Experiment set2IT061 for Methanococcus maripaludis JJ

Compare to:

Collected from freezer stock

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04110 +2.8 8.7 hypothetical protein compare
MMJJ_RS03160 +2.7 15.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS08320 +2.1 4.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS05930 +1.7 3.4 cell division protein SepF compare
MMJJ_RS06380 +1.7 6.0 signal recognition particle protein Srp54 compare
MMJJ_RS07785 +1.5 4.9 fumarate reductase subunit A compare
MMJJ_RS00210 +1.4 3.7 DUF530 family protein compare
MMJJ_RS07275 +1.3 3.2 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS06785 +1.3 7.9 RNA ligase partner protein compare
MMJJ_RS01475 +1.3 2.5 signal recognition particle-docking protein FtsY compare
MMJJ_RS08775 +1.2 9.6 PfkB family carbohydrate kinase compare
MMJJ_RS08250 +1.2 5.9 hydrogenase maturation peptidase HycI compare
MMJJ_RS08765 +1.2 10.1 glycosyltransferase family 9 protein compare
MMJJ_RS03820 +1.2 3.3 hydrogenase formation protein HypD compare
MMJJ_RS00430 +1.1 2.6 ribonuclease Z compare
MMJJ_RS03615 +1.1 3.3 cobalt-precorrin-8 methylmutase compare
MMJJ_RS03995 +1.1 5.5 PHP domain-containing protein compare
MMJJ_RS01355 +1.1 3.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS00360 +1.1 2.9 adenosylhomocysteinase compare
MMJJ_RS05950 +1.1 3.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS05610 +1.1 4.7 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS05225 +1.1 1.5 Gar1/Naf1 family protein compare
MMJJ_RS08615 +1.1 7.4 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS08785 +1.0 7.3 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS06880 +1.0 1.4 EhaG family protein compare
MMJJ_RS03580 +1.0 2.8 TIGR00303 family protein compare
MMJJ_RS05260 +1.0 4.6 ATP-grasp domain-containing protein compare
MMJJ_RS05780 +1.0 3.0 flagellin compare
MMJJ_RS08780 +1.0 5.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS06875 +1.0 2.6 hypothetical protein compare
MMJJ_RS01750 +1.0 3.6 ferrous iron transport protein A compare
MMJJ_RS02275 +1.0 4.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04790 +1.0 3.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS05710 +0.9 4.5 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06170 +0.9 6.9 hypothetical protein compare
MMJJ_RS00570 +0.9 1.6 ribonuclease P compare
MMJJ_RS06200 +0.9 2.0 phosphoglycerate dehydrogenase compare
MMJJ_RS05765 +0.9 1.7 flagellar protein E compare
MMJJ_RS06240 +0.9 2.3 dihydropteroate synthase-like protein compare
MMJJ_RS06110 +0.9 2.0 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS08095 +0.9 4.1 cobyric acid synthase CobQ compare
MMJJ_RS08190 +0.9 3.3 hypothetical protein compare
MMJJ_RS07030 +0.9 7.9 hypothetical protein compare
MMJJ_RS06175 +0.9 2.7 DUF1743 domain-containing protein compare
MMJJ_RS03670 +0.9 3.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS01360 +0.8 1.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS04150 +0.8 3.1 DUF5379 domain-containing protein compare
MMJJ_RS01880 +0.8 1.8 RlmE family RNA methyltransferase compare
MMJJ_RS05295 +0.8 5.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS08725 +0.8 6.8 flippase compare
MMJJ_RS04975 +0.8 1.9 glycosyltransferase family 4 protein compare
MMJJ_RS05420 +0.8 2.3 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS06490 +0.8 2.9 methanogenesis marker 2 protein compare
MMJJ_RS01415 +0.8 2.1 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS07380 +0.8 5.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS03430 +0.8 2.3 winged helix-turn-helix domain-containing protein compare
MMJJ_RS05820 +0.8 4.4 DUF2304 domain-containing protein compare
MMJJ_RS04615 +0.8 2.8 methanogenesis marker 3 protein compare
MMJJ_RS04200 +0.8 4.8 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03060 +0.8 2.2 methanogenesis marker 7 protein compare
MMJJ_RS03840 +0.8 3.2 DHH family phosphoesterase compare
MMJJ_RS00215 +0.8 2.1 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03125 +0.8 3.2 GMC oxidoreductase compare
MMJJ_RS01960 +0.8 4.9 glycosyltransferase family 2 protein compare
MMJJ_RS06215 +0.8 3.4 agmatinase compare
