Experiment set2IT051 for Methanococcus maripaludis S2

Compare to:

Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01370 +5.3 32.4 acetate--CoA ligase family protein compare
MMP_RS05950 +2.0 13.9 nickel-dependent hydrogenase large subunit compare
MMP_RS08340 +2.0 12.9 4Fe-4S binding protein compare
MMP_RS08345 +2.0 14.0 4Fe-4S binding protein compare
MMP_RS08370 +1.9 2.9 cation:proton antiporter subunit C compare
MMP_RS08360 +1.8 8.2 hypothetical protein compare
MMP_RS08365 +1.8 9.9 energy conserving hydrogenase EhbF compare
MMP_RS08355 +1.8 11.4 Na(+)/H(+) antiporter subunit B compare
MMP_RS07725 +1.7 11.7 4Fe-4S dicluster domain-containing protein compare
MMP_RS08335 +1.6 5.0 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS08350 +1.6 3.3 hypothetical protein compare
MMP_RS00810 +1.5 5.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01865 +1.4 4.5 GPR1/FUN34/YaaH family transporter compare
MMP_RS03215 +1.3 8.6 MBL fold metallo-hydrolase compare
MMP_RS03390 +1.3 6.2 malate dehydrogenase compare
MMP_RS03300 +1.2 1.7 TOBE domain-containing protein compare
MMP_RS03385 +1.1 2.5 cation diffusion facilitator family transporter compare
MMP_RS01650 +0.9 1.6 sulfurtransferase TusA family protein compare
MMP_RS05435 +0.9 6.0 5'/3'-nucleotidase SurE compare
MMP_RS02245 +0.9 3.6 hypothetical protein compare
MMP_RS02745 +0.8 1.6 hypothetical protein compare
MMP_RS06860 +0.8 2.4 4Fe-4S binding protein compare
MMP_RS01335 +0.8 3.4 prefoldin subunit beta compare
MMP_RS08280 +0.7 3.9 proteasome assembly chaperone family protein compare
MMP_RS07860 +0.7 0.7 hypothetical protein compare
MMP_RS04480 +0.6 5.5 lysine 2 3-aminomutase compare
MMP_RS03320 +0.6 1.5 metal-dependent transcriptional regulator compare
MMP_RS08690 +0.6 4.5 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare
MMP_RS06575 +0.6 3.6 fluoride efflux transporter CrcB compare
MMP_RS03150 +0.6 4.0 phosphoglycerate mutase compare
MMP_RS00675 +0.5 0.9 nitroreductase family protein compare
MMP_RS07095 +0.5 2.1 PspC domain-containing protein compare
MMP_RS05975 +0.5 1.4 hypothetical protein compare
MMP_RS03340 +0.5 0.9 ABC transporter ATP-binding protein compare
MMP_RS07435 +0.5 1.7 GMP synthase subunit A compare
MMP_RS07115 +0.5 3.0 MBL fold metallo-hydrolase compare
MMP_RS08085 +0.5 3.3 hypothetical protein compare
MMP_RS01675 +0.5 1.4 hypothetical protein compare
MMP_RS06840 +0.5 0.7 DNA-directed RNA polymerase subunit N compare
MMP_RS06155 +0.5 1.3 DUF4186 domain-containing protein compare
MMP_RS06905 +0.5 2.1 hypothetical protein compare
MMP_RS07970 +0.5 2.1 hypothetical protein compare
MMP_RS07560 +0.5 2.3 prefoldin subunit alpha compare
MMP_RS02495 +0.5 2.0 hypothetical protein compare
MMP_RS06855 +0.4 3.5 hypothetical protein compare
MMP_RS05535 +0.4 1.5 hypothetical protein compare
MMP_RS01570 +0.4 1.2 hypothetical protein compare
MMP_RS07750 +0.4 2.4 DUF357 domain-containing protein compare
MMP_RS08685 +0.4 3.3 hypothetical protein compare
MMP_RS02175 +0.4 0.5 DUF1611 domain-containing protein compare
MMP_RS02370 +0.4 1.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS08835 +0.4 2.2 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS07620 +0.4 2.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05450 +0.4 1.6 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS00660 +0.4 3.1 alkaline phosphatase family protein compare
MMP_RS08075 +0.4 2.0 DUF749 domain-containing protein compare
MMP_RS04100 +0.4 1.6 hypothetical protein compare
MMP_RS08315 +0.4 1.0 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS07720 +0.4 2.9 4Fe-4S binding protein compare
MMP_RS01470 +0.3 2.1 ATP-binding cassette domain-containing protein compare
MMP_RS05910 +0.3 1.1 cell division ATPase MinD compare
MMP_RS00080 +0.3 2.3 RecB-family nuclease compare
MMP_RS07765 +0.3 2.1 sodium:alanine symporter family protein compare
MMP_RS00850 +0.3 2.1 TIGR01177 family methyltransferase compare
MMP_RS02475 +0.3 0.7 hypothetical protein compare
MMP_RS08980 +0.3 1.7 hypothetical protein compare
