Experiment set2IT056 for Sinorhizobium meliloti 1021

Compare to:

LB with MreB Perturbing Compound A22 0.02 mg/ml

200 most important genes:

  gene name fitness t score description  
SMc02641 -7.1 -4.9 UDP-glucose 6-dehydrogenase compare
SMa0833 -5.7 -2.0 hypothetical protein compare
SMc02640 -5.6 -3.9 UDP-glucuronic acid epimerase compare
SMc01220 -5.1 -8.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01024 -4.2 -2.0 preprotein translocase subunit SecG compare
SMc00419 -4.2 -4.0 glutathione synthetase compare
SMc00353 -4.0 -4.1 transmembrane protein compare
SMc01001 -3.9 -14.2 hypothetical protein compare
SMc00334 -3.9 -2.6 cytidylate kinase compare
SMc02147 -3.8 -9.6 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02140 -3.8 -3.1 phosphate regulon transcriptional regulatory protein compare
SMc02232 -3.6 -5.2 hypothetical protein compare
SMc02234 -3.5 -3.2 hypothetical protein compare
SMc02713 -3.5 -2.9 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc03849 -3.3 -2.7 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02115 -3.2 -1.5 hypothetical protein compare
SMc01007 -3.2 -3.4 hypothetical protein compare
SMc02363 -3.0 -4.9 cytochrome C-type biogenesis transmembrane protein compare
SMc02753 -3.0 -2.3 PTS system transporter subunit IIA compare
SMc02141 -2.9 -3.9 phosphate transporter PhoU compare
SMc01222 -2.9 -9.8 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02102 -2.9 -7.5 hypothetical protein compare
SMc02909 -2.9 -3.0 transglycosylase transmembrane protein compare
SMc02144 -2.8 -6.4 phosphate ABC transporter permease compare
SMc02435 -2.6 -3.2 methyltransferase compare
SMc01845 -2.6 -4.0 transglycosylase transmembrane protein compare
SMc02058 -2.6 -4.3 YAJC protein compare
SMc04085 -2.5 -7.1 hypothetical protein compare
SMc03763 -2.5 -4.4 cytosine-specific methyltransferase compare
SMa1570 -2.4 -2.1 PilA2 pilus assembly protein compare
SMc02143 -2.4 -4.5 phosphate ABC transporter permease compare
SMc03993 -2.4 -6.5 hypothetical protein compare
SMc02833 -2.4 -3.1 penicillin-insensitive murein endopeptidase compare
SMc02227 -2.4 -7.8 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMc01280 -2.3 -2.9 protease compare
SMc02714 -2.3 -2.1 hypothetical protein compare
SMc02228 -2.3 -8.1 acetyl-CoA acetyltransferase compare
SMc02850 -2.3 -4.1 DNA polymerase I compare
SMc02229 -2.2 -10.7 acyl-CoA dehydrogenase compare
SMc02362 -2.2 -3.8 cytochrome c-type biogenesis protein CcmE compare
SMc03978 -2.2 -4.6 transketolase compare
SMc02858 -2.1 -1.2 chaperone protein DnaJ compare
SMc02142 -2.1 -6.6 phosphate transporter ATP-binding protein compare
SMc00619 -2.1 -2.4 hypothetical protein compare
SMc03967 -2.0 -2.1 Holliday junction resolvase compare
SMc00513 -2.0 -7.5 amino acid-binding periplasmic protein compare
SMa0789 -2.0 -4.6 GntR family transcriptional regulator compare
SMc02853 -2.0 -5.9 hypothetical protein compare
SMc01454 -1.9 -9.3 hypothetical protein compare
SMc00709 -1.9 -4.9 hypothetical protein compare
SMc02520 -1.8 -10.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02451 -1.8 -2.4 hypothetical protein compare
SMc02906 -1.8 -1.3 hypothetical protein compare
SMc01187 -1.8 -2.3 rare lipoprotein A compare
SMc02683 -1.7 -3.1 hypothetical protein compare
SM_b20563 -1.7 -4.0 hypothetical protein compare
SMc01221 -1.7 -7.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00010 -1.7 -2.8 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00194 -1.6 -4.2 hypothetical protein compare
SMc01147 -1.6 -3.6 coproporphyrinogen III oxidase compare
SMc01929 -1.6 -2.7 hypothetical protein compare
SMc04296 -1.6 -1.4 cell division protein FtsZ compare
SMc02366 -1.6 -9.4 transcriptional regulator compare
SMc02076 -1.5 -10.1 cardiolipin synthetase transmembrane protein compare
SMc02867 -1.5 -4.4 multidrug-efflux system transmembrane protein compare
