Experiment set2IT050 for Sinorhizobium meliloti 1021

Compare to:

LB with Sodium nitrite 20 mM

200 most detrimental genes:

  gene name fitness t score description  
SMa1630 +1.6 3.2 hypothetical protein compare
SMc02084 +1.5 2.1 biopolymer transport transmembrane protein compare
SMc00191 +1.3 3.1 hypothetical protein compare
SMc01930 +1.2 4.4 hypothetical protein compare
SMc00337 +0.9 2.0 hypothetical protein compare
SMa5015 +0.9 1.6 hypothetical protein compare
SMc03826 +0.9 3.1 argininosuccinate synthase compare
SM_b20282 +0.9 2.7 spermidine/putrescine ABC transporter permease compare
SM_b20755 +0.8 6.3 propionyl-CoA carboxylase subunit beta compare
SMc05011 +0.8 2.9 bacteriophage DNA-binding transcription regulator compare
SM_b20143 +0.8 1.5 oligopeptide ABC transporter permease compare
SMc02980 +0.8 1.8 hypothetical protein compare
SMc04224 +0.7 1.1 hypothetical protein compare
SMc02266 +0.7 2.0 hypothetical protein compare
SM_b20026 +0.7 1.6 hypothetical protein compare
SMa1240 +0.7 1.2 NapF ferredoxin component of periplasmic nitrate reductase compare
SM_b21182 +0.7 4.8 hypothetical protein compare
SMc03932 +0.7 3.2 sarcosine oxidase subunit delta compare
SMc02753 +0.7 1.5 PTS system transporter subunit IIA compare
SMc00132 +0.7 1.4 hypothetical protein compare
SMa0144 +0.6 1.0 hypothetical protein compare
SM_b20757 +0.6 4.3 methylmalonyl-CoA mutase compare
SMa1078 +0.6 2.6 hypothetical protein compare
SMc03092 +0.6 1.4 transcriptional regulator compare
SMc00416 +0.6 3.8 hypothetical protein compare
SM_b21408 +0.6 2.4 LysR family transcriptional regulator compare
SM_b20756 +0.6 4.2 propionyl-CoA carboxylase subunit alpha compare
SMa1765 +0.6 1.2 hypothetical protein compare
SMa0933 +0.6 1.8 TraC conjugal transfer protein compare
SM_b21003 +0.6 1.8 oxidoreductase compare
SMa1201 +0.6 1.7 hypothetical protein compare
SMc01417 +0.6 1.7 hypothetical protein compare
SMc04202 +0.6 2.9 transmembrane protein compare
SMc02495 +0.6 0.8 translaldolase compare
SMa0314 +0.6 1.1 hypothetical protein compare
SMa5011 +0.6 1.2 oxidoreductase compare
SMc01724 +0.6 1.7 hypothetical protein compare
SMc00150 +0.6 5.1 hypothetical protein compare
SM_b20307 +0.6 0.8 dihydroxyacetone kinase compare
SMc02694 +0.6 0.8 ATP-dependent Clp protease adaptor compare
SMc03899 +0.6 0.8 hypothetical protein compare
SM_b20896 +0.6 2.2 LysR family transcriptional regulator compare
SMc00421 +0.6 3.2 O-acetylserine sulfhydrylase A compare
SMc02647 +0.5 1.4 transcriptional regulator compare
SMc01916 +0.5 0.9 signal peptide protein compare
SMa0882 +0.5 0.8 hypothetical protein compare
SMa1450 +0.5 2.2 thiolase compare
SM_b21181 +0.5 3.2 glutaryl-CoA dehydrogenase compare
SMc00389 +0.5 1.7 hypothetical protein compare
SMc02886 +0.5 0.8 signal peptide protein compare
SMc00295 +0.5 0.9 hypothetical protein compare
SMc01341 +0.5 2.1 hypothetical protein compare
SMc01019 +0.5 4.0 hypothetical protein compare
SMc04174 +0.5 1.0 signal peptide protein compare
SMc02707 +0.5 1.4 hypothetical protein compare
SMa0887 +0.5 1.0 hypothetical protein compare
SM_b20294 +0.5 0.6 transcriptional regulator NanR compare
SMa5033 +0.5 0.8 hypothetical protein compare
SMc02164 +0.5 1.7 fructokinase compare
SM_b20296 +0.5 2.0 permease compare
SMc04866 +0.5 1.4 hypothetical protein compare
SMa0886 +0.5 1.1 hypothetical protein compare
SMc04001 +0.5 0.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMa2009 +0.5 2.7 hypothetical protein compare
SMc04094 +0.5 1.2 hypothetical protein compare
SMa0087 +0.5 2.0 hypothetical protein compare
SMc01456 +0.5 1.5 hypothetical protein compare
