Experiment set2IT062 for Ralstonia sp. UNC404CL21Col

Compare to:

Glycerol carbon source

200 most important genes:

  gene name fitness t score description  
ABZR87_RS08630 -7.8 -13.0 dihydroorotase compare
ABZR87_RS01810 -7.0 -4.8 glutamate 5-kinase compare
ABZR87_RS07360 -6.6 -14.9 threonine ammonia-lyase, biosynthetic compare
ABZR87_RS16170 -6.6 -6.4 argininosuccinate lyase compare
ABZR87_RS14505 -6.6 -6.4 phosphoribosylanthranilate isomerase compare
ABZR87_RS13790 -6.3 -11.4 chorismate synthase compare
ABZR87_RS02570 -6.1 -25.1 glutamate synthase-related protein compare
ABZR87_RS02565 -6.1 -6.0 glutamate synthase subunit beta compare
ABZR87_RS14535 -6.1 -5.9 3-isopropylmalate dehydratase small subunit compare
ABZR87_RS14530 -6.1 -5.9 3-isopropylmalate dehydrogenase compare
ABZR87_RS14500 -6.0 -15.2 tryptophan synthase subunit beta compare
ABZR87_RS02160 -5.9 -8.1 indole-3-glycerol phosphate synthase TrpC compare
ABZR87_RS22910 -5.9 -4.1 6-phosphogluconolactonase compare
ABZR87_RS09465 -5.9 -8.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR87_RS02145 -5.7 -3.9 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS00210 -5.7 -8.7 nitrite/sulfite reductase compare
ABZR87_RS16140 -5.6 -18.4 phosphoenolpyruvate carboxylase compare
ABZR87_RS22970 -5.6 -13.3 cystathionine gamma-synthase family protein compare
ABZR87_RS08625 -5.6 -3.8 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS14540 -5.6 -10.0 3-isopropylmalate dehydratase large subunit compare
ABZR87_RS09445 -5.5 -14.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR87_RS02640 -5.5 -15.8 diaminopimelate decarboxylase compare
ABZR87_RS09450 -5.4 -11.5 prephenate dehydratase compare
ABZR87_RS02155 -5.4 -10.3 anthranilate phosphoribosyltransferase compare
ABZR87_RS07380 -5.4 -15.5 FAD/FMN-binding oxidoreductase compare
ABZR87_RS02595 -5.3 -9.1 shikimate kinase compare
ABZR87_RS02590 -5.2 -11.8 3-dehydroquinate synthase compare
ABZR87_RS03020 -5.2 -20.0 glycerol-3-phosphate dehydrogenase compare
ABZR87_RS00185 -5.1 -3.5 uroporphyrinogen-III C-methyltransferase compare
ABZR87_RS05100 -5.1 -8.7 RNA polymerase-binding protein DksA compare
ABZR87_RS00190 -5.0 -13.3 sulfate adenylyltransferase subunit 1 compare
ABZR87_RS05200 -4.9 -17.6 homoserine O-acetyltransferase compare
ABZR87_RS00835 -4.9 -6.7 argininosuccinate synthase compare
ABZR87_RS14490 -4.9 -12.2 tryptophan synthase subunit alpha compare
ABZR87_RS00200 -4.9 -6.2 phosphoadenylyl-sulfate reductase compare
ABZR87_RS09935 -4.8 -5.7 amino acid aminotransferase compare
ABZR87_RS13250 -4.8 -4.5 phosphoserine phosphatase SerB compare
ABZR87_RS22920 -4.7 -7.2 phosphogluconate dehydratase compare
ABZR87_RS02140 -4.5 -18.9 anthranilate synthase component I compare
ABZR87_RS14950 -4.5 -4.4 acetolactate synthase small subunit compare
ABZR87_RS00205 -4.5 -3.1 DUF934 domain-containing protein compare
ABZR87_RS12790 -4.3 -5.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS13175 -4.2 -4.1 tRNA-Leu compare
ABZR87_RS05170 -4.2 -5.0 acetylglutamate kinase compare
ABZR87_RS05590 -4.2 -5.7 orotate phosphoribosyltransferase compare
ABZR87_RS04865 -4.1 -6.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS12785 -3.9 -10.5 endopeptidase La compare
ABZR87_RS03055 -3.8 -7.8 glycerol kinase GlpK conserved
ABZR87_RS03050 -3.8 -14.5 ABC transporter substrate-binding protein conserved