SMc01969 -1.5 -6.5 hypothetical protein compare
SMc01438 -1.5 -5.9 protease precursor signal peptide protein compare
SMc00025 -1.5 -7.7 pyruvate phosphate dikinase compare
SMc00492 -1.4 -1.2 hypothetical protein compare
SMc01153 -1.4 -1.8 enoyl-CoA hydratase compare
SMc03242 -1.4 -3.3 GTP-binding protein compare
SMc01440 -1.4 -4.8 hydrolase serine protease transmembrane protein compare
SMc02787 -1.4 -3.3 hypothetical protein compare
SMc02055 -1.4 -1.9 phytoene synthase compare
SMc01441 -1.4 -5.5 membrane bound protease compare
SM_b21213 -1.3 -3.9 serinethreonine protein phosphatase compare
SMc02385 -1.3 -2.9 hypothetical protein compare
SMc04385 -1.3 -4.6 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMa1639 -1.3 -1.5 hypothetical protein compare
SMa1095 -1.2 -1.0 hypothetical protein compare
SMc00555 -1.2 -1.4 colicin V production transmembrane protein compare
SMc02849 -1.2 -7.4 2-hydroxyacid dehydrogenase compare
SMc02077 -1.2 -2.4 exodeoxyribonuclease III protein compare
SM_b20307 -1.2 -1.1 dihydroxyacetone kinase compare
SM_b20897 -1.2 -2.5 hypothetical protein compare
SMc01850 -1.2 -3.2 hypothetical protein compare
SMc00856 -1.2 -1.4 hypothetical protein compare
SMc02367 -1.1 -6.5 sensor histidine kinase transmembrane protein compare
SMc02655 -1.1 -3.0 hypothetical protein compare
SMc02543 -1.1 -6.3 hypothetical protein compare
SM_b20324 -1.1 -6.5 ThuR, regulatory protein for trehalosemaltose transport system compare
SMc02308 -1.1 -4.3 hypothetical protein compare
SM_b21580 -1.1 -1.8 hypothetical protein compare
SMc03839 -1.1 -1.6 hypothetical protein compare
SMc04024 -1.1 -4.4 membrane-bound lytic murein transglycosylase compare
SMc03880 -1.1 -6.1 hypothetical protein compare
SMc02373 -1.1 -1.1 hypothetical protein compare
SMc00712 -1.1 -2.1 hypothetical protein compare
SMc03774 -1.1 -2.6 hypothetical protein compare
SMc00053 -1.0 -1.0 monovalent cation/H+ antiporter subunit C compare
SMc01501 -1.0 -2.6 mannitol 2-dehydrogenase compare
SMc00981 -1.0 -5.2 ferredoxin protein compare
SMc00876 -1.0 -3.8 ATP-binding MRP protein compare
SM_b21212 -1.0 -2.8 hypothetical protein compare
SMc02071 -1.0 -4.1 hydrolase glycosidase compare
SM_b20086 -1.0 -2.0 hypothetical protein compare
SMc04330 -1.0 -2.2 trimethylamine methyltransferase compare
SMa0450 -1.0 -2.0 hypothetical protein compare
SMa1924 -1.0 -0.9 hypothetical protein compare
SMc00788 -1.0 -4.0 peptide ABC transporter permease compare
SMc00987 -1.0 -2.6 hypothetical protein compare
SM_b22001 -1.0 -1.4 hypothetical protein compare
SM_b20330 -1.0 -4.0 glucoside 3-dehydrogenase; active on raffinose or trehalose (thuB) (EC 1.1.99.13) (from data) compare
SMc02827 -0.9 -3.5 hypothetical protein compare
SMc01361 -0.9 -3.1 dihydroorotase compare
SMc02434 -0.9 -2.1 hypothetical protein compare
SMc01853 -0.9 -1.8 hypothetical protein compare
SMc03241 -0.9 -4.1 hypothetical protein compare
SMc02155 -0.9 -6.6 hypothetical protein compare
SMc00088 -0.9 -1.7 hypothetical protein compare
SMc04319 -0.9 -1.4 hypothetical protein compare
SM_b20329 -0.9 -6.1 required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data) compare
SMc03924 -0.9 -5.8 glycogen synthase compare
SMc02799 -0.9 -1.7 16S rRNA methyltransferase GidB compare
SMc00914 -0.9 -2.7 oxidoreductase compare
SMc00760 -0.9 -3.2 recombinase A compare
SMc00511 -0.9 -3.7 D-ribulose-5-phosphate 3-epimerase compare
SMc02577 -0.9 -4.1 ATP-dependent protease ATP-binding subunit HslU compare
SMc01006 -0.9 -3.2 hypothetical protein compare
SMc00103 -0.9 -3.8 alpha-halocarboxylic acid dehalogenase compare
SM_b20773 -0.9 -3.4 GntR family transcriptional regulator compare
SMc00295 -0.9 -1.0 hypothetical protein compare
SMc00928 -0.9 -1.1 signal peptide protein compare
SMc01116 -0.9 -3.5 acyltransferase transmembrane protein compare
SMc03072 -0.9 -1.8 hypothetical protein compare