MMJJ_RS07705 +0.8 2.3 GTP-binding protein EngB compare
MMJJ_RS06390 +0.8 2.0 NADPH-dependent F420 reductase compare
MMJJ_RS05445 +0.8 1.7 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS03785 +0.8 2.1 hypothetical protein compare
MMJJ_RS02045 +0.8 2.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS08155 +0.7 3.6 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS01810 +0.7 1.2 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS04675 +0.7 4.4 thiamine pyrophosphate-binding protein compare
MMJJ_RS03875 +0.7 2.9 CBS domain-containing protein compare
MMJJ_RS04650 +0.7 3.1 nitrogenase iron protein compare
MMJJ_RS04505 +0.7 3.6 CDC48 family AAA ATPase compare
MMJJ_RS05870 +0.7 3.0 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS08715 +0.7 4.9 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS09035 +0.7 3.3 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS00265 +0.7 4.0 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS09375 +0.7 1.2 hypothetical protein compare
MMJJ_RS00195 +0.7 2.8 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS03585 +0.7 0.8 methanogenesis marker 6 protein compare
MMJJ_RS05065 +0.7 3.1 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03660 +0.7 2.1 DUF447 family protein compare
MMJJ_RS03310 +0.7 2.8 hypothetical protein compare
MMJJ_RS02090 +0.7 3.8 tyramine--L-glutamate ligase compare
MMJJ_RS08325 +0.7 1.6 glycosyltransferase family 2 protein compare
MMJJ_RS05935 +0.7 1.9 Era-like GTP-binding protein compare
MMJJ_RS08770 +0.7 3.8 HAD family hydrolase compare
MMJJ_RS00425 +0.7 2.9 hypothetical protein compare
MMJJ_RS03965 +0.7 1.3 DNA-directed RNA polymerase subunit L compare
MMJJ_RS06805 +0.7 2.5 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS04155 +0.7 2.9 hypothetical protein compare
MMJJ_RS04655 +0.6 2.4 FAD-dependent oxidoreductase compare
MMJJ_RS06705 +0.6 2.9 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS05655 +0.6 3.3 HisA/HisF family protein compare
MMJJ_RS08710 +0.6 4.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS00275 +0.6 1.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07155 +0.6 4.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS07485 +0.6 3.7 DedA family protein compare
MMJJ_RS03765 +0.6 3.6 hypothetical protein compare
MMJJ_RS06820 +0.6 3.6 CBS domain-containing protein compare
MMJJ_RS02200 +0.6 4.0 chorismate pyruvate-lyase family protein compare
MMJJ_RS03225 +0.6 1.7 4Fe-4S binding protein compare
MMJJ_RS06040 +0.6 2.1 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS00560 +0.6 1.9 homoisocitrate dehydrogenase compare
MMJJ_RS06220 +0.6 2.9 polyamine aminopropyltransferase compare
MMJJ_RS00270 +0.6 1.5 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS05995 +0.6 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS04375 +0.6 2.2 hypothetical protein compare
MMJJ_RS07840 +0.6 1.4 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS03760 +0.6 1.5 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS09100 +0.6 3.9 COG1361 S-layer family protein compare
MMJJ_RS01935 +0.6 1.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS00180 +0.6 3.5 DNA topoisomerase I compare
MMJJ_RS06700 +0.6 2.6 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS09175 +0.6 1.0 anthranilate synthase component I compare
MMJJ_RS05810 +0.6 2.8 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS04875 +0.6 1.1 tRNA-Lys compare
MMJJ_RS08340 +0.5 2.8 archaeoflavoprotein AfpA compare
MMJJ_RS04480 +0.5 2.8 hypothetical protein compare
MMJJ_RS06250 +0.5 1.3 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS04575 +0.5 3.9 DUF116 domain-containing protein compare
MMJJ_RS06930 +0.5 1.3 type II methionyl aminopeptidase compare
MMJJ_RS09190 +0.5 0.9 tryptophan synthase subunit beta compare
MMJJ_RS04765 +0.5 3.6 metal-dependent hydrolase compare
MMJJ_RS07190 +0.5 2.0 RtcB family protein compare
MMJJ_RS03635 +0.5 1.7 methionine--tRNA ligase compare
MMJJ_RS00205 +0.5 2.0 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS06760 +0.5 1.8 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS07630 +0.5 4.0 hypothetical protein compare