ABZR87_RS14955 -3.5 -4.2 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS00285 -3.5 -2.4 acetylornithine transaminase compare
ABZR87_RS11440 -3.5 -7.5 pyridoxal phosphate-dependent aminotransferase compare
ABZR87_RS15440 -3.5 -3.4 ribonuclease G compare
ABZR87_RS14115 -3.5 -12.3 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS00195 -3.4 -3.3 sulfate adenylyltransferase subunit CysD compare
ABZR87_RS22915 -3.3 -13.3 glucose-6-phosphate dehydrogenase compare
ABZR87_RS07665 -3.3 -12.0 aminopeptidase P N-terminal domain-containing protein compare
ABZR87_RS00435 -3.2 -11.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS08700 -3.2 -13.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
ABZR87_RS12795 -3.0 -7.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS07050 -2.9 -3.1 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS09895 -2.8 -3.0 DUF1841 family protein compare
ABZR87_RS09515 -2.7 -2.7 cysteine synthase CysM compare
ABZR87_RS10780 -2.7 -5.6 PD-(D/E)XK nuclease family protein compare
ABZR87_RS02480 -2.6 -1.8 imidazole glycerol phosphate synthase subunit HisH compare
ABZR87_RS16960 -2.6 -6.4 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS08640 -2.5 -7.9 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABZR87_RS07035 -2.5 -10.8 RNase adapter RapZ compare
ABZR87_RS12800 -2.5 -8.2 trigger factor compare
ABZR87_RS16185 -2.4 -3.3 dCTP deaminase compare
ABZR87_RS01110 -2.4 -9.1 3-deoxy-7-phosphoheptulonate synthase AroG compare
ABZR87_RS00220 -2.4 -6.4 CysB family HTH-type transcriptional regulator compare
ABZR87_RS03025 -2.4 -9.3 ABC transporter ATP-binding protein conserved
ABZR87_RS08070 -2.3 -1.9 pyruvate kinase compare
ABZR87_RS10785 -2.3 -6.8 exodeoxyribonuclease V subunit beta compare
ABZR87_RS08695 -2.2 -12.9 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS07675 -2.2 -11.1 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR87_RS07635 -2.1 -3.5 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS16180 -2.1 -3.9 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS01145 -2.0 -3.7 glycolate oxidase subunit GlcE compare
ABZR87_RS06715 -2.0 -3.9 PTS sugar transporter subunit IIA compare
ABZR87_RS08645 -1.9 -1.6 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS03040 -1.9 -6.0 carbohydrate ABC transporter permease conserved
ABZR87_RS11000 -1.9 -8.6 transaldolase compare
ABZR87_RS01135 -1.8 -9.3 FAD-linked oxidase C-terminal domain-containing protein compare
ABZR87_RS00215 -1.8 -4.2 sulfite exporter TauE/SafE family protein compare
ABZR87_RS01150 -1.7 -6.9 glycolate oxidase subunit GlcF compare
ABZR87_RS03035 -1.7 -5.6 sugar ABC transporter permease compare
ABZR87_RS10620 -1.7 -3.5 serine O-acetyltransferase compare
ABZR87_RS07100 -1.6 -5.7 DJ-1/PfpI family protein conserved
ABZR87_RS06495 -1.6 -3.3 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS04995 -1.5 -3.1 DNA topoisomerase III compare
ABZR87_RS01225 -1.5 -3.0 YggS family pyridoxal phosphate-dependent enzyme compare
ABZR87_RS00745 -1.5 -1.4 3-hydroxyacyl-CoA dehydrogenase compare
ABZR87_RS10400 -1.5 -2.9 hypothetical protein compare
ABZR87_RS03030 -1.5 -4.0 ABC transporter ATP-binding protein compare
ABZR87_RS21795 -1.5 -5.8 NUDIX domain-containing protein compare
ABZR87_RS06645 -1.4 -2.0 TlpA disulfide reductase family protein compare
ABZR87_RS01760 -1.4 -1.5 PP0621 family protein compare
ABZR87_RS12425 -1.4 -2.9 ABC transporter ATP-binding protein compare