SM_b20948 -0.9 -1.2 glucosyltransferase compare
SMc02505 -0.9 -1.4 hypothetical protein compare
SMc01144 -0.9 -3.0 ribonuclease PH compare
SMc02280 -0.8 -2.0 hypothetical protein compare
SMc04209 -0.8 -4.1 hypothetical protein compare
SMc01119 -0.8 -1.8 hypothetical protein compare
SMc01933 -0.8 -1.1 hypothetical protein compare
SMc01968 -0.8 -2.9 transcriptional regulator compare
SMa2215 -0.8 -2.4 GntR family transcriptional regulator compare
SMc02114 -0.8 -3.7 hypothetical protein compare
SM_b20293 -0.8 -1.1 hypothetical protein compare
SMc02407 -0.8 -3.7 hypothetical protein compare
SMc01723 -0.8 -1.5 hypothetical protein compare
SMc03140 -0.8 -3.4 transcriptional regulator compare
SMa0211 -0.8 -1.0 hypothetical protein compare
SM_b20822 -0.8 -4.3 cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833 compare
SMc01716 -0.8 -3.8 sensor histidine kinase transmembrane protein compare
SMc00859 -0.8 -1.1 hypothetical protein compare
SMc03070 -0.8 -4.7 glucose-6-phosphate 1-dehydrogenase compare
SMc00691 -0.8 -2.9 site-specific tyrosine recombinase XerD compare
SMc01404 -0.8 -2.1 aspartate racemase compare
SMc02758 -0.8 -3.4 nucleotidyl transferase compare
SMc01500 -0.7 -3.6 sorbitol dehydrogenase compare
SMc01472 -0.7 -0.8 50S ribosomal protein L11 methyltransferase compare
SMc02856 -0.7 -4.4 penicillin-binding protein compare
SMc01700 -0.7 -2.5 peptidyl-prolyl cis-trans isomerase A compare
SMa0341 -0.7 -1.0 hypothetical protein compare
SMa0848 -0.7 -1.9 hypothetical protein compare
SM_b20146 -0.7 -3.2 pyridoxal phosphate biosynthetic protein compare
SMc02866 -0.7 -1.7 transcriptional regulator compare
SMc04391 -0.7 -1.0 3-ketoacyl-ACP reductase compare
SMc02307 -0.7 -3.5 histidinol dehydrogenase compare
SMc01701 -0.7 -1.2 hypothetical protein compare
SM_b20752 -0.7 -4.3 3-hydroxyisobutyryl-CoA hydrolase compare
SMc04404 -0.7 -1.2 amino acid efflux transmembrane protein compare
SM_b20353 -0.7 -2.6 oxidoreductase compare
SMc01360 -0.7 -1.5 aspartate carbamoyltransferase catalytic subunit compare
SMc01556 -0.7 -1.5 hypothetical protein compare
SMc00255 -0.7 -4.5 hypothetical protein compare
SMc01258 -0.7 -3.2 hypothetical protein compare
SMc02169 -0.7 -1.4 ABC transporter ATP-binding protein compare
SMc00734 -0.7 -5.2 ribonuclease RNase BN (RBN) transmembrane protein compare
SM_b20806 -0.7 -2.9 hypothetical protein compare
SMc01800 -0.7 -1.2 cytochrome C oxidase assembly transmembrane protein compare
SMc00361 -0.7 -2.0 hypothetical protein compare
SMc03836 -0.7 -1.0 acyl-CoA thioesterase i protein compare
SMc00982 -0.7 -3.2 dioxygenase compare
SM_b20655 -0.7 -1.6 hypothetical protein compare
SMc04311 -0.7 -3.5 hypothetical protein compare
SM_b20803 -0.7 -1.9 3-deoxy-manno-octulosonate cytidylyltransferase compare
SM_b20181 -0.7 -2.8 ABC transporter substrate-binding protein compare
SMc02306 -0.7 -1.0 hypothetical protein compare
SMc01613 -0.6 -2.1 ribose-5-phosphate isomerase B compare
SMc02470 -0.6 -2.2 transcriptional regulator compare
SMc00790 -0.6 -4.9 peptide ABC transporter ATP-binding protein compare
SMc00789 -0.6 -3.8 peptide ABC transporter ATP-binding protein compare
SMa1101 -0.6 -1.1 hypothetical protein compare
SMc02495 -0.6 -1.1 translaldolase compare
SM_b21482 -0.6 -1.8 hypothetical protein compare
SM_b20665 -0.6 -1.6 partial transposase of insertion sequence ISRm17 protein compare
SMc02879 -0.6 -1.1 hypothetical protein compare
SMc04121 -0.6 -1.4 uracil phosphoribosyltransferase compare
SMc03229 -0.6 -1.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b21140 -0.6 -3.8 transcriptional regulator compare
SMc01090 -0.6 -2.4 ATP-dependent RNA helicase compare


Specific Phenotypes

For 5 genes in this experiment

For stress MreB Perturbing Compound A22 in Sinorhizobium meliloti 1021

For stress MreB Perturbing Compound A22 across organisms