Experiment set2IT060 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04720 +1.7 1.8 IMP dehydrogenase compare
MMJJ_RS04215 +1.7 13.4 DMT family transporter compare
MMJJ_RS08720 +1.4 11.3 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS09380 +1.4 4.7 hypothetical protein compare
MMJJ_RS08725 +1.3 8.9 flippase compare
MMJJ_RS09295 +1.2 1.2 hypothetical protein compare
MMJJ_RS08025 +1.2 3.0 hypothetical protein compare
MMJJ_RS06130 +1.1 4.4 hypothetical protein compare
MMJJ_RS07235 +1.1 7.9 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS00415 +1.0 4.2 DedA family protein compare
MMJJ_RS07225 +1.0 5.7 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS04480 +1.0 1.9 hypothetical protein compare
MMJJ_RS05530 +1.0 4.0 roadblock/LC7 domain-containing protein compare
MMJJ_RS09265 +1.0 2.8 hypothetical protein compare
MMJJ_RS06975 +1.0 2.8 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS00420 +1.0 4.3 CBS domain-containing protein conserved
MMJJ_RS06275 +1.0 3.7 hypothetical protein compare
MMJJ_RS05525 +0.9 4.8 GTP-binding protein compare
MMJJ_RS06055 +0.9 5.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS08750 +0.9 6.0 glycosyltransferase compare
MMJJ_RS06105 +0.9 4.9 DUF99 family protein compare
MMJJ_RS07230 +0.9 4.6 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06505 +0.8 2.7 prephenate dehydratase compare
MMJJ_RS08065 +0.8 1.1 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS08730 +0.8 6.3 glycosyltransferase family 4 protein compare
MMJJ_RS08760 +0.8 4.7 glycosyltransferase family 9 protein compare
MMJJ_RS05915 +0.8 1.8 multiprotein bridging factor aMBF1 compare
MMJJ_RS06800 +0.8 4.0 prefoldin subunit alpha compare
MMJJ_RS06755 +0.8 5.2 diadenylate cyclase compare
MMJJ_RS06465 +0.8 3.6 hypothetical protein compare
MMJJ_RS05870 +0.8 2.2 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS06770 +0.8 5.5 hypothetical protein compare
MMJJ_RS06210 +0.8 3.3 hypothetical protein compare
MMJJ_RS07220 +0.8 5.2 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS06765 +0.7 5.7 hypothetical protein compare
MMJJ_RS03370 +0.7 1.9 hypothetical protein compare
MMJJ_RS07825 +0.7 2.8 YciI family protein compare
MMJJ_RS06430 +0.7 3.5 haloacid dehalogenase compare
MMJJ_RS06470 +0.7 4.3 tripartite tricarboxylate transporter permease compare
MMJJ_RS05695 +0.7 3.9 class III signal peptide-containing protein compare
MMJJ_RS07270 +0.7 3.5 ribonuclease HII compare
MMJJ_RS06585 +0.7 3.8 alanine racemase compare
MMJJ_RS08370 +0.7 2.3 hypothetical protein compare
MMJJ_RS01010 +0.7 6.2 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07030 +0.7 5.3 hypothetical protein compare
MMJJ_RS06445 +0.7 5.2 hypothetical protein compare
MMJJ_RS05700 +0.7 3.8 metallophosphoesterase compare
MMJJ_RS01210 +0.7 1.1 hypothetical protein compare
MMJJ_RS09390 +0.6 1.4 hypothetical protein compare
MMJJ_RS06190 +0.6 4.2 7-cyano-7-deazaguanine synthase compare
MMJJ_RS08225 +0.6 1.7 peptidylprolyl isomerase compare
MMJJ_RS07025 +0.6 2.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS05980 +0.6 3.0 DUF5400 domain-containing protein compare
MMJJ_RS00525 +0.6 1.6 Dabb family protein compare
MMJJ_RS07210 +0.6 3.6 AmmeMemoRadiSam system protein B compare
MMJJ_RS06205 +0.6 3.4 EamA family transporter compare
MMJJ_RS06450 +0.6 3.6 DUF3343 domain-containing protein compare
MMJJ_RS01125 +0.6 2.0 hypothetical protein compare
MMJJ_RS03725 +0.6 1.6 sulfurtransferase TusA family protein compare
MMJJ_RS04245 +0.6 2.8 flavoprotein compare
MMJJ_RS05035 +0.6 2.8 4Fe-4S binding protein compare
MMJJ_RS06720 +0.6 3.7 mechanosensitive ion channel family protein compare
MMJJ_RS06960 +0.6 4.8 CAP domain-containing protein compare
MMJJ_RS06160 +0.6 3.6 stage II sporulation protein M compare
MMJJ_RS05925 +0.6 3.3 DUF2099 family protein compare
MMJJ_RS08400 +0.6 1.4 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS07905 +0.6 3.3 DUF89 domain-containing protein compare
MMJJ_RS04055 +0.6 2.3 hypothetical protein compare
