Experiment set2IT053 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.4 6.1 hypothetical protein compare
MMJJ_RS09295 +0.7 1.1 hypothetical protein compare
MMJJ_RS09370 +0.6 2.9 heavy-metal-associated domain-containing protein compare
MMJJ_RS06495 +0.5 1.7 hypothetical protein compare
MMJJ_RS06130 +0.5 3.0 hypothetical protein compare
MMJJ_RS01475 +0.5 0.8 signal recognition particle-docking protein FtsY compare
MMJJ_RS09325 +0.5 3.5 hypothetical protein compare
MMJJ_RS09380 +0.4 2.1 hypothetical protein compare
MMJJ_RS01010 +0.4 4.3 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS05915 +0.4 1.9 multiprotein bridging factor aMBF1 compare
MMJJ_RS09265 +0.4 1.7 hypothetical protein compare
MMJJ_RS08720 +0.4 3.3 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS01785 +0.4 0.7 50S ribosomal protein L14e compare
MMJJ_RS08025 +0.4 1.8 hypothetical protein compare
MMJJ_RS08515 +0.4 1.9 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06430 +0.4 2.9 haloacid dehalogenase compare
MMJJ_RS06455 +0.4 3.1 YeeE/YedE family protein compare
MMJJ_RS06720 +0.4 3.0 mechanosensitive ion channel family protein compare
MMJJ_RS09390 +0.4 1.6 hypothetical protein compare
MMJJ_RS05115 +0.3 1.6 P-II family nitrogen regulator compare
MMJJ_RS08725 +0.3 2.7 flippase compare
MMJJ_RS06680 +0.3 2.1 DUF366 family protein compare
MMJJ_RS06205 +0.3 2.6 EamA family transporter compare
MMJJ_RS09355 +0.3 1.9 hypothetical protein compare
MMJJ_RS06585 +0.3 2.2 alanine racemase compare
MMJJ_RS01110 +0.3 1.3 hypothetical protein compare
MMJJ_RS06055 +0.3 2.0 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS06770 +0.3 2.5 hypothetical protein compare
MMJJ_RS06190 +0.3 2.5 7-cyano-7-deazaguanine synthase compare
MMJJ_RS03205 +0.3 1.9 metallophosphoesterase compare
MMJJ_RS04215 +0.3 2.5 DMT family transporter compare
MMJJ_RS06445 +0.3 2.5 hypothetical protein compare
MMJJ_RS06440 +0.3 2.1 DUF4870 domain-containing protein compare
MMJJ_RS08730 +0.3 2.3 glycosyltransferase family 4 protein compare
MMJJ_RS06470 +0.3 2.2 tripartite tricarboxylate transporter permease compare
MMJJ_RS06045 +0.3 2.1 hypothetical protein compare
MMJJ_RS03345 +0.3 1.2 hypothetical protein compare
MMJJ_RS09120 +0.3 0.6 aspartate kinase compare
MMJJ_RS06105 +0.3 2.1 DUF99 family protein compare
MMJJ_RS05190 +0.3 1.6 gamma carbonic anhydrase family protein compare
MMJJ_RS00525 +0.3 0.9 Dabb family protein compare
MMJJ_RS03410 +0.3 1.4 hypothetical protein compare
MMJJ_RS06280 +0.3 2.2 hypothetical protein compare
MMJJ_RS04585 +0.3 2.0 phenylacetate--CoA ligase compare
MMJJ_RS06640 +0.3 2.0 YfcE family phosphodiesterase compare
MMJJ_RS01515 +0.3 1.5 DUF2178 domain-containing protein compare
MMJJ_RS04375 +0.3 0.8 hypothetical protein compare
MMJJ_RS06580 +0.3 2.0 alanine dehydrogenase compare
MMJJ_RS06465 +0.2 1.7 hypothetical protein compare
MMJJ_RS09405 +0.2 0.8 hypothetical protein compare
MMJJ_RS07660 +0.2 1.5 carbonic anhydrase compare
MMJJ_RS08365 +0.2 1.3 DsrE family protein compare
MMJJ_RS06135 +0.2 1.9 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS09020 +0.2 1.4 hypothetical protein compare
MMJJ_RS06710 +0.2 2.1 TldD/PmbA family protein compare
MMJJ_RS07740 +0.2 1.8 DUF2334 domain-containing protein compare
MMJJ_RS06450 +0.2 1.9 DUF3343 domain-containing protein compare
MMJJ_RS06295 +0.2 1.7 DUF2096 family protein compare
MMJJ_RS07690 +0.2 1.8 glycosyltransferase family 4 protein compare
MMJJ_RS06275 +0.2 1.5 hypothetical protein compare
MMJJ_RS04720 +0.2 0.5 IMP dehydrogenase compare
MMJJ_RS07385 +0.2 1.8 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS06975 +0.2 0.9 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS05870 +0.2 1.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS05700 +0.2 1.8 metallophosphoesterase compare
MMJJ_RS03350 +0.2 0.6 hypothetical protein compare
MMJJ_RS06765 +0.2 2.0 hypothetical protein compare
MMJJ_RS05980 +0.2 1.6 DUF5400 domain-containing protein compare