MMP_RS08265 +0.3 1.7 rubrerythrin compare
MMP_RS05525 +0.3 2.5 calcium/sodium antiporter compare
MMP_RS01620 +0.3 1.7 hypothetical protein compare
MMP_RS05990 +0.3 2.2 DsrE family protein compare
MMP_RS05970 +0.3 1.2 class II SORL domain-containing protein compare
MMP_RS07130 +0.3 2.4 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS01435 +0.3 1.4 DMT family transporter compare
MMP_RS08775 +0.3 1.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS04520 +0.3 1.5 nucleoside deaminase compare
MMP_RS00950 +0.3 2.2 site-2 protease family protein compare
MMP_RS05365 +0.3 0.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08275 +0.3 2.0 hypothetical protein compare
MMP_RS03330 +0.3 2.2 rubrerythrin family protein compare
MMP_RS03465 +0.3 0.6 adenine phosphoribosyltransferase compare
MMP_RS05675 +0.3 1.1 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS07120 +0.3 2.2 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS08245 +0.3 1.6 DUF4013 domain-containing protein compare
MMP_RS05660 +0.3 1.6 phosphate ABC transporter substrate-binding protein compare
MMP_RS04485 +0.3 2.0 putative beta-lysine N-acetyltransferase compare
MMP_RS01465 +0.3 1.2 hypothetical protein compare
MMP_RS07155 +0.3 1.8 MFS transporter compare
MMP_RS01990 +0.3 1.3 hypothetical protein compare
MMP_RS03235 +0.2 1.3 tRNA pseudouridine(13) synthase TruD compare
MMP_RS00375 +0.2 1.9 ammonium transporter compare
MMP_RS00705 +0.2 0.6 hypothetical protein compare
MMP_RS05245 +0.2 1.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS08615 +0.2 0.7 flagellar protein G compare
MMP_RS04020 +0.2 1.3 hypothetical protein compare
MMP_RS06650 +0.2 1.8 glycoside hydrolase family 57 protein compare
MMP_RS08620 +0.2 1.0 flagellar accessory protein FlaH compare
MMP_RS03225 +0.2 1.3 acetolactate decarboxylase compare
MMP_RS03890 +0.2 1.4 DUF2540 domain-containing protein compare
MMP_RS02025 +0.2 1.7 DNA-directed DNA polymerase compare
MMP_RS00655 +0.2 1.2 hypothetical protein compare
MMP_RS03220 +0.2 0.8 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS06910 +0.2 1.5 RlmF-related methyltransferase compare
MMP_RS05780 +0.2 1.8 multidrug resistance efflux transporter family protein compare
MMP_RS07715 +0.2 1.8 YfcE family phosphodiesterase compare
MMP_RS07615 +0.2 1.7 energy-coupling factor ABC transporter permease compare
MMP_RS08995 +0.2 0.6 hypothetical protein compare
MMP_RS08535 +0.2 1.7 bis-aminopropyl spermidine synthase family protein compare
MMP_RS05250 +0.2 0.4 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07840 +0.2 1.0 ribonuclease III compare
MMP_RS08290 +0.2 1.6 DNA-binding protein Alba compare
MMP_RS08430 +0.2 1.5 HAD family hydrolase compare
MMP_RS01765 +0.2 0.9 HIT family protein compare
MMP_RS06590 +0.2 1.0 GNAT family N-acetyltransferase compare
MMP_RS07985 +0.2 1.8 nitroreductase family protein compare
MMP_RS06665 +0.2 1.6 glycogen/starch synthase compare
MMP_RS04030 +0.2 1.5 hypothetical protein compare
MMP_RS08260 +0.2 1.5 DUF99 family protein compare
MMP_RS04515 +0.2 1.5 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMP_RS01430 +0.2 1.7 mechanosensitive ion channel family protein compare
MMP_RS08285 +0.2 1.3 serine/threonine protein kinase compare
MMP_RS08205 +0.2 1.4 stage II sporulation protein M compare
MMP_RS04260 +0.2 0.9 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS03775 +0.2 0.6 4Fe-4S dicluster domain-containing protein compare
MMP_RS01115 +0.2 1.4 molybdopterin molybdotransferase MoeA compare
MMP_RS06140 +0.2 0.7 radical SAM protein compare
MMP_RS06660 +0.2 1.3 glycosyltransferase family 4 protein compare
MMP_RS07085 +0.2 1.4 ribonuclease HII compare
MMP_RS04880 +0.2 1.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08230 +0.2 1.4 50S ribosomal protein L11 methyltransferase compare
MMP_RS04205 +0.2 1.5 carboxymuconolactone decarboxylase family protein compare
MMP_RS07905 +0.2 1.3 DUF3343 domain-containing protein compare
MMP_RS01420 +0.2 0.5 hypothetical protein compare
MMP_RS07140 +0.2 1.6 TIGR00341 family protein compare