MMJJ_RS08780 +0.6 2.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS06460 +0.6 3.4 cytochrome c compare
MMJJ_RS02285 +0.6 1.8 class III signal peptide-containing protein compare
MMJJ_RS02860 +0.5 1.5 site-specific integrase compare
MMJJ_RS08345 +0.5 3.6 flavodoxin family protein compare
MMJJ_RS05335 +0.5 2.0 heavy metal-binding domain-containing protein compare
MMJJ_RS09325 +0.5 2.2 hypothetical protein compare
MMJJ_RS06455 +0.5 3.7 YeeE/YedE family protein compare
MMJJ_RS05965 +0.5 4.1 MFS transporter compare
MMJJ_RS06550 +0.5 3.8 ABC transporter permease compare
MMJJ_RS07620 +0.5 3.5 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS06810 +0.5 3.5 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS01590 +0.5 0.6 adenine phosphoribosyltransferase compare
MMJJ_RS05505 +0.5 4.8 hypothetical protein compare
MMJJ_RS06120 +0.5 2.9 DUF4013 domain-containing protein compare
MMJJ_RS06495 +0.5 1.4 hypothetical protein compare
MMJJ_RS06710 +0.5 3.6 TldD/PmbA family protein compare
MMJJ_RS03380 +0.5 1.6 hypothetical protein compare
MMJJ_RS07010 +0.5 2.6 preprotein translocase subunit Sec61beta compare
MMJJ_RS00440 +0.5 3.2 selenide, water dikinase SelD compare
MMJJ_RS09010 +0.5 1.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS05985 +0.5 2.7 ABC transporter substrate-binding protein compare
MMJJ_RS06115 +0.5 3.1 pyruvate kinase compare
MMJJ_RS05815 +0.5 1.8 hypothetical protein compare
MMJJ_RS09130 +0.5 0.7 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS06045 +0.5 3.1 hypothetical protein compare
MMJJ_RS01825 +0.5 1.7 DNA repair and recombination protein RadB compare
MMJJ_RS06680 +0.5 2.4 DUF366 family protein compare
MMJJ_RS06090 +0.5 2.3 hypothetical protein compare
MMJJ_RS08365 +0.5 2.0 DsrE family protein compare
MMJJ_RS07970 +0.5 0.6 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS07645 +0.5 2.5 selenium-binding protein compare
MMJJ_RS06555 +0.5 3.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS06950 +0.5 2.6 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07255 +0.5 3.8 hypothetical protein compare
MMJJ_RS05940 +0.5 2.8 HAD family hydrolase compare
MMJJ_RS06515 +0.5 3.0 ribonuclease III compare
MMJJ_RS06440 +0.5 2.7 DUF4870 domain-containing protein compare
MMJJ_RS00480 +0.5 3.0 flippase compare
MMJJ_RS06675 +0.5 3.0 TIGR01212 family radical SAM protein compare
MMJJ_RS06135 +0.5 2.8 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS06285 +0.4 2.3 YchF/TatD family DNA exonuclease compare
MMJJ_RS05730 +0.4 3.0 TIM barrel protein compare
MMJJ_RS06685 +0.4 3.5 S-layer protein compare
MMJJ_RS04525 +0.4 1.5 hypothetical protein compare
MMJJ_RS06520 +0.4 2.5 TldD/PmbA family protein compare
MMJJ_RS03605 +0.4 1.4 TIGR00297 family protein compare
MMJJ_RS07500 +0.4 2.7 hypothetical protein compare
MMJJ_RS02905 +0.4 1.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS07385 +0.4 2.7 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05510 +0.4 2.1 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS09370 +0.4 1.0 heavy-metal-associated domain-containing protein compare
MMJJ_RS05495 +0.4 2.5 MinD/ParA family protein compare
MMJJ_RS08350 +0.4 3.4 heavy metal translocating P-type ATPase compare
MMJJ_RS08630 +0.4 1.7 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS06640 +0.4 2.7 YfcE family phosphodiesterase compare
MMJJ_RS07610 +0.4 1.6 DUF2119 domain-containing protein compare
MMJJ_RS08040 +0.4 2.5 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS09050 +0.4 1.0 hypothetical protein compare
MMJJ_RS06480 +0.4 2.1 hypothetical protein compare
MMJJ_RS02000 +0.4 1.2 AzlD domain-containing protein compare
MMJJ_RS06075 +0.4 2.2 DNA-binding protein Alba compare
MMJJ_RS05955 +0.4 2.9 radical SAM protein compare
MMJJ_RS07215 +0.4 2.9 TIGR00341 family protein compare
MMJJ_RS07795 +0.4 2.0 cupin domain-containing protein compare
MMJJ_RS06500 +0.4 2.2 class I SAM-dependent methyltransferase compare
MMJJ_RS09255 +0.4 1.1 hypothetical protein compare
MMJJ_RS01060 +0.4 1.5 ABC transporter ATP-binding protein compare
