Experiment set2IT054 for Sinorhizobium meliloti 1021

Compare to:

LB with Fusidic acid sodium salt 0.0001 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
SMc03826 +2.7 9.3 argininosuccinate synthase compare
SMc00647 +2.3 6.3 ribosomal large subunit pseudouridine synthase compare
SMc00495 +2.2 9.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02478 +2.1 16.0 hypothetical protein compare
SMc03855 +2.1 4.4 hypothetical protein compare
SMc00321 +1.9 12.4 tRNA pseudouridine synthase B compare
SMc02558 +1.9 11.5 hypothetical protein compare
SMc02137 +1.8 8.6 ornithine carbamoyltransferase compare
SMc02138 +1.7 6.1 acetylornithine transaminase compare
SMc02659 +1.6 7.5 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01124 +1.6 10.3 PII uridylyl-transferase compare
SMc02755 +1.6 7.5 S-adenosyl-L-homocysteine hydrolase compare
SMc04003 +1.6 4.1 50S ribosomal protein L36 compare
SMc03900 +1.6 12.6 cyclic beta-1,2-glucan ABc transporter compare
SMc01099 +1.6 4.7 tRNA pseudouridine synthase A compare
SMc02095 +1.6 9.6 hypothetical protein compare
SMc04235 +1.5 8.9 tRNA-dihydrouridine synthase A compare
SM_b20994 +1.5 9.3 hypothetical protein compare
SMc00761 +1.5 10.0 oxidoreductase compare
SMc01439 +1.4 7.4 hypothetical protein compare
SMc00826 +1.4 6.7 16S ribosomal RNA methyltransferase RsmE conserved
SMc03069 +1.3 4.3 6-phosphogluconolactonase compare
SMc00131 +1.3 10.0 transcriptional regulator compare
SMc02058 +1.3 6.0 YAJC protein compare
SMc02503 +1.3 6.8 hypothetical protein compare
SMc01108 +1.3 4.9 tRNA (guanine-N(7)-)-methyltransferase compare
SMc01120 +1.2 4.2 hypothetical protein compare
SMc04382 +1.2 11.5 beta-(1,2)-glucan production associated transmembrane protein compare
SMc04000 +1.2 3.9 hypothetical protein compare
SM_b20613 +1.2 7.6 C4-dicarboxylate transport transcriptional regulator compare
SMc00458 +1.2 9.4 transcriptional regulator compare
SMc01275 +1.2 6.7 ribosomal large subunit pseudouridine synthase C protein compare
SMc00727 +1.1 6.6 3-hydroxybutyryl-CoA dehydrogenase compare
SMc01160 +1.1 3.1 hypothetical protein compare
SMc02684 +1.1 5.2 hydrolase/peptidase compare
SMc02846 +1.1 5.8 sugar kinase compare
SMc01907 +1.1 8.2 hypothetical protein compare
SM_b21009 +1.1 9.2 Glycerol kinase (EC 2.7.1.30) (from data) compare
SMc00403 +1.1 6.0 NOL1/NOP2/SUN family signature protein compare
SMc02793 +1.0 6.9 hypothetical protein compare
SMc00711 +1.0 3.1 cyclohexadienyl dehydrogenase compare
SM_b20143 +1.0 1.8 oligopeptide ABC transporter permease compare
SMc00361 +1.0 4.3 hypothetical protein compare
SM_b21397 +1.0 3.0 hypothetical protein compare
SMc04002 +1.0 6.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01726 +1.0 4.0 acetylglutamate kinase compare
SMc01273 +0.9 7.3 S-formylglutathione hydrolase compare
SMc00827 +0.9 5.7 transport transmembrane protein compare
SMc02309 +0.9 4.4 arsenate reductase compare
SMc00404 +0.9 1.3 hypothetical protein compare
SMc04126 +0.9 5.7 ABC transporter permease compare
SMa0326 +0.9 2.5 short chain alcohol dehydrogenase-related dehydrogenase compare
SM_b20345 +0.9 7.0 efflux protein compare
SMc02858 +0.9 1.0 chaperone protein DnaJ compare
SMc01139 +0.9 3.8 RNA polymerase factor sigma-54 compare
SMc04092 +0.8 2.1 hypothetical protein compare
SMc02504 +0.8 4.6 transcriptional regulator compare
SMc00648 +0.8 3.4 hypothetical protein compare
SMc04232 +0.8 1.4 glycine rich transmembrane protein compare
SMc00904 +0.8 4.6 hypothetical protein compare
SMa0887 +0.8 2.1 hypothetical protein compare
SMc00419 +0.8 4.0 glutathione synthetase compare
SM_b21265 +0.8 5.1 glycosyltransferase compare
SMc01272 +0.8 4.4 hypothetical protein compare