ABZR87_RS05065 -1.3 -4.1 tyrosine recombinase XerC compare
ABZR87_RS13475 -1.3 -6.0 PAS domain S-box protein compare
ABZR87_RS13300 -1.3 -6.8 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS02385 -1.3 -5.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS14890 -1.3 -1.7 preprotein translocase subunit SecG compare
ABZR87_RS00795 -1.3 -3.1 site-specific tyrosine recombinase XerD compare
ABZR87_RS02375 -1.3 -8.8 cytochrome c1 compare
ABZR87_RS23380 -1.3 -1.9 chemotaxis protein CheW compare
ABZR87_RS11815 -1.3 -7.0 [protein-PII] uridylyltransferase compare
ABZR87_RS07700 -1.2 -1.9 peptidylprolyl isomerase compare
ABZR87_RS06845 -1.2 -6.4 heme o synthase compare
ABZR87_RS11125 -1.2 -4.9 cell division protein ZapE compare
ABZR87_RS06400 -1.2 -8.3 response regulator transcription factor compare
ABZR87_RS16735 -1.1 -9.5 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
ABZR87_RS01645 -1.1 -3.0 type II 3-dehydroquinate dehydratase compare
ABZR87_RS06810 -1.1 -6.3 cytochrome c oxidase assembly protein compare
ABZR87_RS16125 -1.1 -5.6 heme biosynthesis protein HemY compare
ABZR87_RS04945 -1.1 -2.2 DUF4390 domain-containing protein compare
ABZR87_RS03705 -1.1 -1.8 DUF2892 domain-containing protein compare
ABZR87_RS02440 -1.1 -7.7 twin-arginine translocase subunit TatC compare
ABZR87_RS07020 -1.1 -8.1 dynamin-like GTPase family protein compare
ABZR87_RS02445 -1.1 -4.7 Sec-independent protein translocase protein TatB compare
ABZR87_RS02680 -1.0 -7.4 c-type cytochrome compare
ABZR87_RS02655 -1.0 -6.8 anti-sigma factor compare
ABZR87_RS07705 -1.0 -3.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS02380 -1.0 -8.1 cytochrome bc complex cytochrome b subunit compare
ABZR87_RS16730 -1.0 -5.1 2-methylaconitate cis-trans isomerase PrpF compare
ABZR87_RS06385 -1.0 -6.9 CHASE3 domain-containing protein compare
ABZR87_RS01675 -1.0 -1.8 carbohydrate kinase family protein compare
ABZR87_RS17310 -0.9 -4.5 PadR family transcriptional regulator compare
ABZR87_RS10240 -0.9 -2.0 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS05060 -0.9 -3.3 DUF484 family protein compare
ABZR87_RS11940 -0.9 -2.0 SsrA-binding protein SmpB compare
ABZR87_RS10610 -0.9 -1.0 inositol monophosphatase family protein compare
ABZR87_RS14235 -0.9 -4.4 formyltetrahydrofolate deformylase compare
ABZR87_RS22585 -0.9 -1.6 methyl-accepting chemotaxis protein compare
ABZR87_RS07620 -0.9 -2.1 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS06840 -0.9 -4.6 COX15/CtaA family protein compare
ABZR87_RS12345 -0.9 -1.1 dethiobiotin synthase compare
ABZR87_RS14965 -0.9 -2.3 DUF3619 family protein compare
ABZR87_RS06455 -0.9 -2.1 IclR family transcriptional regulator compare
ABZR87_RS00600 -0.8 -2.8 hypothetical protein compare
ABZR87_RS23265 -0.8 -2.2 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS06800 -0.8 -7.0 cytochrome c oxidase subunit I compare
ABZR87_RS01615 -0.8 -1.4 RNB domain-containing ribonuclease compare
ABZR87_RS09955 -0.8 -4.5 LacI family DNA-binding transcriptional regulator compare
ABZR87_RS01800 -0.8 -3.1 RNA pyrophosphohydrolase compare
ABZR87_RS17970 -0.8 -1.6 methyl-accepting chemotaxis protein compare
ABZR87_RS07095 -0.8 -2.0 ribbon-helix-helix domain-containing protein compare
ABZR87_RS09625 -0.8 -5.8 CobD/CbiB family protein compare
ABZR87_RS04940 -0.8 -4.8 PAS domain-containing sensor histidine kinase compare
