Experiment set2IT064 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.5 5.0 hypothetical protein compare
MMJJ_RS03360 +0.5 1.2 hypothetical protein compare
MMJJ_RS04720 +0.5 0.8 IMP dehydrogenase compare
MMJJ_RS06275 +0.5 3.3 hypothetical protein compare
MMJJ_RS05135 +0.5 1.1 50S ribosomal protein L18Ae compare
MMJJ_RS09295 +0.5 0.7 hypothetical protein compare
MMJJ_RS06430 +0.4 3.0 haloacid dehalogenase compare
MMJJ_RS09380 +0.4 1.8 hypothetical protein compare
MMJJ_RS01405 +0.4 0.5 proline--tRNA ligase compare
MMJJ_RS03185 +0.4 0.7 alanine--tRNA ligase compare
MMJJ_RS00420 +0.4 2.4 CBS domain-containing protein compare
MMJJ_RS01590 +0.4 0.4 adenine phosphoribosyltransferase compare
MMJJ_RS01010 +0.4 3.5 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06465 +0.4 2.6 hypothetical protein compare
MMJJ_RS06585 +0.3 2.4 alanine racemase compare
MMJJ_RS05190 +0.3 2.0 gamma carbonic anhydrase family protein compare
MMJJ_RS01210 +0.3 0.7 hypothetical protein compare
MMJJ_RS06680 +0.3 2.1 DUF366 family protein compare
MMJJ_RS06210 +0.3 1.9 hypothetical protein compare
MMJJ_RS06130 +0.3 1.4 hypothetical protein compare
MMJJ_RS06580 +0.3 2.4 alanine dehydrogenase compare
MMJJ_RS05510 +0.3 2.1 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS04585 +0.3 2.1 phenylacetate--CoA ligase compare
MMJJ_RS04300 +0.3 2.0 hypothetical protein compare
MMJJ_RS00785 +0.3 1.0 hypothetical protein compare
MMJJ_RS01615 +0.3 1.3 MoaD/ThiS family protein compare
MMJJ_RS08365 +0.3 1.5 DsrE family protein compare
MMJJ_RS05870 +0.3 1.0 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS06455 +0.3 2.2 YeeE/YedE family protein compare
MMJJ_RS07645 +0.3 2.1 selenium-binding protein compare
MMJJ_RS08705 +0.3 2.4 AEC family transporter compare
MMJJ_RS06800 +0.3 1.6 prefoldin subunit alpha compare
MMJJ_RS06445 +0.3 2.6 hypothetical protein compare
MMJJ_RS09370 +0.3 0.8 heavy-metal-associated domain-containing protein compare
MMJJ_RS08730 +0.3 2.3 glycosyltransferase family 4 protein compare
MMJJ_RS08040 +0.3 2.2 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS03410 +0.3 1.1 hypothetical protein compare
MMJJ_RS07210 +0.3 2.2 AmmeMemoRadiSam system protein B compare
MMJJ_RS04525 +0.3 1.5 hypothetical protein compare
MMJJ_RS07690 +0.3 2.0 glycosyltransferase family 4 protein compare
MMJJ_RS06950 +0.3 2.0 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06520 +0.3 2.0 TldD/PmbA family protein compare
MMJJ_RS06720 +0.3 1.9 mechanosensitive ion channel family protein compare
MMJJ_RS07255 +0.3 2.3 hypothetical protein compare
MMJJ_RS07965 +0.3 1.5 hypothetical protein compare
MMJJ_RS06770 +0.3 2.2 hypothetical protein compare
MMJJ_RS05970 +0.3 1.0 MJ0307 family thioredoxin compare
MMJJ_RS07795 +0.3 1.4 cupin domain-containing protein compare
MMJJ_RS00115 +0.2 1.5 hypothetical protein compare
MMJJ_RS09330 +0.2 1.6 hypothetical protein compare
MMJJ_RS00150 +0.2 1.4 DUF2180 family protein compare
MMJJ_RS09325 +0.2 1.4 hypothetical protein compare
MMJJ_RS06470 +0.2 1.8 tripartite tricarboxylate transporter permease compare
MMJJ_RS06105 +0.2 1.8 DUF99 family protein compare
MMJJ_RS04270 +0.2 1.3 DUF364 domain-containing protein compare
MMJJ_RS06810 +0.2 1.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS05505 +0.2 2.2 hypothetical protein compare
MMJJ_RS07450 +0.2 1.5 hypothetical protein compare
MMJJ_RS06295 +0.2 1.6 DUF2096 family protein compare
MMJJ_RS04055 +0.2 1.3 hypothetical protein compare
MMJJ_RS04245 +0.2 1.5 flavoprotein compare
MMJJ_RS07610 +0.2 1.6 DUF2119 domain-containing protein compare
MMJJ_RS06080 +0.2 1.9 serine/threonine protein kinase compare
MMJJ_RS06550 +0.2 1.7 ABC transporter permease compare
MMJJ_RS04215 +0.2 1.9 DMT family transporter compare
MMJJ_RS03510 +0.2 1.5 acyl-CoA dehydratase activase compare
MMJJ_RS02000 +0.2 1.1 AzlD domain-containing protein compare