SMa1894 +0.8 2.5 methionine sulfoxide reductase B compare
SMc03987 +0.8 4.4 transport transmembrane protein compare
SMc04127 +0.8 4.5 ABC transporter ATP-binding protein compare
SMc01327 +0.8 4.0 tRNA/rRNA methyltransferase compare
SMc00973 +0.8 1.8 hypothetical protein compare
SMc00247 +0.8 6.1 phosphatidylcholine synthase compare
SMc03795 +0.8 1.1 isopropylmalate isomerase small subunit compare
SM_b21133 +0.8 5.4 sulfate ABC transporter substrate-binding protein compare
SMc01153 +0.8 1.6 enoyl-CoA hydratase compare
SM_b20757 +0.8 4.0 methylmalonyl-CoA mutase compare
SMc01801 +0.8 1.5 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMa0126 +0.7 1.3 CspA8 Cold shock family protein compare
SMc01908 +0.7 4.2 transcriptional regulator compare
SMc02647 +0.7 1.6 transcriptional regulator compare
SM_b20611 +0.7 5.7 C4-dicarboxylate transporter DctA compare
SMa1170 +0.7 2.0 hypothetical protein compare
SMa1639 +0.7 1.5 hypothetical protein compare
SMa1700 +0.7 1.6 hypothetical protein compare
SM_b20701 +0.7 1.0 hypothetical protein compare
SM_b20294 +0.7 1.2 transcriptional regulator NanR compare
SMa1770 +0.7 1.2 hypothetical protein compare
SM_b20346 +0.7 4.7 efflux protein compare
SM_b21408 +0.7 2.3 LysR family transcriptional regulator compare
SMc04125 +0.7 3.1 ABC transporter permease compare
SMc03120 +0.7 1.8 ABC transporter ATP-binding protein compare
SMc02766 +0.7 5.4 tryptophan synthase subunit beta compare
SMc00828 +0.7 4.7 hypothetical protein compare
SMa1765 +0.7 1.2 hypothetical protein compare
SMa1365 +0.7 0.9 ATP-binding protein compare
SMc02084 +0.7 0.7 biopolymer transport transmembrane protein compare
SM_b20866 +0.7 2.3 hypothetical protein compare
SMc00406 +0.7 5.1 4Fe-4S ferredoxin compare
SMc02884 +0.7 4.8 lipoprotein compare
SMc01581 +0.7 2.7 hypothetical protein compare
SMc01419 +0.7 1.5 RNA polymerase sigma factor protein compare
SMc00325 +0.7 2.2 hypothetical protein compare
SMc04276 +0.6 4.5 signal peptide protein compare
SM_b21670 +0.6 2.3 hypothetical protein compare
SMa0776 +0.6 1.5 TRm23b IS ATP-binding protein compare
SMc00337 +0.6 1.5 hypothetical protein compare
SMc01916 +0.6 1.0 signal peptide protein compare
SMc00129 +0.6 3.5 sensor histidine kinase compare
SMc01007 +0.6 1.8 hypothetical protein compare
SMc02757 +0.6 2.6 hypothetical protein compare
SMa0545 +0.6 3.4 hypothetical protein compare
SMc00191 +0.6 1.0 hypothetical protein compare
SMc01846 +0.6 4.5 hydrolase glycosidase compare
SM_b21489 +0.6 2.2 cytochrome O ubiquinol oxidase subunit III compare
SMc02695 +0.6 3.1 GTP-dependent nucleic acid-binding protein EngD compare
SMc05020 +0.6 1.5 entericidin A precursor compare
SM_b20474 +0.6 1.0 hypothetical protein compare
SMa2011 +0.6 1.4 hypothetical protein compare
SM_b20819 +0.6 2.4 ferredoxin compare
SM_b21085 +0.6 2.6 hypothetical protein compare
SM_b20752 +0.6 3.7 3-hydroxyisobutyryl-CoA hydrolase compare
SMa1960 +0.6 2.1 hypothetical protein compare
SM_b20962 +0.6 2.9 phoshomethylpyrimidine kinase compare
SMc02575 +0.6 3.0 ATP-dependent protease peptidase subunit compare
SM_b21272 +0.6 2.7 LacI family transcriptional regulator compare
SM_b21467 +0.6 1.7 hypothetical protein compare
SMc00093 +0.6 4.7 choline dehydrogenase compare
SMa2151 +0.6 1.4 DNA-binding protein compare
SMc03781 +0.6 2.8 rRNA large subunit methyltransferase compare
SMc01427 +0.6 1.1 hypothetical protein compare
SMc01834 +0.6 2.2 hypothetical protein compare
SMc04263 +0.6 4.2 amino acid carrier transmembrane protein compare
SM_b20904 +0.6 1.3 sugar uptake ABC transporter ATP-binding protein compare
SM_b20935 +0.6 2.4 transcriptional regulator compare
SMc00605 +0.6 1.5 hypothetical protein compare
