Experiment set2IT061 for Methanococcus maripaludis JJ

200 most important genes:

gene	name	fitness	t score	description
MMJJ_RS07000		-0.8	-1.4	TrkH family potassium uptake protein
MMJJ_RS07470		-0.8	-1.4	50S ribosome-binding GTPase
MMJJ_RS09130		-0.7	-1.1	NFYB/HAP3 family transcription factor subunit
MMJJ_RS01870		-0.6	-1.3	methanogenesis marker 15 protein
MMJJ_RS05135		-0.6	-1.1	50S ribosomal protein L18Ae
MMJJ_RS08390		-0.6	-1.8	carboxymuconolactone decarboxylase family protein
MMJJ_RS05590		-0.5	-0.9	homoserine dehydrogenase
MMJJ_RS03245		-0.5	-1.0	UMP kinase
MMJJ_RS03540		-0.5	-3.1	TIGR00289 family protein
MMJJ_RS03115		-0.5	-2.6	sulfopyruvate decarboxylase subunit alpha
MMJJ_RS06480		-0.4	-3.4	hypothetical protein
MMJJ_RS04415		-0.4	-1.6	hypothetical protein
MMJJ_RS06210		-0.4	-2.8	hypothetical protein
MMJJ_RS00885		-0.4	-2.3	coenzyme F420-reducing hydrogenase, FrhD protein
MMJJ_RS06925		-0.4	-1.1	GMP synthase subunit A
MMJJ_RS03095		-0.4	-0.8	bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase
MMJJ_RS05350		-0.4	-2.3	DUF192 domain-containing protein
MMJJ_RS00125		-0.4	-0.9	KEOPS complex subunit Cgi121
MMJJ_RS09265		-0.4	-1.4	hypothetical protein
MMJJ_RS06750		-0.4	-0.6	homoaconitase large subunit
MMJJ_RS05580		-0.3	-2.3	methanogenesis marker 9 domain-containing protein
MMJJ_RS09120		-0.3	-0.7	aspartate kinase
MMJJ_RS08520		-0.3	-0.8	peptidylprolyl isomerase
MMJJ_RS08410		-0.3	-1.0	CBS domain-containing protein
MMJJ_RS02270		-0.3	-1.3	HEPN domain-containing protein
MMJJ_RS02075		-0.3	-1.5	acyl-CoA thioesterase
MMJJ_RS04815		-0.3	-2.2	TIM barrel protein
MMJJ_RS05685		-0.3	-1.8	class III signal peptide-containing protein
MMJJ_RS05530		-0.3	-1.7	roadblock/LC7 domain-containing protein
MMJJ_RS06495		-0.3	-1.5	hypothetical protein
MMJJ_RS03805		-0.3	-0.8	hypothetical protein
MMJJ_RS04970		-0.3	-0.7	DUF655 domain-containing protein
MMJJ_RS06540		-0.3	-1.3	DUF2120 domain-containing protein
MMJJ_RS05115		-0.3	-1.3	P-II family nitrogen regulator
MMJJ_RS06375		-0.3	-1.2	UbiX family flavin prenyltransferase
MMJJ_RS03865		-0.3	-0.6	phosphoribosyl-AMP cyclohydrolase
MMJJ_RS00170		-0.3	-1.9	thioredoxin family protein
MMJJ_RS01085		-0.3	-1.8	hypothetical protein
MMJJ_RS07915		-0.3	-1.6	CBS domain-containing protein
MMJJ_RS03320		-0.3	-1.7	hypothetical protein
MMJJ_RS07500		-0.3	-2.0	hypothetical protein
MMJJ_RS06275		-0.3	-1.5	hypothetical protein
MMJJ_RS06535		-0.3	-2.2	UPF0104 family protein
MMJJ_RS07225		-0.3	-1.7	coenzyme F420 hydrogenase subunit gamma
MMJJ_RS07920		-0.3	-1.9	6-carboxytetrahydropterin synthase QueD
MMJJ_RS03195		-0.2	-1.2	hypothetical protein
MMJJ_RS05140		-0.2	-1.4	DUF2666 domain-containing protein
MMJJ_RS03230		-0.2	-0.9	NAD(P)/FAD-dependent oxidoreductase
MMJJ_RS06830		-0.2	-1.2	4Fe-4S binding protein
MMJJ_RS04620		-0.2	-0.6	homocitrate synthase family protein