MMJJ_RS03005 +0.5 1.1 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06725 +0.5 3.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS08330 +0.5 1.2 SufD family Fe-S cluster assembly protein compare
MMJJ_RS01690 +0.5 1.5 methanogenesis marker 12 protein compare
MMJJ_RS08925 +0.5 3.8 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03150 +0.5 2.8 2-phospho-L-lactate transferase compare
MMJJ_RS03655 +0.5 1.8 replication factor C large subunit compare
MMJJ_RS00355 +0.5 1.7 ribonuclease P protein component 4 compare
MMJJ_RS09295 +0.5 0.7 hypothetical protein compare
MMJJ_RS05620 +0.5 2.0 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS08720 +0.5 4.0 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS08130 +0.5 0.6 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS08230 +0.5 1.7 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS04520 +0.5 2.2 coenzyme F430 synthase compare
MMJJ_RS07035 +0.5 1.0 glycosyl transferase compare
MMJJ_RS07345 +0.4 2.4 homocysteine biosynthesis protein compare
MMJJ_RS03185 +0.4 1.3 alanine--tRNA ligase compare
MMJJ_RS00285 +0.4 3.7 UPF0254 family protein compare
MMJJ_RS01470 +0.4 1.9 Hsp20/alpha crystallin family protein compare
MMJJ_RS02935 +0.4 0.7 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS03155 +0.4 3.0 hypothetical protein compare
MMJJ_RS01395 +0.4 1.8 DUF1894 domain-containing protein compare
MMJJ_RS01210 +0.4 1.0 hypothetical protein compare
MMJJ_RS05650 +0.4 1.3 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04965 +0.4 1.8 RNA polymerase Rpb4 family protein compare
MMJJ_RS05645 +0.4 1.2 4Fe-4S binding protein compare
MMJJ_RS03270 +0.4 0.7 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS08020 +0.4 2.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06155 +0.4 2.3 phosphatidylglycerophosphatase A compare
MMJJ_RS07405 +0.4 1.8 histone family protein compare
MMJJ_RS03055 +0.4 1.6 hypothetical protein compare
MMJJ_RS06185 +0.4 1.9 cobalamin biosynthesis protein compare
MMJJ_RS07040 +0.4 0.9 preprotein translocase subunit SecY compare
MMJJ_RS01785 +0.4 0.8 50S ribosomal protein L14e compare
MMJJ_RS03295 +0.4 3.5 PHP domain-containing protein compare
MMJJ_RS07370 +0.4 1.7 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS08175 +0.4 2.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06860 +0.4 2.1 hypothetical protein compare
MMJJ_RS08850 +0.4 0.9 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS04755 +0.4 3.0 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS01565 +0.4 2.4 TIGR00267 family protein compare
MMJJ_RS03650 +0.4 2.0 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS04985 +0.4 1.0 glutamyl-tRNA reductase compare
MMJJ_RS01940 +0.4 2.7 hypothetical protein compare
MMJJ_RS08620 +0.4 1.4 DUF373 family protein compare
MMJJ_RS01755 +0.4 0.7 ferrous iron transport protein B compare
MMJJ_RS05490 +0.4 1.0 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS06975 +0.4 1.4 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS04980 +0.4 1.9 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS08055 +0.4 2.2 methanogenesis marker 14 protein compare
MMJJ_RS00415 +0.4 2.2 DedA family protein compare
MMJJ_RS07960 +0.4 1.3 quinolinate synthase NadA compare
MMJJ_RS07280 +0.4 2.4 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07350 +0.4 1.3 4Fe-4S binding protein compare
MMJJ_RS07725 +0.4 1.5 DNA primase DnaG compare
MMJJ_RS03895 +0.4 1.5 hydrogenase expression/formation protein HypE compare
MMJJ_RS06665 +0.4 1.8 DUF3236 domain-containing protein compare
MMJJ_RS00370 +0.4 0.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS07980 +0.4 2.8 biotin synthase BioB compare
MMJJ_RS03490 +0.4 0.7 ribonuclease VapC compare
MMJJ_RS03350 +0.4 0.9 hypothetical protein compare
MMJJ_RS03845 +0.4 1.6 translation initiation factor IF-2 compare
MMJJ_RS04750 +0.4 2.7 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS04760 +0.4 3.1 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS04475 +0.4 1.2 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07775 +0.4 2.1 fluoride efflux transporter CrcB compare
MMJJ_RS02120 +0.4 2.0 DJ-1/PfpI family protein compare
MMJJ_RS06225 +0.3 0.8 adenosylmethionine decarboxylase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in freezer experiments