MMJJ_RS03690 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS05100 +0.2 1.5 P-II family nitrogen regulator compare
MMJJ_RS05250 +0.2 1.4 HDIG domain-containing protein compare
MMJJ_RS00930 +0.2 1.2 queuosine precursor transporter compare
MMJJ_RS03750 +0.2 1.5 rubredoxin compare
MMJJ_RS06765 +0.2 1.8 hypothetical protein compare
MMJJ_RS00525 +0.2 0.8 Dabb family protein compare
MMJJ_RS06740 +0.2 1.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS06045 +0.2 1.5 hypothetical protein compare
MMJJ_RS01155 +0.2 1.0 hypothetical protein compare
MMJJ_RS09010 +0.2 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS03370 +0.2 0.9 hypothetical protein compare
MMJJ_RS01125 +0.2 1.2 hypothetical protein compare
MMJJ_RS07915 +0.2 1.1 CBS domain-containing protein compare
MMJJ_RS07685 +0.2 1.7 glycogen/starch synthase compare
MMJJ_RS07765 +0.2 1.1 DMT family protein compare
MMJJ_RS06120 +0.2 1.3 DUF4013 domain-containing protein compare
MMJJ_RS06755 +0.2 1.6 diadenylate cyclase compare
MMJJ_RS03045 +0.2 1.4 hypothetical protein compare
MMJJ_RS01650 +0.2 1.7 acetolactate synthase large subunit compare
MMJJ_RS06555 +0.2 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS06945 +0.2 1.4 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS05915 +0.2 0.6 multiprotein bridging factor aMBF1 compare
MMJJ_RS04175 +0.2 1.1 hypothetical protein compare
MMJJ_RS05695 +0.2 1.3 class III signal peptide-containing protein compare
MMJJ_RS07650 +0.2 1.5 formate/nitrite transporter family protein compare
MMJJ_RS07835 +0.2 1.4 UPF0489 family protein compare
MMJJ_RS04180 +0.2 0.3 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS07240 +0.2 1.5 MBL fold metallo-hydrolase compare
MMJJ_RS09265 +0.2 0.6 hypothetical protein compare
MMJJ_RS07665 +0.2 1.6 formate dehydrogenase subunit alpha compare
MMJJ_RS07480 +0.2 1.4 FAD-dependent oxidoreductase compare
MMJJ_RS05730 +0.2 1.5 TIM barrel protein compare
MMJJ_RS05975 +0.2 1.2 sulfurtransferase TusA family protein compare
MMJJ_RS07865 +0.2 1.2 zinc ribbon domain-containing protein compare
MMJJ_RS06710 +0.2 1.4 TldD/PmbA family protein compare
MMJJ_RS07660 +0.2 1.0 carbonic anhydrase compare
MMJJ_RS06190 +0.2 1.4 7-cyano-7-deazaguanine synthase compare
MMJJ_RS07440 +0.2 1.2 metallophosphoesterase compare
MMJJ_RS04405 +0.2 1.1 hypothetical protein compare
MMJJ_RS01355 +0.2 0.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01515 +0.2 0.8 DUF2178 domain-containing protein compare
MMJJ_RS06960 +0.2 1.5 CAP domain-containing protein compare
MMJJ_RS04165 +0.2 1.3 sodium:solute symporter compare
MMJJ_RS09215 +0.2 1.4 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06205 +0.2 1.2 EamA family transporter compare
MMJJ_RS06450 +0.2 1.2 DUF3343 domain-containing protein compare
MMJJ_RS09390 +0.2 0.7 hypothetical protein compare
MMJJ_RS01520 +0.2 0.5 helix-turn-helix transcriptional regulator compare
MMJJ_RS07815 +0.2 1.3 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS03380 +0.2 0.8 hypothetical protein compare
MMJJ_RS01760 +0.1 1.0 N-acetyltransferase compare
MMJJ_RS09130 +0.1 0.3 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06440 +0.1 1.1 DUF4870 domain-containing protein compare
MMJJ_RS04870 +0.1 0.4 tRNA-Asp compare
MMJJ_RS05980 +0.1 1.0 DUF5400 domain-containing protein compare
MMJJ_RS04090 +0.1 1.3 hypothetical protein compare
MMJJ_RS08280 +0.1 1.2 radical SAM protein compare
MMJJ_RS06640 +0.1 1.1 YfcE family phosphodiesterase compare
MMJJ_RS03415 +0.1 0.9 hypothetical protein compare
MMJJ_RS07590 +0.1 1.0 flap endonuclease-1 compare
MMJJ_RS01950 +0.1 1.1 hypothetical protein compare
MMJJ_RS07445 +0.1 1.0 RlmF-related methyltransferase compare
MMJJ_RS06235 +0.1 1.2 IGHMBP2 family helicase compare
MMJJ_RS07215 +0.1 1.2 TIGR00341 family protein compare
MMJJ_RS01640 +0.1 1.2 zinc ribbon domain-containing protein compare
MMJJ_RS07910 +0.1 0.9 CBS domain-containing protein compare
