543 -1.1 -1.2 hypothetical protein compare
SMc03140 -1.1 -3.5 transcriptional regulator compare
SMc04337 -1.1 -3.3 hypothetical protein compare
SMc00484 -1.1 -4.4 hypothetical protein compare
SMc02228 -1.1 -5.4 acetyl-CoA acetyltransferase compare
SMc02573 -1.1 -1.9 hypothetical protein compare
SMc01368 -1.1 -3.0 transport transmembrane protein compare
SMc01001 -1.1 -5.4 hypothetical protein compare
SMc01119 -1.1 -1.3 hypothetical protein compare
SMc00356 -1.1 -3.7 lysyl-tRNA synthetase compare
SMc04296 -1.0 -0.7 cell division protein FtsZ compare
SMc02683 -1.0 -2.0 hypothetical protein compare
SM_b20805 -1.0 -5.9 glycosyltransferase compare
SMc03774 -1.0 -1.4 hypothetical protein compare
SMc00970 -1.0 -1.8 exodeoxyribonuclease VII small subunit compare
SMc02460 -1.0 -6.3 hypothetical protein compare
SM_b20803 -1.0 -2.5 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMc00288 -1.0 -5.1 signal peptide protein compare
SMc00815 -1.0 -1.7 inosine 5'-monophosphate dehydrogenase compare
SMc04091 -1.0 -4.7 heat shock protein HtpX compare
SMc00557 -1.0 -3.8 alanine racemase compare
SM_b20043 -1.0 -4.9 hypothetical protein compare
SMc02368 -1.0 -6.4 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
SMa1924 -1.0 -0.8 hypothetical protein compare
SMc01877 -1.0 -4.6 DNA repair protein compare
SMc00760 -0.9 -2.5 recombinase A compare
SMc01347 -0.9 -3.6 hypothetical protein compare
SMc00800 -0.9 -1.2 hypothetical protein compare
SM_b20942 -0.9 -2.7 UDP glucose 4-epimerase compare
SMc02232 -0.9 -1.3 hypothetical protein compare
SMc02172 -0.9 -4.4 transcriptional regulator compare
SM_b20509 -0.9 -1.5 transcriptional regulator compare
SMc03889 -0.9 -2.7 transporter compare
SMc03060 -0.9 -4.6 transcriptional regulator compare
SMc01127 -0.9 -2.9 hypothetical protein compare
SMc00296 -0.9 -4.7 POLY3-hydroxybutyrate polymerase compare
SMa5010 -0.9 -1.0 hypothetical protein compare
SMc00492 -0.9 -0.7 hypothetical protein compare
SMc01093 -0.9 -1.4 esterase compare
SM_b21428 -0.9 -3.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SMc04231 -0.8 -4.1 excinuclease ABC subunit B compare
SM_b21418 -0.8 -5.2 NDP-hexose 3-C-methyltransferase compare
SM_b20823 -0.8 -4.0 cell surface saccharide synthesis protein compare
SMc01280 -0.8 -1.3 protease compare
SM_b21482 -0.8 -1.3 hypothetical protein compare
SMa0112 -0.8 -1.5 hypothetical protein compare
SMc00012 -0.8 -1.0 cytochrome C oxidase assembly protein compare
SM_b21663 -0.8 -2.3 hypothetical protein compare
SMc04351 -0.8 -3.3 transmembrane ATP-binding ABC transporter protein compare
SMc03053 -0.8 -1.0 flagellar biosynthesis protein FliQ compare
SMc02894 -0.8 -1.5 hypothetical protein compare
SMc02787 -0.8 -1.7 hypothetical protein compare
SMa1413 -0.8 -1.2 hypothetical protein compare
SMc01653 -0.8 -1.8 ABC transporter ATP-binding protein compare
SMc00047 -0.8 -2.1 beta-lactamase signal peptide protein compare
SMc02719 -0.8 -0.7 transposase compare
SM_b21425 -0.8 -5.0 hypothetical protein compare
SMc03776 -0.8 -2.3 gamma-glutamyl kinase compare
SM_b20261 -0.8 -2.1 malate dehydrogenase compare
SMc02141 -0.8 -0.8 phosphate transporter PhoU compare
SMc03134 -0.8 -2.2 hypothetical protein compare
SMc00689 -0.8 -2.9 lipoprotein compare
SMc02799 -0.8 -1.3 16S rRNA methyltransferase GidB compare
SM_b21035 -0.8 -2.0 hypothetical protein compare
SM_b21102 -0.8 -5.4 transcriptional regulator compare
SMc01516 -0.8 -1.7 hypothetical protein compare
SMc02061 -0.8 -3.8 biotin-regulated protein compare
SMa0674 -0.8 -1.1 hypothetical protein compare
SMc04311 -0.8 -4.2 hypothetical protein compare
SMa0789 -0.8 -1.8 GntR family transcriptional regulator compare


Specific Phenotypes

For 28 genes in this experiment