ABZR87_RS11925 -0.8 -5.4 phosphoenolpyruvate synthase compare
ABZR87_RS02575 -0.7 -2.6 transposase compare
ABZR87_RS06795 -0.7 -5.8 cytochrome c oxidase subunit II compare
ABZR87_RS01035 -0.7 -3.2 histidine utilization repressor compare
ABZR87_RS16130 -0.7 -3.1 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
ABZR87_RS11245 -0.7 -3.8 translational GTPase TypA compare
ABZR87_RS09080 -0.7 -3.2 phage holin family protein compare
ABZR87_RS11375 -0.7 -4.9 inorganic phosphate transporter compare
ABZR87_RS11460 -0.7 -2.5 gephyrin-like molybdotransferase Glp compare
ABZR87_RS17565 -0.7 -1.4 helix-turn-helix transcriptional regulator compare
ABZR87_RS21365 -0.7 -1.1 ligase-associated DNA damage response endonuclease PdeM compare
ABZR87_RS01640 -0.7 -2.5 TlpA disulfide reductase family protein compare
ABZR87_RS10525 -0.7 -1.6 L-threonylcarbamoyladenylate synthase compare
ABZR87_RS09460 -0.7 -2.3 prephenate dehydrogenase compare
ABZR87_RS14665 -0.7 -1.3 histidine phosphatase family protein compare
ABZR87_RS05145 -0.7 -1.2 copper chaperone PCu(A)C compare
ABZR87_RS16655 -0.7 -3.5 GntR family transcriptional regulator compare
ABZR87_RS21245 -0.7 -1.0 1,2-phenylacetyl-CoA epoxidase subunit PaaD compare
ABZR87_RS01685 -0.7 -3.4 histone H1-like DNA-binding protein compare
ABZR87_RS12970 -0.7 -1.3 putative holin compare
ABZR87_RS11435 -0.7 -1.9 Mth938-like domain-containing protein compare
ABZR87_RS16845 -0.7 -0.8 hypothetical protein compare
ABZR87_RS09415 -0.7 -3.6 HAD-IA family hydrolase compare
ABZR87_RS19205 -0.6 -2.1 hypothetical protein compare
ABZR87_RS15505 -0.6 -0.9 DNA polymerase III subunit alpha compare
ABZR87_RS06820 -0.6 -4.0 cytochrome c oxidase subunit 3 compare
ABZR87_RS14575 -0.6 -1.9 GntR family transcriptional regulator compare
ABZR87_RS17440 -0.6 -0.4 (2Fe-2S)-binding protein compare
ABZR87_RS22330 -0.6 -1.9 hypothetical protein compare
ABZR87_RS18170 -0.6 -1.1 hypothetical protein compare
ABZR87_RS01270 -0.6 -3.8 ATP-dependent DNA helicase RecG compare
ABZR87_RS15805 -0.6 -3.6 IclR family transcriptional regulator compare
ABZR87_RS11370 -0.6 -1.6 DUF47 domain-containing protein compare
ABZR87_RS09960 -0.6 -3.9 ABC transporter permease compare
ABZR87_RS08620 -0.6 -1.3 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
ABZR87_RS05495 -0.6 -1.0 carboxymuconolactone decarboxylase family protein compare
ABZR87_RS07470 -0.6 -3.2 TetR/AcrR family transcriptional regulator compare
ABZR87_RS17315 -0.6 -2.8 MarR family transcriptional regulator compare
ABZR87_RS01765 -0.6 -2.2 cytochrome c biogenesis protein CcsA compare
ABZR87_RS23555 -0.6 -1.9 glycosyltransferase family 1 protein compare
ABZR87_RS08610 -0.6 -2.4 YqgE/AlgH family protein compare
ABZR87_RS06695 -0.6 -2.3 P-II family nitrogen regulator compare
ABZR87_RS20440 -0.6 -0.8 F0F1 ATP synthase subunit epsilon compare
ABZR87_RS14970 -0.6 -1.9 DUF3106 domain-containing protein compare
ABZR87_RS17730 -0.6 -3.5 GntR family transcriptional regulator compare
ABZR87_RS07965 -0.6 -2.7 recombinase RecA compare
ABZR87_RS15320 -0.6 -1.2 DUF969 domain-containing protein compare
ABZR87_RS01420 -0.6 -1.0 outer membrane protein assembly factor BamE compare
ABZR87_RS06855 -0.6 -1.4 RNA polymerase sigma factor RpoH compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Glycerol in Ralstonia sp. UNC404CL21Col

For carbon source Glycerol across organisms