SMc00849 +0.5 2.4 hypothetical protein compare
SMc04114 +0.5 2.1 pilin subunit protein compare
SM_b20302 +0.5 1.1 hypothetical protein compare
SMc03831 +0.5 2.9 hypothetical protein compare
SMa2229 +0.5 2.4 hypothetical protein compare
SM_b20983 +0.5 2.1 hypothetical protein compare
SMc01327 +0.5 2.8 tRNA/rRNA methyltransferase compare
SM_b20962 +0.5 1.5 phoshomethylpyrimidine kinase compare
SM_b20105 +0.5 1.1 transcriptional regulator compare
SMc00804 +0.5 1.2 hypothetical protein compare
SMc01236 +0.5 1.9 hypothetical protein compare
SMa1700 +0.5 1.0 hypothetical protein compare
SMc01244 +0.5 1.4 tRNA-Ala compare
SMc03028 +0.5 0.9 flagellar basal body rod protein FlgC compare
SMc04143 +0.5 2.1 transcriptional regulator compare
SM_b20371 +0.5 2.5 ribose-5-phosphate isomerase B compare
SMa1323 +0.5 1.0 Transcription regulator compare
SM_b20948 +0.5 0.5 glucosyltransferase compare
SMc05009 +0.5 1.6 nodulation protein NolR compare
SMc01176 +0.5 2.1 hypothetical protein compare
SMc04348 +0.4 1.4 transcriptional regulator compare
SMc00079 +0.4 1.3 hypothetical protein compare
SMc01347 +0.4 1.7 hypothetical protein compare
SMa0325 +0.4 1.7 hypothetical protein compare
SMa2034 +0.4 0.9 hypothetical protein compare
SM_b21458 +0.4 2.2 sugar uptake ABC transporter permease compare
SM_b21509 +0.4 1.1 plasmid stability protein compare
SMa0816 +0.4 1.6 FixX ferredoxin-like protein compare
SM_b20452 +0.4 1.5 hypothetical protein compare
SM_b21667 +0.4 1.1 hypothetical protein compare
SMc00167 +0.4 2.4 signal peptide protein compare
SMc03019 +0.4 2.2 flagellar motor switch protein G compare
SMc01518 +0.4 1.7 hypothetical protein compare
SM_b21172 +0.4 1.9 hypothetical protein compare
SMc03849 +0.4 0.8 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20256 +0.4 2.3 hypothetical protein compare
SMa1398 +0.4 1.3 3-ketoacyl-ACP reductase compare
SM_b20157 +0.4 2.4 ABC transporter substrate-binding protein compare
SMa1894 +0.4 1.4 methionine sulfoxide reductase B compare
SM_b21506 +0.4 2.5 cell surface polysaccharides export protein compare
SM_b21474 +0.4 2.0 3-ketoacyl-ACP reductase compare
SM_b20268 +0.4 2.2 hydroxyproline-2-epimerase compare
SMc02549 +0.4 2.4 hypothetical protein compare
SM_b20072 +0.4 1.9 rhizopine binding protein compare
SMc04337 +0.4 2.1 hypothetical protein compare
SMa0657 +0.4 1.8 cytochrome c binding protein, amino terminus compare
SMa1046 +0.4 2.1 adenylate cyclase compare
SM_b20218 +0.4 1.4 sensor histidine kinase compare
SMa0083 +0.4 1.9 ABC transporter ATP-binding protein compare
SMc01595 +0.4 1.0 sensor histidine kinase transmembrane protein compare
SMc03806 +0.4 1.5 nitrogen regulatory protein PII 2 compare
SM_b21373 +0.4 1.9 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SM_b20940 +0.4 2.9 hypothetical protein compare
SMc02247 +0.4 0.7 signal peptide protein compare
SMc00976 +0.4 1.2 enoyl-CoA hydratase compare
SMc00535 +0.4 1.6 hypothetical protein compare
SMc03031 +0.4 1.2 flagellar basal body P-ring biosynthesis protein FlgA compare
SM_b20992 +0.4 1.6 hypothetical protein compare
SMc04128 +0.4 2.4 heavy metal transporting ATPase compare
SMc01363 +0.4 0.8 hypothetical protein compare
SM_b20131 +0.4 1.1 oxidoreductase compare
SMc04462 +0.4 1.8 glycerate dehydrogenase compare
SM_b21695 +0.4 2.1 hypothetical protein compare
SMc02900 +0.4 1.7 hypothetical protein compare
SMc00854 +0.4 1.2 hypothetical protein compare
SM_b20114 +0.4 1.5 hypothetical protein compare
SMc01241 +0.4 0.9 hypothetical protein compare
SMc01858 +0.4 0.7 S-adenosyl-methyltransferase MraW compare
SMa1002 +0.4 0.8 hypothetical protein compare
SMc00329 +0.4 1.4 iron response regulator protein compare
SMc00727 +0.4 2.5 3-hydroxybutyryl-CoA dehydrogenase compare
SMc00352 +0.4 0.7 acetyltransferase compare
SMc00410 +0.4 1.9 oxidoreductase compare
SMc03140 +0.4 1.9 transcriptional regulator compare
SMc04030 +0.4 1.3 hypothetical protein compare
SMa1427 +0.4 0.9 ABC transporter substrate-binding protein compare
SM_b20172 +0.4 1.1 cytochrome c protein compare
SMc01948 +0.4 1.6 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMc02313 +0.4 1.8 hypothetical protein compare
SMc01278 +0.4 1.4 chaperone-like protein compare
SMa0771 +0.4 1.0 hypothetical protein compare
SMa0407 +0.4 2.2 hypothetical protein compare
SMc03751 +0.4 1.3 hypothetical protein compare
SMc01765 +0.4 0.6 hypothetical protein compare
SMa0643 +0.4 0.8 transposase compare
SMc00347 +0.4 1.0 nucleoside diphosphate kinase regulator compare
SMc02727 +0.4 1.8 hypothetical protein compare
SMc01430 +0.4 1.3 acetolactate synthase 3 regulatory subunit compare
SM_b21455 +0.4 1.6 hypothetical protein compare
SMc01770 +0.4 0.9 serine hydroxymethyltransferase compare
SMc01651 +0.4 0.7 transcriptional regulator compare
SMc02582 +0.4 1.7 hypothetical protein compare
SM_b21632 +0.4 1.7 3-hydroxyacyl-CoA dehydrogenase compare
SMc00064 +0.4 2.1 hypothetical protein compare
SMc02323 +0.3 1.6 transcriptional regulator compare
SM_b21126 +0.3 2.2 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) compare
SM_b20347 +0.3 1.3 transcriptional regulator compare
SM_b21377 +0.3 1.3 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc01625 +0.3 1.8 ABC transporter ATP-binding protein compare
SMc02253 +0.3 1.4 salicylate biosynthesis protein compare
SMc03072 +0.3 0.7 hypothetical protein compare
SMc01529 +0.3 1.1 peptide ABC transporter ATP-binding protein compare
SM_b21096 +0.3 0.6 amino acid transporter ABC transporter ATP-binding protein compare
SMc00698 +0.3 0.7 transcriptional regulator compare
SMc02515 +0.3 1.8 hypothetical protein compare
SMa1325 +0.3 1.4 hypothetical protein compare
SMa0838 +0.3 1.1 SyrA protein involved in EPS production compare
SM_b21198 +0.3 2.5 oligopeptide uptake ABC transporter permease compare
SMc04166 +0.3 2.0 hypothetical protein compare
SM_b21465 +0.3 2.0 HlyD family protein secretion protein compare
SMc03922 +0.3 2.9 glycogen branching protein compare
SMc01619 +0.3 0.5 hypothetical protein compare
SMc02583 +0.3 1.7 hypothetical protein compare
SMa1259 +0.3 2.1 hypothetical protein compare
SMa0894 +0.3 1.0 hypothetical protein compare
SMc00418 +0.3 1.2 hypothetical protein compare
SM_b21145 +0.3 1.5 choline uptake ABC transporter permease compare
SMa1021 +0.3 1.7 hypothetical protein compare
SMc01354 +0.3 1.1 metal-dependent hydrolase compare
SM_b21263 +0.3 1.8 mureinpeptideoligopeptide ABC transporter permease compare
SMc03091 +0.3 1.5 arginase compare
SM_b20629 +0.3 1.9 hypothetical protein compare
SMc02184 +0.3 1.5 transcriptional regulator compare
SMa0448 +0.3 1.2 hypothetical protein compare
SMc00174 +0.3 2.5 hypothetical protein compare
SMc01622 +0.3 1.7 oxidoreductase compare
SM_b20480 +0.3 2.0 transcriptional regulator compare
SMc02941 +0.3 1.4 hypothetical protein compare
SMc03284 +0.3 1.1 hypothetical protein compare
SMc02786 +0.3 2.0 translocase transmembrane protein compare
SMc01857 +0.3 1.6 cell division protein MraZ compare
SM_b20774 +0.3 0.9 hypothetical protein compare
SMa0825 +0.3 1.8 nitrogenase reductase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium nitrite in Sinorhizobium meliloti 1021

For stress Sodium nitrite across organisms