SM_b21494 +0.6 3.2 ornithine cyclodeaminase compare
SMc03801 +0.6 1.4 thioredoxin protein compare
SMc01933 +0.6 0.8 hypothetical protein compare
SMc01769 +0.6 4.6 hypothetical protein compare
SM_b21156 +0.6 3.0 hypothetical protein compare
SMc01589 +0.6 2.5 hypothetical protein compare
SMc03824 +0.6 1.7 transcriptional regulator compare
SMc01509 +0.6 1.4 hypothetical protein compare
SMc04432 +0.6 2.6 hypothetical protein compare
SM_b20883 +0.6 1.3 hypothetical protein compare
SM_b21412 +0.6 1.6 hypothetical protein compare
SMa0740 +0.6 1.3 hypothetical protein compare
SMc00418 +0.6 2.8 hypothetical protein compare
SM_b21374 +0.6 2.0 tagatose kinase (EC 2.7.1.101) (from data) compare
SM_b20218 +0.6 1.6 sensor histidine kinase compare
SMc01363 +0.6 1.0 hypothetical protein compare
SMc00709 +0.6 2.2 hypothetical protein compare
SMc02906 +0.6 0.7 hypothetical protein compare
SMc00853 +0.6 1.3 hypothetical protein compare
SMa5023 +0.6 2.4 hypothetical protein compare
SM_b20746 +0.5 0.8 hypothetical protein compare
SMa1200 +0.5 2.3 hypothetical protein compare
SM_b21497 +0.5 2.8 acriflavin resistance protein compare
SM_b20909 +0.5 1.5 hypothetical protein compare
SM_b20043 +0.5 4.3 hypothetical protein compare
SM_b21131 +0.5 3.8 sulfate ABC transporter permease compare
SM_b20612 +0.5 3.0 C4-dicarboxylate transport sensor protein compare
SMc04401 +0.5 2.0 transcriptional regulator compare
SMc01512 +0.5 2.1 hemin binding periplasmic transmembrane protein compare
SM_b20347 +0.5 1.8 transcriptional regulator compare
SMc03831 +0.5 3.1 hypothetical protein compare
SMc03849 +0.5 0.5 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02051 +0.5 1.5 hypothetical protein compare
SM_b21395 +0.5 1.6 hypothetical protein compare
SMc02181 +0.5 4.2 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
SM_b20282 +0.5 0.9 spermidine/putrescine ABC transporter permease compare
SM_b21084 +0.5 1.5 hypothetical protein compare
SMc02577 +0.5 3.1 ATP-dependent protease ATP-binding subunit HslU compare
SM_b20411 +0.5 2.0 hypothetical protein compare
SMc00487 +0.5 2.6 hypothetical protein compare
SMc01852 +0.5 3.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMa0850 +0.5 2.4 hypothetical protein compare
SMc03037 +0.5 1.2 flagellin A compare
SMc01193 +0.5 3.7 hypothetical protein compare
SMc00414 +0.5 3.5 hypothetical protein compare
SM_b21491 +0.5 3.5 hypothetical protein compare
SMc02201 +0.5 2.2 hypothetical protein compare
SMa0753 +0.5 0.5 hypothetical protein compare
SM_b21334 +0.5 1.8 hypothetical protein compare
SMc02765 +0.5 3.5 tryptophan synthase subunit alpha compare
SMc04357 +0.5 1.4 hypothetical protein compare
SM_b21372 +0.5 3.6 LacI family transcriptional regulator compare
SMc03210 +0.5 1.2 transcriptional regulator compare
SMc02174 +0.5 2.1 hypothetical protein compare
SMc01660 +0.5 1.5 hypothetical protein compare
SMc01440 +0.5 1.8 hydrolase serine protease transmembrane protein compare
SMc01504 +0.5 2.2 two-component response regulator compare
SM_b20725 +0.5 1.0 hypothetical protein compare
SMa2215 +0.5 1.9 GntR family transcriptional regulator compare
SMa1101 +0.5 1.0 hypothetical protein compare
SMc03880 +0.5 3.0 hypothetical protein compare
SMc04001 +0.5 0.5 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00589 +0.5 1.8 hypothetical protein compare
SMc00732 +0.5 2.3 hypothetical protein compare
SM_b20987 +0.5 1.0 siroheme synthase compare
SMc01006 +0.5 1.7 hypothetical protein compare
SMc04318 +0.5 1.8 cold shock transcription regulator protein compare


Specific Phenotypes

For 18 genes in this experiment

For stress Fusidic acid sodium salt in Sinorhizobium meliloti 1021

For stress Fusidic acid sodium salt across organisms