MMJJ_RS08295 +0.1 1.1 iron ABC transporter substrate-binding protein compare
MMJJ_RS06460 +0.1 0.9 cytochrome c compare
MMJJ_RS06100 +0.1 1.0 rubrerythrin compare
MMJJ_RS01305 +0.1 1.1 ACT domain-containing protein compare
MMJJ_RS08370 +0.1 0.8 hypothetical protein compare
MMJJ_RS08345 +0.1 1.1 flavodoxin family protein compare
MMJJ_RS03350 +0.1 0.3 hypothetical protein compare
MMJJ_RS05240 +0.1 1.1 type II secretion system F family protein compare
MMJJ_RS06505 +0.1 0.6 prephenate dehydratase compare
MMJJ_RS09365 +0.1 0.7 hypothetical protein compare
MMJJ_RS08690 +0.1 0.9 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS07805 +0.1 0.8 ferredoxin family protein compare
MMJJ_RS08050 +0.1 1.1 ABC transporter substrate-binding protein compare
MMJJ_RS00605 +0.1 0.8 ABC transporter permease compare
MMJJ_RS05890 +0.1 1.0 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS06290 +0.1 0.9 DUF749 domain-containing protein compare
MMJJ_RS07035 +0.1 0.2 glycosyl transferase compare
MMJJ_RS05035 +0.1 0.8 4Fe-4S binding protein compare
MMJJ_RS08750 +0.1 1.0 glycosyltransferase compare
MMJJ_RS07385 +0.1 0.8 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS02085 +0.1 0.9 hypothetical protein compare
MMJJ_RS08075 +0.1 1.0 ATP-dependent DNA helicase compare
MMJJ_RS02135 +0.1 1.0 TatD family hydrolase compare
MMJJ_RS07270 +0.1 0.8 ribonuclease HII compare
MMJJ_RS02245 +0.1 0.8 DUF432 domain-containing protein compare
MMJJ_RS03385 +0.1 0.8 hypothetical protein compare
MMJJ_RS06280 +0.1 0.9 hypothetical protein compare
MMJJ_RS07500 +0.1 0.9 hypothetical protein compare
MMJJ_RS05760 +0.1 0.9 flagellar protein F compare
MMJJ_RS03440 +0.1 0.9 hypothetical protein compare
MMJJ_RS05700 +0.1 0.8 metallophosphoesterase compare
MMJJ_RS06135 +0.1 0.9 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS02080 +0.1 1.0 AMP-binding protein compare
MMJJ_RS08515 +0.1 0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS08025 +0.1 0.6 hypothetical protein compare
MMJJ_RS07620 +0.1 0.8 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS00540 +0.1 0.7 hypothetical protein compare
MMJJ_RS04480 +0.1 0.3 hypothetical protein compare
MMJJ_RS06590 +0.1 0.8 sodium:alanine symporter family protein compare
MMJJ_RS03850 +0.1 0.6 nucleoside-diphosphate kinase compare
MMJJ_RS07825 +0.1 0.6 YciI family protein compare
MMJJ_RS06160 +0.1 0.8 stage II sporulation protein M compare
MMJJ_RS04845 +0.1 0.9 ABC transporter substrate-binding protein compare
MMJJ_RS08400 +0.1 0.4 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS08125 +0.1 0.8 DNA double-strand break repair nuclease NurA compare
MMJJ_RS07420 +0.1 0.7 protease complex subunit PrcB family protein compare
MMJJ_RS08350 +0.1 0.9 heavy metal translocating P-type ATPase compare
MMJJ_RS01250 +0.1 0.7 hypothetical protein compare
MMJJ_RS07810 +0.1 0.8 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS05955 +0.1 0.9 radical SAM protein compare
MMJJ_RS05525 +0.1 0.7 GTP-binding protein compare
MMJJ_RS01065 +0.1 0.7 DUF1700 domain-containing protein compare
MMJJ_RS00510 +0.1 0.8 DEAD/DEAH box helicase compare
MMJJ_RS08165 +0.1 0.7 thermonuclease family protein compare
MMJJ_RS07595 +0.1 0.5 hypothetical protein compare
MMJJ_RS08860 +0.1 0.7 Rrf2 family transcriptional regulator compare
MMJJ_RS05750 +0.1 0.8 flagellar accessory protein FlaH compare
MMJJ_RS03485 +0.1 0.8 radical SAM protein compare
MMJJ_RS07860 +0.1 0.6 hypothetical protein compare
MMJJ_RS07855 +0.1 0.7 YkgJ family cysteine cluster protein compare
MMJJ_RS07820 +0.1 0.8 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS00315 +0.1 0.7 methyl-accepting chemotaxis protein compare
MMJJ_RS04305 +0.1 0.9 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS03740 +0.1 0.7 thiamine pyrophosphate-dependent enzyme compare
MMJJ_RS05925 +0.1 0.6 DUF2099 family protein compare
MMJJ_RS05090 +0.1 0.6 MGMT family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms