Experiment set2IT051 for Cupriavidus basilensis FW507-4G11

Compare to:

L-Leucine carbon source

200 most detrimental genes:

  gene name fitness t score description  
RR42_RS05420 +2.6 11.4 membrane protein compare
RR42_RS05425 +2.5 11.9 membrane protein compare
RR42_RS05085 +2.1 3.5 2-aminomuconate deaminase compare
RR42_RS21470 +1.9 2.3 hypothetical protein compare
RR42_RS35900 +1.7 9.2 hypothetical protein compare
RR42_RS17235 +1.5 9.3 poly(A) polymerase compare
RR42_RS17565 +1.5 10.9 LysR family transcriptional regulator compare
RR42_RS29610 +1.5 2.3 cytochrome C2 compare
RR42_RS28800 +1.3 9.0 isocitrate dehydrogenase compare
RR42_RS05075 +1.3 2.2 aminocarboxymuconate-semialdehyde decarboxylase compare
RR42_RS09085 +1.3 1.7 C4-dicarboxylate ABC transporter permease compare
RR42_RS17665 +1.2 3.1 chorismate lyase compare
RR42_RS24520 +1.2 2.6 hypothetical protein compare
RR42_RS15705 +1.2 4.9 glycosyl transferase family 1 compare
RR42_RS01795 +1.1 8.4 phosphoenolpyruvate-protein phosphotransferase compare
RR42_RS05755 +1.1 2.4 enoyl-CoA hydratase compare
RR42_RS11680 +1.0 3.2 hypothetical protein compare
RR42_RS03020 +1.0 1.7 MarR family transcriptional regulator compare
RR42_RS03035 +1.0 1.3 membrane protein compare
RR42_RS15755 +1.0 2.1 acetyltransferase compare
RR42_RS13685 +1.0 2.3 cupin compare
RR42_RS23140 +1.0 1.1 peptidylprolyl isomerase compare
RR42_RS23305 +1.0 1.3 hypothetical protein compare
RR42_RS25455 +1.0 1.7 acetyl-CoA acetyltransferase compare
RR42_RS04810 +0.9 2.6 glycine/betaine ABC transporter permease compare
RR42_RS33430 +0.9 1.9 LysR family transcriptional regulator compare
RR42_RS19465 +0.9 7.0 AsnC family transcriptional regulator compare
RR42_RS14985 +0.9 1.7 30S ribosomal protein S21 compare
RR42_RS05750 +0.8 1.4 fructose 2,6-bisphosphatase compare
RR42_RS02470 +0.8 2.2 dihydroneopterin triphosphate pyrophosphatase compare
RR42_RS23120 +0.8 2.6 hypothetical protein compare
RR42_RS13065 +0.8 5.5 ribonuclease R compare
RR42_RS09760 +0.8 1.6 hypothetical protein compare
RR42_RS21850 +0.8 1.9 3-oxoadipate enol-lactonase compare
RR42_RS20295 +0.8 1.6 alpha/beta hydrolase compare
RR42_RS30440 +0.8 3.4 cation:proton antiporter compare
RR42_RS21055 +0.8 2.1 excisionase compare
RR42_RS01510 +0.8 3.0 N-acetylglutamate synthase compare
RR42_RS35725 +0.8 1.3 flagellar biosynthesis protein FlgB compare
RR42_RS00345 +0.8 2.0 LysR family transcriptional regulator compare
RR42_RS13625 +0.8 1.7 4-hydroxybenzoyl-CoA reductase compare
RR42_RS14840 +0.8 3.5 IclR family transcriptional regulator compare
RR42_RS06785 +0.8 1.5 hypothetical protein compare
RR42_RS15795 +0.7 2.7 spore coat protein compare
RR42_RS24500 +0.7 3.0 hypothetical protein compare
RR42_RS35190 +0.7 3.4 LacI family transcriptional regulator compare
RR42_RS20775 +0.7 1.0 hypothetical protein compare