MMJJ_RS04780 +0.4 0.9 nucleic acid-binding protein compare
MMJJ_RS06100 +0.4 2.4 rubrerythrin compare
MMJJ_RS01100 +0.4 0.6 helix-turn-helix domain-containing protein compare
MMJJ_RS06580 +0.4 2.1 alanine dehydrogenase compare
MMJJ_RS06235 +0.4 2.7 IGHMBP2 family helicase compare
MMJJ_RS08705 +0.4 2.2 AEC family transporter compare
MMJJ_RS07260 +0.4 1.9 PspC domain-containing protein compare
MMJJ_RS08785 +0.4 1.5 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS05400 +0.4 1.0 CoA-binding protein compare
MMJJ_RS05250 +0.3 1.9 HDIG domain-containing protein compare
MMJJ_RS05365 +0.3 1.5 DUF2798 domain-containing protein compare
MMJJ_RS04585 +0.3 1.7 phenylacetate--CoA ligase compare
MMJJ_RS07740 +0.3 1.8 DUF2334 domain-containing protein compare
MMJJ_RS07495 +0.3 1.7 4Fe-4S binding protein compare
MMJJ_RS05500 +0.3 2.8 hypothetical protein compare
MMJJ_RS09405 +0.3 1.0 hypothetical protein compare
MMJJ_RS01745 +0.3 1.3 metal-dependent transcriptional regulator compare
MMJJ_RS01515 +0.3 1.2 DUF2178 domain-containing protein compare
MMJJ_RS08075 +0.3 2.4 ATP-dependent DNA helicase compare
MMJJ_RS06280 +0.3 2.4 hypothetical protein compare
MMJJ_RS07505 +0.3 0.3 DNA-directed RNA polymerase subunit K compare
MMJJ_RS07480 +0.3 2.2 FAD-dependent oxidoreductase compare
MMJJ_RS03185 +0.3 0.5 alanine--tRNA ligase compare
MMJJ_RS01285 +0.3 0.9 CopG family ribbon-helix-helix protein compare
MMJJ_RS04090 +0.3 2.4 hypothetical protein compare
MMJJ_RS04365 +0.3 1.4 helix-turn-helix transcriptional regulator compare
MMJJ_RS08775 +0.3 1.9 PfkB family carbohydrate kinase compare
MMJJ_RS00940 +0.3 2.2 aldo/keto reductase compare
MMJJ_RS01265 +0.3 1.1 cupin domain-containing protein compare
MMJJ_RS05875 +0.3 2.6 hypothetical protein compare
MMJJ_RS05205 +0.3 2.0 DUF2118 domain-containing protein compare
MMJJ_RS04165 +0.3 1.9 sodium:solute symporter compare
MMJJ_RS04305 +0.3 2.7 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS04785 +0.3 1.4 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS05890 +0.3 2.0 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS03350 +0.3 0.5 hypothetical protein compare
MMJJ_RS05240 +0.3 2.3 type II secretion system F family protein compare
MMJJ_RS04065 +0.3 1.6 hypothetical protein compare
MMJJ_RS07820 +0.3 2.1 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS08280 +0.3 2.1 radical SAM protein compare
MMJJ_RS03425 +0.3 1.0 DUF2080 family transposase-associated protein compare
MMJJ_RS05150 +0.3 1.8 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS07810 +0.3 1.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS07390 +0.3 1.8 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS05195 +0.3 0.9 hypothetical protein compare
MMJJ_RS03635 +0.3 0.8 methionine--tRNA ligase compare
MMJJ_RS07445 +0.3 1.6 RlmF-related methyltransferase compare
MMJJ_RS09020 +0.3 1.1 hypothetical protein compare
MMJJ_RS09360 +0.3 1.5 hypothetical protein compare
MMJJ_RS04945 +0.3 1.6 PLP-dependent aminotransferase family protein compare
MMJJ_RS07450 +0.3 1.2 hypothetical protein compare
MMJJ_RS07200 +0.3 2.0 MFS transporter compare
MMJJ_RS00785 +0.3 0.5 hypothetical protein compare
MMJJ_RS01320 +0.3 1.5 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMJJ_RS05235 +0.3 2.1 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS09005 +0.3 2.1 N-6 DNA methylase compare
MMJJ_RS03530 +0.3 1.7 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS02115 +0.3 1.5 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS05600 +0.3 1.9 sodium:solute symporter family protein compare
MMJJ_RS07920 +0.2 1.6 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS02665 +0.2 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS08550 +0.2 1.8 B12-binding domain-containing radical SAM protein compare
MMJJ_RS03485 +0.2 1.8 radical SAM protein compare
MMJJ_RS03850 +0.2 0.9 nucleoside-diphosphate kinase compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t2 Sodium acetate in Methanococcus maripaludis JJ

For nutrient t2 Sodium acetate across organisms