MMJJ_RS06235		-0.2	-2.1	IGHMBP2 family helicase
MMJJ_RS04955		-0.2	-1.6	tRNA pseudouridine(54/55) synthase Pus10
MMJJ_RS03200		-0.2	-0.5	uroporphyrinogen-III synthase
MMJJ_RS04340		-0.2	-1.1	hypothetical protein
MMJJ_RS08805		-0.2	-1.5	deoxyuridine 5'-triphosphate nucleotidohydrolase
MMJJ_RS09050		-0.2	-1.0	hypothetical protein
MMJJ_RS02000		-0.2	-1.4	AzlD domain-containing protein
MMJJ_RS09365		-0.2	-0.9	hypothetical protein
MMJJ_RS00115		-0.2	-1.1	hypothetical protein
MMJJ_RS08170		-0.2	-0.7	diaminopimelate decarboxylase
MMJJ_RS01285		-0.2	-1.0	CopG family ribbon-helix-helix protein
MMJJ_RS00670		-0.2	-1.5	nitrogen fixation
MMJJ_RS05160		-0.2	-0.9	RNA-binding protein
MMJJ_RS03905		-0.2	-1.5	ATP-binding cassette domain-containing protein
MMJJ_RS09135		-0.2	-1.3	archaeosine biosynthesis radical SAM protein RaSEA
MMJJ_RS01250		-0.2	-1.3	hypothetical protein
MMJJ_RS00700		-0.2	-1.6	P-II family nitrogen regulator
MMJJ_RS08870		-0.2	-0.4	2-isopropylmalate synthase
MMJJ_RS05440		-0.2	-1.6	serine/threonine protein kinase
MMJJ_RS04105		-0.2	-1.8	prepilin peptidase
MMJJ_RS06950		-0.2	-1.5	4-demethylwyosine synthase TYW1
MMJJ_RS08450		-0.2	-1.5	undecaprenyl-diphosphate phosphatase
MMJJ_RS08380		-0.2	-0.5	hypothetical protein
MMJJ_RS07015		-0.2	-0.3	PFL family protein
MMJJ_RS04290		-0.2	-1.3	hypothetical protein
MMJJ_RS06385		-0.2	-1.0	hypothetical protein
MMJJ_RS00300		-0.2	-1.3	chemotaxis protein CheC
MMJJ_RS07360		-0.2	-0.5	TIGR00269 family protein
MMJJ_RS08810		-0.2	-0.3	DUF4040 domain-containing protein
MMJJ_RS03830		-0.2	-1.4	CBS domain-containing protein
MMJJ_RS04120		-0.2	-1.5	amino acid ABC transporter ATP-binding protein
MMJJ_RS00615		-0.2	-1.0	nucleoside deaminase
MMJJ_RS05560		-0.2	-0.9	30S ribosomal protein S27e
MMJJ_RS05040		-0.2	-1.4	7-carboxy-7-deazaguanine synthase QueE
MMJJ_RS05100		-0.2	-1.5	P-II family nitrogen regulator
MMJJ_RS04545		-0.2	-1.0	PadR family transcriptional regulator
MMJJ_RS00605		-0.2	-1.1	ABC transporter permease
MMJJ_RS01070		-0.2	-0.6	PadR family transcriptional regulator
MMJJ_RS08820		-0.2	-1.2	pyridoxal phosphate-dependent aminotransferase
MMJJ_RS07830		-0.2	-1.3	DUF1786 domain-containing protein
MMJJ_RS02240		-0.2	-0.9	CGGC domain-containing protein
MMJJ_RS07265		-0.2	-1.3	tRNA (adenine-N1)-methyltransferase
MMJJ_RS01770		-0.2	-0.7	TOBE domain-containing protein
MMJJ_RS03495		-0.2	-0.9	hypothetical protein
MMJJ_RS04255		-0.2	-1.5	permease
MMJJ_RS05595		-0.2	-0.5	hypothetical protein
MMJJ_RS07200		-0.2	-1.4	MFS transporter
MMJJ_RS09090		-0.2	-1.0	TetR/AcrR family transcriptional regulator
MMJJ_RS01380		-0.2	-1.2	DUF1890 domain-containing protein
MMJJ_RS02885		-0.2	-0.8	NifB/NifX family molybdenum-iron cluster-binding protein
MMJJ_RS05280		-0.2	-0.2	hypothetical protein
MMJJ_RS04405		-0.2	-1.3	hypothetical protein
MMJJ_RS04215		-0.2	-1.4	DMT family transporter
MMJJ_RS08160		-0.2	-1.0	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
MMJJ_RS05730		-0.2	-1.4	TIM barrel protein
MMJJ_RS00320		-0.2	-0.9	chemotaxis protein CheD
MMJJ_RS08560		-0.2	-1.1	metal-dependent phosphohydrolase
MMJJ_RS07185		-0.2	-0.9	DUF371 domain-containing protein
MMJJ_RS01040		-0.2	-1.1	DUF4013 domain-containing protein
MMJJ_RS00925		-0.2	-0.9	hypothetical protein
MMJJ_RS04855		-0.2	-1.3	ECF transporter S component
MMJJ_RS00875		-0.2	-1.1	hydrogenase iron-sulfur subunit
MMJJ_RS03205		-0.2	-1.1	metallophosphoesterase
MMJJ_RS06080		-0.2	-1.4	serine/threonine protein kinase
MMJJ_RS03920		-0.2	-1.3	nickel pincer cofactor biosynthesis protein LarC
MMJJ_RS07220		-0.2	-1.3	coenzyme F420 hydrogenase subunit beta
MMJJ_RS02900		-0.2	-1.1	hypothetical protein
MMJJ_RS05150		-0.2	-1.2	5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH
MMJJ_RS03375		-0.2	-0.8	hypothetical protein
MMJJ_RS04365		-0.1	-0.9	helix-turn-helix transcriptional regulator
MMJJ_RS01790		-0.1	-1.2	pyridoxamine 5'-phosphate oxidase family protein
MMJJ_RS09010		-0.1	-0.8	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
MMJJ_RS04665		-0.1	-1.1	fumarylacetoacetate hydrolase family protein
MMJJ_RS04770		-0.1	-0.3	formate-dependent phosphoribosylglycinamide formyltransferase
MMJJ_RS02915		-0.1	-1.0	hypothetical protein
MMJJ_RS03595		-0.1	-0.8	hypothetical protein
MMJJ_RS07385		-0.1	-1.2	ribosomal protein S18-alanine N-acetyltransferase
MMJJ_RS02145		-0.1	-1.1	class I SAM-dependent methyltransferase
MMJJ_RS05815		-0.1	-0.8	hypothetical protein
MMJJ_RS01315		-0.1	-0.7	indolepyruvate oxidoreductase subunit beta
MMJJ_RS02860		-0.1	-0.5	site-specific integrase
MMJJ_RS06450		-0.1	-1.1	DUF3343 domain-containing protein
MMJJ_RS07810		-0.1	-1.1	3-methyl-2-oxobutanoate dehydrogenase subunit VorB
MMJJ_RS08455		-0.1	-0.9	tetratricopeptide repeat protein
MMJJ_RS05960		-0.1	-1.1	DUF169 domain-containing protein
MMJJ_RS06675		-0.1	-1.1	TIGR01212 family radical SAM protein
MMJJ_RS07970		-0.1	-0.3	O-phospho-L-seryl-tRNA:Cys-tRNA synthase
MMJJ_RS00220		-0.1	-0.7	UPF0058 family protein
MMJJ_RS03800		-0.1	-1.1	aldolase
MMJJ_RS06500		-0.1	-1.0	class I SAM-dependent methyltransferase
MMJJ_RS03720		-0.1	-0.9	DsrE family protein
MMJJ_RS08635		-0.1	-1.1	hypothetical protein
MMJJ_RS07885		-0.1	-1.1	NERD domain-containing protein
MMJJ_RS04850		-0.1	-0.9	energy-coupling factor transporter transmembrane protein EcfT
MMJJ_RS04420		-0.1	-1.1	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
MMJJ_RS06260		-0.1	-0.8	6-carboxyhexanoate--CoA ligase
MMJJ_RS04210		-0.1	-0.9	DUF434 domain-containing protein
MMJJ_RS05090		-0.1	-0.8	MGMT family protein
MMJJ_RS08215		-0.1	-1.1	radical SAM protein
MMJJ_RS05970		-0.1	-0.4	MJ0307 family thioredoxin
MMJJ_RS06440		-0.1	-1.0	DUF4870 domain-containing protein
MMJJ_RS07860		-0.1	-0.8	hypothetical protein
MMJJ_RS07230		-0.1	-0.9	coenzyme F420-reducing hydrogenase, FrhD protein
MMJJ_RS04220		-0.1	-1.0	helix-turn-helix transcriptional regulator
MMJJ_RS05245		-0.1	-1.0	type II secretion system F family protein
MMJJ_RS04285		-0.1	-1.0	ABC transporter substrate-binding protein
MMJJ_RS04005		-0.1	-1.1	acetate--CoA ligase family protein
MMJJ_RS05250		-0.1	-0.9	HDIG domain-containing protein
MMJJ_RS01955		-0.1	-1.1	hypothetical protein
MMJJ_RS00435		-0.1	-1.0	hypothetical protein
MMJJ_RS04065		-0.1	-1.0	hypothetical protein
MMJJ_RS09370		-0.1	-0.5	heavy-metal-associated domain-containing protein
MMJJ_RS08065		-0.1	-0.2	precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
MMJJ_RS07740		-0.1	-0.8	DUF2334 domain-containing protein
MMJJ_RS03305		-0.1	-1.0	zincin-like metallopeptidase domain-containing protein
MMJJ_RS08165		-0.1	-0.7	thermonuclease family protein
MMJJ_RS04940		-0.1	-0.9	XRE family transcriptional regulator
MMJJ_RS06135		-0.1	-1.0	50S ribosomal protein L11 methyltransferase
MMJJ_RS00095		-0.1	-0.9	permease
MMJJ_RS08255		-0.1	-0.9	GNAT family N-acetyltransferase
MMJJ_RS04535		-0.1	-1.0	coenzyme gamma-F420-2:alpha-L-glutamate ligase
MMJJ_RS03775		-0.1	-0.5	50S ribosomal protein L15e
MMJJ_RS00085		-0.1	-1.0	substrate-binding domain-containing protein
MMJJ_RS01310		-0.1	-0.9	phenylacetate--CoA ligase
MMJJ_RS00955		-0.1	-0.9	flavodoxin
MMJJ_RS04280		-0.1	-0.8	iron ABC transporter permease
MMJJ_RS08045		-0.1	-1.0	transporter substrate-binding domain-containing protein
MMJJ_RS04820		-0.1	-0.8	hypothetical protein
MMJJ_RS01110		-0.1	-0.5	hypothetical protein
MMJJ_RS04870		-0.1	-0.3	tRNA-Asp
MMJJ_RS03440		-0.1	-0.9	hypothetical protein
MMJJ_RS00040		-0.1	-0.7	CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon
MMJJ_RS03575		-0.1	-0.7	NUDIX hydrolase
MMJJ_RS05085		-0.1	-0.9	hypothetical protein
MMJJ_RS03505		-0.1	-0.9	trimeric intracellular cation channel family protein
MMJJ_RS02310		-0.1	-0.9	ABC transporter ATP-binding protein
MMJJ_RS03300		-0.1	-0.8	RNA ligase
MMJJ_RS06430		-0.1	-0.8	haloacid dehalogenase
MMJJ_RS07645		-0.1	-0.7	selenium-binding protein
MMJJ_RS03940		-0.1	-0.8	DMT family transporter
MMJJ_RS08910		-0.1	-0.7	DUF167 domain-containing protein
MMJJ_RS08490		-0.1	-0.5	rubrerythrin family protein
MMJJ_RS05600		-0.1	-0.9	sodium:solute symporter family protein
MMJJ_RS07820		-0.1	-0.9	bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
MMJJ_RS03900		-0.1	-0.8	phosphosulfolactate synthase
MMJJ_RS05665		-0.1	-0.8	hypothetical protein
MMJJ_RS07790		-0.1	-0.9	hypothetical protein
MMJJ_RS07985		-0.1	-0.5	hypothetical protein
MMJJ_RS09360		-0.1	-0.8	hypothetical protein
MMJJ_RS00965		-0.1	-0.7	cyclophilin-like fold protein

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in freezer experiments