RR42_RS21690 +0.7 0.9 acetyltransferase compare
RR42_RS33940 +0.7 2.5 naphthalene 1,2-dioxygenase compare
RR42_RS26540 +0.7 1.1 3-phosphoglycerate dehydrogenase compare
RR42_RS16335 +0.7 1.2 hypothetical protein compare
RR42_RS35140 +0.7 1.9 2-hydroxylaminobenzoate mutase compare
RR42_RS25510 +0.7 1.2 short-chain dehydrogenase compare
RR42_RS24760 +0.7 1.0 hypothetical protein compare
RR42_RS35085 +0.7 2.9 MarR family transcriptional regulator compare
RR42_RS24785 +0.7 2.8 NAD-dependent dehydratase compare
RR42_RS06735 +0.7 1.1 hypothetical protein compare
RR42_RS16575 +0.7 1.8 acyl-CoA dehydrogenase compare
RR42_RS25400 +0.7 1.8 MarR family transcriptional regulator compare
RR42_RS03990 +0.7 2.9 aspartate:proton symporter Glt (from data) compare
RR42_RS08245 +0.7 1.4 hypothetical protein compare
RR42_RS20855 +0.7 2.3 cold-shock protein compare
RR42_RS17880 +0.7 0.9 hypothetical protein compare
RR42_RS10400 +0.7 2.0 hypothetical protein compare
RR42_RS36415 +0.7 0.9 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
RR42_RS32710 +0.7 1.6 hypothetical protein compare
RR42_RS17230 +0.7 2.4 phosphoserine phosphatase compare
RR42_RS33690 +0.7 1.3 phosphate acetyltransferase compare
RR42_RS12215 +0.7 2.6 ribonuclease compare
RR42_RS01485 +0.7 1.3 phosphonate transporter compare
RR42_RS15080 +0.7 1.6 GntR family transcriptional regulator compare
RR42_RS08770 +0.7 0.7 2-nitropropane dioxygenase compare
RR42_RS19645 +0.7 1.7 DNA topoisomerase compare
RR42_RS06335 +0.7 1.4 cyclophilin compare
RR42_RS23205 +0.7 0.8 hypothetical protein compare
RR42_RS03505 +0.7 2.1 replication/virulence associated protein compare
RR42_RS00490 +0.7 2.4 potassium-transporting ATPase subunit C compare
RR42_RS35295 +0.6 1.5 diguanylate cyclase compare
RR42_RS25650 +0.6 1.0 hypothetical protein compare
RR42_RS25720 +0.6 2.7 hypothetical protein compare
RR42_RS28085 +0.6 1.1 alkylphosphonate utilization protein PhnG compare
RR42_RS36835 +0.6 1.5 cytochrome P450 compare
RR42_RS17355 +0.6 0.6 hypothetical protein compare
RR42_RS10855 +0.6 0.8 diguanylate phosphodiesterase compare
RR42_RS07150 +0.6 0.8 hypothetical protein compare
RR42_RS01365 +0.6 2.6 hypothetical protein compare
RR42_RS15600 +0.6 2.5 glutathione S-transferase compare
RR42_RS22230 +0.6 1.2 hypothetical protein compare
RR42_RS33180 +0.6 4.4 hypothetical protein compare
RR42_RS35080 +0.6 4.2 membrane protein compare
RR42_RS37240 +0.6 0.9 hypothetical protein compare
RR42_RS06240 +0.6 0.9 tryptophan--tRNA ligase compare
RR42_RS19805 +0.6 2.1 enoyl-CoA hydratase compare
RR42_RS36245 +0.6 2.2 excisionase compare
RR42_RS06020 +0.6 0.7 Fe-S cluster assembly transcriptional regulator IscR compare
RR42_RS26875 +0.6 1.8 LysR family transcriptional regulator compare
RR42_RS17730 +0.6 1.3 hypothetical protein compare
RR42_RS29505 +0.6 1.2 hypothetical protein compare