MMP_RS02805 +0.2 0.4 HEPN domain-containing protein compare
MMP_RS05175 +0.2 1.3 hypothetical protein compare
MMP_RS08395 +0.2 1.2 DsrE family protein compare
MMP_RS05170 +0.2 1.1 lysine exporter LysO family protein compare
MMP_RS06335 +0.2 1.1 HAD family hydrolase compare
MMP_RS03470 +0.2 1.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07100 +0.2 1.2 hypothetical protein compare
MMP_RS00630 +0.2 1.3 ECF transporter S component compare
MMP_RS03990 +0.2 1.2 recombinase family protein compare
MMP_RS07335 +0.2 0.6 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS08235 +0.2 1.1 hypothetical protein compare
MMP_RS06655 +0.2 1.1 glycoside hydrolase family 15 protein compare
MMP_RS07145 +0.2 1.1 AmmeMemoRadiSam system protein B compare
MMP_RS04015 +0.2 0.7 hypothetical protein compare
MMP_RS08485 +0.2 1.5 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS02510 +0.2 1.1 site-specific integrase compare
MMP_RS06190 +0.2 1.2 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS09050 +0.2 0.7 CAP domain-containing protein compare
MMP_RS08500 +0.2 1.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS02375 +0.2 1.2 hypothetical protein compare
MMP_RS06965 +0.2 1.1 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS07925 +0.2 0.9 haloacid dehalogenase compare
MMP_RS07835 +0.2 0.7 TldD/PmbA family protein compare
MMP_RS00955 +0.2 1.2 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS01485 +0.2 1.1 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS01055 +0.2 0.7 hypothetical protein compare
MMP_RS02455 +0.2 0.9 hypothetical protein compare
MMP_RS01685 +0.2 0.6 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00145 +0.2 1.2 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS06045 +0.2 1.1 DNA polymerase compare
MMP_RS00185 +0.2 1.3 potassium channel protein compare
MMP_RS07770 +0.2 0.9 alanine racemase compare
MMP_RS01550 +0.1 1.0 DUF1624 domain-containing protein compare
MMP_RS00665 +0.1 1.0 hypothetical protein compare
MMP_RS02590 +0.1 1.1 low molecular weight phosphatase family protein compare
MMP_RS01210 +0.1 1.1 sodium:solute symporter compare
MMP_RS00195 +0.1 1.3 DUF4013 domain-containing protein compare
MMP_RS08160 +0.1 0.9 EamA family transporter compare
MMP_RS00795 +0.1 1.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS04305 +0.1 0.6 hypothetical protein compare
MMP_RS02300 +0.1 0.6 NAD(P)H-dependent oxidoreductase compare
MMP_RS02890 +0.1 0.9 TIGR00296 family protein compare
MMP_RS01130 +0.1 1.1 flavoprotein compare
MMP_RS09065 +0.1 1.2 hypothetical protein compare
MMP_RS07135 +0.1 1.0 coenzyme F420 hydrogenase subunit beta compare
MMP_RS02895 +0.1 0.9 DHH family phosphoesterase compare
MMP_RS00800 +0.1 1.1 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01125 +0.1 0.9 thioredoxin family protein compare
MMP_RS04730 +0.1 1.1 flavodoxin family protein compare
MMP_RS02380 +0.1 0.9 ATP-binding protein compare
MMP_RS04315 +0.1 0.9 corrinoid protein compare
MMP_RS05615 +0.1 1.1 radical SAM protein compare
MMP_RS07595 +0.1 1.0 hypothetical protein compare
MMP_RS09025 +0.1 0.3 hypothetical protein compare
MMP_RS06075 +0.1 0.7 class I SAM-dependent methyltransferase compare
MMP_RS05445 +0.1 0.7 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS05360 +0.1 0.9 hypothetical protein compare
MMP_RS03740 +0.1 0.8 indolepyruvate oxidoreductase subunit beta compare
MMP_RS03860 +0.1 1.0 hypothetical protein compare
MMP_RS08130 +0.1 0.9 IGHMBP2 family helicase compare
MMP_RS00565 +0.1 0.6 CBS domain-containing protein compare
MMP_RS08310 +0.1 0.4 TMEM165/GDT1 family protein compare
MMP_RS02295 +0.1 1.0 TatD family hydrolase compare
MMP_RS04150 +0.1 0.9 MFS transporter compare
MMP_RS02320 +0.1 1.1 glutamate-cysteine ligase family protein compare
MMP_RS01680 +0.1 1.0 phenylacetate--CoA ligase compare
MMP_RS01065 +0.1 1.0 alpha/beta hydrolase compare


Specific Phenotypes

For 2 genes in this experiment

For nutrient t2 Sodium acetate in Methanococcus maripaludis S2

For nutrient t2 Sodium acetate across organisms