MMJJ_RS05335 +0.2 1.6 heavy metal-binding domain-containing protein compare
MMJJ_RS06810 +0.2 1.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06515 +0.2 1.8 ribonuclease III compare
MMJJ_RS00950 +0.2 1.4 DUF111 family protein compare
MMJJ_RS06520 +0.2 1.7 TldD/PmbA family protein compare
MMJJ_RS01850 +0.2 1.4 RNA 2',3'-cyclic phosphodiesterase compare
MMJJ_RS04055 +0.2 1.4 hypothetical protein compare
MMJJ_RS08400 +0.2 1.2 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS06740 +0.2 1.4 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS05400 +0.2 1.6 CoA-binding protein compare
MMJJ_RS01035 +0.2 1.2 hypothetical protein compare
MMJJ_RS01125 +0.2 1.4 hypothetical protein compare
MMJJ_RS06115 +0.2 1.7 pyruvate kinase compare
MMJJ_RS04065 +0.2 1.5 hypothetical protein compare
MMJJ_RS07665 +0.2 1.9 formate dehydrogenase subunit alpha compare
MMJJ_RS01140 +0.2 1.3 helix-turn-helix domain-containing protein compare
MMJJ_RS08580 +0.2 1.2 YkgJ family cysteine cluster protein compare
MMJJ_RS06550 +0.2 1.6 ABC transporter permease compare
MMJJ_RS06235 +0.2 1.7 IGHMBP2 family helicase compare
MMJJ_RS07210 +0.2 1.6 AmmeMemoRadiSam system protein B compare
MMJJ_RS06960 +0.2 1.8 CAP domain-containing protein compare
MMJJ_RS06120 +0.2 1.5 DUF4013 domain-containing protein compare
MMJJ_RS07595 +0.2 1.1 hypothetical protein compare
MMJJ_RS06100 +0.2 1.5 rubrerythrin compare
MMJJ_RS08075 +0.2 1.7 ATP-dependent DNA helicase compare
MMJJ_RS07795 +0.2 1.4 cupin domain-containing protein compare
MMJJ_RS08015 +0.2 1.3 HAD family hydrolase compare
MMJJ_RS02295 +0.2 1.7 hypothetical protein compare
MMJJ_RS05505 +0.2 1.8 hypothetical protein compare
MMJJ_RS05250 +0.2 1.4 HDIG domain-containing protein compare
MMJJ_RS02110 +0.2 1.1 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS07025 +0.2 1.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07910 +0.2 1.3 CBS domain-containing protein compare
MMJJ_RS06555 +0.2 1.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS05510 +0.2 1.4 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS02885 +0.2 1.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS05035 +0.2 1.2 4Fe-4S binding protein compare
MMJJ_RS01405 +0.2 0.3 proline--tRNA ligase compare
MMJJ_RS07495 +0.2 1.2 4Fe-4S binding protein compare
MMJJ_RS09155 +0.2 1.5 RluA family pseudouridine synthase compare
MMJJ_RS08295 +0.2 1.6 iron ABC transporter substrate-binding protein compare
MMJJ_RS09330 +0.2 1.2 hypothetical protein compare
MMJJ_RS04190 +0.2 1.4 hypothetical protein compare
MMJJ_RS01950 +0.2 1.3 hypothetical protein compare
MMJJ_RS07985 +0.2 1.1 hypothetical protein compare
MMJJ_RS05815 +0.2 0.9 hypothetical protein compare
MMJJ_RS07255 +0.2 1.5 hypothetical protein compare
MMJJ_RS06290 +0.2 1.0 DUF749 domain-containing protein compare
MMJJ_RS07825 +0.2 0.7 YciI family protein compare
MMJJ_RS06685 +0.2 1.5 S-layer protein compare
MMJJ_RS03850 +0.2 1.0 nucleoside-diphosphate kinase compare
MMJJ_RS08885 +0.2 1.3 cysteine--tRNA ligase compare
MMJJ_RS08175 +0.2 1.1 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07685 +0.2 1.4 glycogen/starch synthase compare
MMJJ_RS04175 +0.2 1.1 hypothetical protein compare
MMJJ_RS08690 +0.2 1.2 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS08040 +0.2 1.2 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS05350 +0.2 1.2 DUF192 domain-containing protein compare
MMJJ_RS08050 +0.2 1.4 ABC transporter substrate-binding protein compare
MMJJ_RS07835 +0.2 1.1 UPF0489 family protein compare
MMJJ_RS07240 +0.2 1.4 MBL fold metallo-hydrolase compare
MMJJ_RS08395 +0.2 1.4 CoB--CoM heterodisulfide reductase subunit B compare
MMJJ_RS07215 +0.2 1.3 TIGR00341 family protein compare
MMJJ_RS07270 +0.2 1.1 ribonuclease HII compare
MMJJ_RS08740 +0.2 1.3 class I SAM-dependent methyltransferase compare
MMJJ_RS07670 +0.2 1.3 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS05890 +0.2 1.3 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS05030 +0.2 1.3 orotate phosphoribosyltransferase-like protein compare