RR42_RS15710 +0.6 3.2 LPS biosynthesis protein compare
RR42_RS01045 +0.6 1.2 Fur family transcriptional regulator compare
RR42_RS01690 +0.6 3.0 ferredoxin compare
RR42_RS18385 +0.6 1.6 hypothetical protein compare
RR42_RS17805 +0.6 0.6 hypothetical protein compare
RR42_RS22185 +0.6 1.6 LysR family transcriptional regulator compare
RR42_RS08470 +0.6 1.0 hypothetical protein compare
RR42_RS37045 +0.6 0.9 thiamine biosynthesis protein ApbE compare
RR42_RS32050 +0.6 1.2 AraC family transcriptional regulator compare
RR42_RS35995 +0.6 1.5 membrane protein compare
RR42_RS24505 +0.6 3.3 hypothetical protein compare
RR42_RS26050 +0.6 1.8 hypothetical protein compare
RR42_RS03465 +0.6 2.1 biopolymer transporter ExbD compare
RR42_RS20710 +0.6 2.5 AraC family transcriptional regulator compare
RR42_RS22030 +0.6 1.3 hypothetical protein compare
RR42_RS16565 +0.6 1.6 hypothetical protein compare
RR42_RS19895 +0.6 1.2 elongation factor GreAB compare
RR42_RS05165 +0.6 1.3 GntR family transcriptional regulator compare
RR42_RS11415 +0.6 2.4 hypothetical protein compare
RR42_RS31830 +0.6 1.1 short-chain dehydrogenase compare
RR42_RS16655 +0.6 2.4 glutamine cyclotransferase compare
RR42_RS16460 +0.6 1.1 cupin compare
RR42_RS26555 +0.6 1.1 tRNA-Met compare
RR42_RS33070 +0.6 1.3 oxidoreductase compare
RR42_RS07155 +0.6 1.2 hypothetical protein compare
RR42_RS26385 +0.6 2.9 hypothetical protein compare
RR42_RS07030 +0.6 2.5 hypothetical protein compare
RR42_RS15715 +0.5 3.3 glycosyl transferase compare
RR42_RS08220 +0.5 1.1 hypothetical protein compare
RR42_RS22010 +0.5 2.5 histidine kinase compare
RR42_RS34610 +0.5 1.3 hydroxyacid dehydrogenase compare
RR42_RS34525 +0.5 2.0 type VI secretion protein VasK compare
RR42_RS03695 +0.5 2.0 hypothetical protein compare
RR42_RS17850 +0.5 1.5 thioredoxin compare
RR42_RS21015 +0.5 2.1 mannose-1-phosphate guanyltransferase compare
RR42_RS05220 +0.5 2.4 aromatic-ring-hydroxylating dioxygenase compare
RR42_RS00975 +0.5 1.7 MBL fold metallo-hydrolase compare
RR42_RS07310 +0.5 2.9 hypothetical protein compare
RR42_RS36445 +0.5 2.0 acetyl-CoA acetyltransferase compare
RR42_RS28420 +0.5 2.8 4-hydroxy-4-methyl-2-oxoglutarate aldolase compare
RR42_RS17100 +0.5 2.6 membrane protein compare
RR42_RS09580 +0.5 0.7 hypothetical protein compare
RR42_RS13425 +0.5 2.7 hypothetical protein compare
RR42_RS30410 +0.5 1.3 hypothetical protein compare
RR42_RS00800 +0.5 2.6 histidine kinase compare
RR42_RS17020 +0.5 3.5 quinolinate synthetase compare
RR42_RS00360 +0.5 1.1 Asp/Glu/hydantoin racemase compare
RR42_RS09555 +0.5 1.1 universal stress protein UspA compare
RR42_RS01315 +0.5 1.8 GNAT family acetyltransferase compare
RR42_RS12240 +0.5 0.7 hypothetical protein compare
RR42_RS01610 +0.5 2.4 3-hydroxybutyryl-CoA dehydrogenase compare
RR42_RS14785 +0.5 2.8 hypothetical protein compare
RR42_RS02420 +0.5 0.7 SAM-dependent methyltransferase compare
RR42_RS32965 +0.5 2.1 salicylaldehyde dehydrogenase compare
RR42_RS12280 +0.5 1.7 aliphatic sulfonate ABC transporter ATP-binding protein compare
RR42_RS31995 +0.5 1.1 flavin reductase compare
RR42_RS11435 +0.5 2.0 ABC transporter permease compare
RR42_RS08480 +0.5 1.4 hypothetical protein compare
RR42_RS13055 +0.5 2.6 NAD-dependent protein deacylase compare
RR42_RS30735 +0.5 1.0 tRNA-Met compare
RR42_RS16685 +0.5 1.1 tRNA-Leu compare
RR42_RS21965 +0.5 2.0 hypothetical protein compare
RR42_RS02850 +0.5 1.6 phoH-like protein compare
RR42_RS11275 +0.5 2.4 3-methylitaconate isomerase compare
RR42_RS32960 +0.5 1.2 2-dehydropantoate 2-reductase compare
RR42_RS17045 +0.5 3.2 SAM-dependent methyltransferase compare
RR42_RS13850 +0.5 1.6 hypothetical protein compare
RR42_RS20615 +0.5 1.8 ripartite tricarboxylate transport (TTT) family transporter compare
RR42_RS25610 +0.5 2.7 alpha/beta hydrolase compare
RR42_RS12980 +0.5 2.0 chemotaxis protein CheY compare
RR42_RS04935 +0.5 2.5 hypothetical protein compare
RR42_RS10410 +0.5 1.9 hypothetical protein compare
RR42_RS23990 +0.5 2.8 hypothetical protein compare
RR42_RS19750 +0.5 0.5 MBL fold metallo-hydrolase compare
RR42_RS18325 +0.5 1.7 acylphosphatase compare
RR42_RS16175 +0.5 0.8 enoyl-CoA hydratase compare
RR42_RS05260 +0.5 2.0 purine permease compare
RR42_RS24795 +0.5 1.5 butyryl-CoA dehydrogenase compare
RR42_RS10835 +0.5 2.1 hypothetical protein compare
RR42_RS09605 +0.5 1.6 hypothetical protein compare
RR42_RS26485 +0.5 1.3 2,5-dihydroxypyridine 5,6-dioxygenase compare
RR42_RS15225 +0.5 0.8 RNA-binding protein compare
RR42_RS18395 +0.5 1.2 hypothetical protein compare
RR42_RS09240 +0.5 0.5 MFS transporter compare
RR42_RS04340 +0.5 2.8 hypothetical protein compare
RR42_RS27060 +0.5 1.2 cation transporter compare
RR42_RS28400 +0.5 1.0 CoA-transferase compare
RR42_RS22880 +0.5 2.4 ABC transporter permease compare
RR42_RS12880 +0.5 1.6 membrane protein compare
RR42_RS15790 +0.5 2.1 aminotransferase class III compare
RR42_RS35660 +0.5 2.2 hypothetical protein compare
RR42_RS19480 +0.5 2.1 secretion system protein G compare
RR42_RS02580 +0.5 2.9 amino acid ABC transporter permease compare
RR42_RS26725 +0.5 1.5 diguanylate cyclase compare
RR42_RS14980 +0.5 2.0 glutamyl-tRNA amidotransferase compare
RR42_RS14620 +0.5 2.0 hypothetical protein compare
RR42_RS07885 +0.5 2.4 chemotaxis protein CheY compare
RR42_RS15495 +0.5 1.9 hypothetical protein compare
RR42_RS08700 +0.5 1.5 hypothetical protein compare
RR42_RS12085 +0.5 1.1 glyoxalase compare
RR42_RS21020 +0.5 1.9 hypothetical protein compare
RR42_RS16185 +0.5 2.2 malonyl-CoA decarboxylase compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source L-Leucine in Cupriavidus basilensis FW507-4G11

For carbon source L-Leucine across organisms