MMJJ_RS08930 +0.1 1.1 5'/3'-nucleotidase SurE compare
MMJJ_RS08370 +0.1 0.9 hypothetical protein compare
MMJJ_RS09005 +0.1 1.4 N-6 DNA methylase compare
MMJJ_RS04305 +0.1 1.4 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS05195 +0.1 0.8 hypothetical protein compare
MMJJ_RS06755 +0.1 1.2 diadenylate cyclase compare
MMJJ_RS06080 +0.1 1.3 serine/threonine protein kinase compare
MMJJ_RS06460 +0.1 1.0 cytochrome c compare
MMJJ_RS06950 +0.1 1.1 4-demethylwyosine synthase TYW1 compare
MMJJ_RS05405 +0.1 1.2 DNA cytosine methyltransferase compare
MMJJ_RS06500 +0.1 1.0 class I SAM-dependent methyltransferase compare
MMJJ_RS05985 +0.1 1.0 ABC transporter substrate-binding protein compare
MMJJ_RS07390 +0.1 1.1 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS06800 +0.1 0.9 prefoldin subunit alpha compare
MMJJ_RS05410 +0.1 0.9 RecB-family nuclease compare
MMJJ_RS05900 +0.1 1.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS04165 +0.1 1.2 sodium:solute symporter compare
MMJJ_RS07400 +0.1 0.7 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMJJ_RS08345 +0.1 1.1 flavodoxin family protein compare
MMJJ_RS06675 +0.1 1.1 TIGR01212 family radical SAM protein compare
MMJJ_RS06160 +0.1 1.1 stage II sporulation protein M compare
MMJJ_RS05235 +0.1 1.2 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS08350 +0.1 1.2 heavy metal translocating P-type ATPase compare
MMJJ_RS07815 +0.1 1.1 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS06475 +0.1 0.9 AAA family ATPase compare
MMJJ_RS01760 +0.1 1.0 N-acetyltransferase compare
MMJJ_RS01435 +0.1 1.2 4Fe-4S binding protein compare
MMJJ_RS03415 +0.1 0.9 hypothetical protein compare
MMJJ_RS07445 +0.1 1.1 RlmF-related methyltransferase compare
MMJJ_RS07365 +0.1 1.1 CatB-related O-acetyltransferase compare
MMJJ_RS00785 +0.1 0.5 hypothetical protein compare
MMJJ_RS08360 +0.1 1.1 FprA family A-type flavoprotein compare
MMJJ_RS05365 +0.1 0.9 DUF2798 domain-containing protein compare
MMJJ_RS01070 +0.1 0.4 PadR family transcriptional regulator compare
MMJJ_RS01065 +0.1 0.9 DUF1700 domain-containing protein compare
MMJJ_RS01060 +0.1 0.9 ABC transporter ATP-binding protein compare
MMJJ_RS07610 +0.1 0.8 DUF2119 domain-containing protein compare
MMJJ_RS04260 +0.1 1.0 molybdopterin molybdotransferase MoeA compare
MMJJ_RS03690 +0.1 0.8 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS07905 +0.1 0.8 DUF89 domain-containing protein compare
MMJJ_RS06790 +0.1 1.1 nucleotidyltransferase family protein compare
MMJJ_RS07010 +0.1 0.8 preprotein translocase subunit Sec61beta compare
MMJJ_RS04275 +0.1 0.8 ABC transporter ATP-binding protein compare
MMJJ_RS05605 +0.1 0.9 hypothetical protein compare
MMJJ_RS03370 +0.1 0.4 hypothetical protein compare
MMJJ_RS07450 +0.1 0.7 hypothetical protein compare
MMJJ_RS02080 +0.1 1.0 AMP-binding protein compare
MMJJ_RS06075 +0.1 0.8 DNA-binding protein Alba compare
MMJJ_RS08165 +0.1 0.7 thermonuclease family protein compare
MMJJ_RS08450 +0.1 0.9 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS02665 +0.1 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS03955 +0.1 0.8 hypothetical protein compare
MMJJ_RS04820 +0.1 0.9 hypothetical protein compare
MMJJ_RS05955 +0.1 1.0 radical SAM protein compare
MMJJ_RS01210 +0.1 0.5 hypothetical protein compare
MMJJ_RS07200 +0.1 1.0 MFS transporter compare
MMJJ_RS01735 +0.1 0.8 rubrerythrin family protein compare
MMJJ_RS03380 +0.1 0.6 hypothetical protein compare
MMJJ_RS00910 +0.1 0.9 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07915 +0.1 0.8 CBS domain-containing protein compare
MMJJ_RS06590 +0.1 0.9 sodium:alanine symporter family protein compare
MMJJ_RS02000 +0.1 0.6 AzlD domain-containing protein compare
MMJJ_RS08065 +0.1 0.4 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS07645 +0.1 0.7 selenium-binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms