Experiment set2IT050 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 5g/L bicarb, 40 psi H2CO2

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.1 7.1 hypothetical protein compare
MMJJ_RS04720 +1.7 3.4 IMP dehydrogenase compare
MMJJ_RS09295 +0.8 1.3 hypothetical protein compare
MMJJ_RS03205 +0.7 5.2 metallophosphoesterase compare
MMJJ_RS03360 +0.7 1.3 hypothetical protein compare
MMJJ_RS07035 +0.6 0.9 glycosyl transferase compare
MMJJ_RS04215 +0.6 5.6 DMT family transporter compare
MMJJ_RS08450 +0.5 3.6 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS06055 +0.5 3.6 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS03350 +0.5 1.8 hypothetical protein compare
MMJJ_RS04780 +0.4 1.9 nucleic acid-binding protein compare
MMJJ_RS06975 +0.4 2.4 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS09390 +0.4 1.6 hypothetical protein compare
MMJJ_RS00525 +0.4 1.1 Dabb family protein compare
MMJJ_RS08730 +0.4 3.3 glycosyltransferase family 4 protein compare
MMJJ_RS04580 +0.4 3.1 2-phosphosulfolactate phosphatase compare
MMJJ_RS05190 +0.4 2.6 gamma carbonic anhydrase family protein compare
MMJJ_RS08370 +0.4 2.2 hypothetical protein compare
MMJJ_RS06430 +0.3 2.6 haloacid dehalogenase compare
MMJJ_RS07030 +0.3 3.0 hypothetical protein compare
MMJJ_RS08775 +0.3 2.6 PfkB family carbohydrate kinase compare
MMJJ_RS04360 +0.3 2.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS08130 +0.3 0.4 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS07825 +0.3 1.6 YciI family protein compare
MMJJ_RS06740 +0.3 2.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS08040 +0.3 2.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS01210 +0.3 1.3 hypothetical protein compare
MMJJ_RS00040 +0.3 1.6 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS06720 +0.3 2.4 mechanosensitive ion channel family protein compare
MMJJ_RS07280 +0.3 1.8 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07420 +0.3 2.4 protease complex subunit PrcB family protein compare
MMJJ_RS05820 +0.3 1.5 DUF2304 domain-containing protein compare
MMJJ_RS08765 +0.3 2.3 glycosyltransferase family 9 protein compare
MMJJ_RS03410 +0.3 1.3 hypothetical protein compare
MMJJ_RS08760 +0.3 2.3 glycosyltransferase family 9 protein compare
MMJJ_RS06585 +0.3 2.2 alanine racemase compare
MMJJ_RS07590 +0.3 2.2 flap endonuclease-1 compare
MMJJ_RS05980 +0.3 2.0 DUF5400 domain-containing protein compare
MMJJ_RS01785 +0.3 0.5 50S ribosomal protein L14e compare
MMJJ_RS00420 +0.3 1.8 CBS domain-containing protein compare
MMJJ_RS06105 +0.3 2.1 DUF99 family protein compare
MMJJ_RS03250 +0.3 1.3 DUF2116 family Zn-ribbon domain-containing protein compare
MMJJ_RS05870 +0.3 0.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS03835 +0.3 1.6 DUF504 domain-containing protein compare
MMJJ_RS06495 +0.3 1.5 hypothetical protein compare
MMJJ_RS04525 +0.3 1.4 hypothetical protein compare
MMJJ_RS07215 +0.3 2.2 TIGR00341 family protein compare
MMJJ_RS01615 +0.3 1.5 MoaD/ThiS family protein compare
MMJJ_RS04575 +0.3 1.7 DUF116 domain-containing protein compare
MMJJ_RS08830 +0.3 1.1 hypothetical protein compare
MMJJ_RS08025 +0.3 0.9 hypothetical protein compare
MMJJ_RS05680 +0.3 2.3 hypothetical protein compare
MMJJ_RS03185 +0.3 0.5 alanine--tRNA ligase compare
MMJJ_RS05135 +0.3 0.5 50S ribosomal protein L18Ae compare
MMJJ_RS06120 +0.3 2.0 DUF4013 domain-containing protein compare
MMJJ_RS04480 +0.3 0.8 hypothetical protein compare
MMJJ_RS03080 +0.3 1.8 carbohydrate kinase family protein compare
MMJJ_RS01100 +0.3 0.6 helix-turn-helix domain-containing protein compare
MMJJ_RS06810 +0.3 2.2 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS09205 +0.2 1.5 hypothetical protein compare
MMJJ_RS07665 +0.2 2.3 formate dehydrogenase subunit alpha compare
MMJJ_RS06130 +0.2 1.5 hypothetical protein compare
MMJJ_RS07865 +0.2 1.8 zinc ribbon domain-containing protein compare
MMJJ_RS07650 +0.2 2.2 formate/nitrite transporter family protein compare
MMJJ_RS07365 +0.2 2.1 CatB-related O-acetyltransferase compare
MMJJ_RS05970 +0.2 0.7 MJ0307 family thioredoxin compare
MMJJ_RS04375 +0.2 0.8 hypothetical protein compare
MMJJ_RS02245 +0.2 1.8 DUF432 domain-containing protein compare
MMJJ_RS06800 +0.2 1.6 prefoldin subunit alpha compare
MMJJ_RS09090 +0.2 1.5 TetR/AcrR family transcriptional regulator compare
MMJJ_RS07445 +0.2 1.9 RlmF-related methyltransferase compare
MMJJ_RS02915 +0.2 1.3 hypothetical protein compare
MMJJ_RS09380 +0.2 0.8 hypothetical protein compare
MMJJ_RS02080 +0.2 1.9 AMP-binding protein compare
MMJJ_RS07740 +0.2 1.7 DUF2334 domain-containing protein compare
MMJJ_RS06205 +0.2 1.8 EamA family transporter compare
MMJJ_RS04585 +0.2 1.6 phenylacetate--CoA ligase compare
MMJJ_RS07255 +0.2 2.0 hypothetical protein compare
MMJJ_RS06275 +0.2 1.5 hypothetical protein compare
MMJJ_RS03375 +0.2 1.3 hypothetical protein compare
MMJJ_RS04055 +0.2 1.0 hypothetical protein compare
MMJJ_RS07425 +0.2 1.6 MBL fold metallo-hydrolase compare
MMJJ_RS07645 +0.2 1.6 selenium-binding protein compare
MMJJ_RS09370 +0.2 0.6 heavy-metal-associated domain-containing protein compare
MMJJ_RS03425 +0.2 1.1 DUF2080 family transposase-associated protein compare
MMJJ_RS08715 +0.2 1.2 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS09365 +0.2 1.1 hypothetical protein compare
MMJJ_RS08750 +0.2 1.7 glycosyltransferase compare
MMJJ_RS04175 +0.2 1.3 hypothetical protein compare
MMJJ_RS07610 +0.2 1.4 DUF2119 domain-containing protein compare
MMJJ_RS05770 +0.2 0.5 flagellar protein D compare
MMJJ_RS04465 +0.2 1.5 MTAP family purine nucleoside phosphorylase compare
MMJJ_RS08580 +0.2 1.1 YkgJ family cysteine cluster protein compare
MMJJ_RS09325 +0.2 1.2 hypothetical protein compare
MMJJ_RS06770 +0.2 1.7 hypothetical protein compare
MMJJ_RS01465 +0.2 1.3 METTL5 family protein compare
MMJJ_RS08515 +0.2 0.9 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS02110 +0.2 1.1 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS09405 +0.2 0.6 hypothetical protein compare
MMJJ_RS00055 +0.2 1.2 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS07210 +0.2 1.5 AmmeMemoRadiSam system protein B compare
MMJJ_RS03690 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS08350 +0.2 1.7 heavy metal translocating P-type ATPase compare
MMJJ_RS07595 +0.2 1.0 hypothetical protein compare
MMJJ_RS03285 +0.2 1.0 gamma-glutamylcyclotransferase compare
MMJJ_RS00140 +0.2 1.3 hypothetical protein compare
MMJJ_RS00415 +0.2 1.0 DedA family protein compare
MMJJ_RS04180 +0.2 0.6 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS01290 +0.2 1.4 hypothetical protein compare
MMJJ_RS06210 +0.2 1.2 hypothetical protein compare
MMJJ_RS07655 +0.2 1.5 hypothetical protein compare
MMJJ_RS01520 +0.2 0.8 helix-turn-helix transcriptional regulator compare
MMJJ_RS05510 +0.2 1.3 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS07680 +0.2 1.3 glucose-6-phosphate isomerase compare
MMJJ_RS09215 +0.2 1.5 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07450 +0.2 1.2 hypothetical protein compare
MMJJ_RS07620 +0.2 1.3 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS05890 +0.2 1.4 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS04405 +0.2 1.1 hypothetical protein compare
MMJJ_RS01140 +0.2 1.0 helix-turn-helix domain-containing protein compare
MMJJ_RS06285 +0.2 1.1 YchF/TatD family DNA exonuclease compare
MMJJ_RS06160 +0.2 1.3 stage II sporulation protein M compare
MMJJ_RS06450 +0.2 1.3 DUF3343 domain-containing protein compare
MMJJ_RS01125 +0.2 1.2 hypothetical protein compare
MMJJ_RS07485 +0.2 1.0 DedA family protein compare
MMJJ_RS07690 +0.2 1.2 glycosyltransferase family 4 protein compare
MMJJ_RS08075 +0.2 1.3 ATP-dependent DNA helicase compare
MMJJ_RS07670 +0.2 1.4 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS07270 +0.2 1.2 ribonuclease HII compare
MMJJ_RS09095 +0.1 1.0 MMPL family transporter compare
MMJJ_RS08930 +0.1 1.0 5'/3'-nucleotidase SurE compare
MMJJ_RS05335 +0.1 0.9 heavy metal-binding domain-containing protein compare
MMJJ_RS03955 +0.1 1.1 hypothetical protein compare
MMJJ_RS04090 +0.1 1.3 hypothetical protein compare
MMJJ_RS05035 +0.1 1.0 4Fe-4S binding protein compare
MMJJ_RS05765 +0.1 0.2 flagellar protein E compare
MMJJ_RS08735 +0.1 1.2 hypothetical protein compare
MMJJ_RS01060 +0.1 0.9 ABC transporter ATP-binding protein compare
MMJJ_RS07480 +0.1 1.2 FAD-dependent oxidoreductase compare
MMJJ_RS06190 +0.1 1.2 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06445 +0.1 1.3 hypothetical protein compare
MMJJ_RS06560 +0.1 1.2 site-2 protease family protein compare
MMJJ_RS03025 +0.1 1.2 Ig-like domain-containing protein compare
MMJJ_RS06470 +0.1 1.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS06765 +0.1 1.2 hypothetical protein compare
MMJJ_RS08740 +0.1 1.2 class I SAM-dependent methyltransferase compare
MMJJ_RS06455 +0.1 1.1 YeeE/YedE family protein compare
MMJJ_RS08175 +0.1 0.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07790 +0.1 1.1 hypothetical protein compare
MMJJ_RS06440 +0.1 1.0 DUF4870 domain-containing protein compare
MMJJ_RS04830 +0.1 1.0 zinc dependent phospholipase C family protein compare
MMJJ_RS06710 +0.1 1.2 TldD/PmbA family protein compare
MMJJ_RS03715 +0.1 1.0 hypothetical protein compare
MMJJ_RS09200 +0.1 1.1 Nre family DNA repair protein compare
MMJJ_RS06580 +0.1 1.1 alanine dehydrogenase compare
MMJJ_RS06465 +0.1 0.9 hypothetical protein compare
MMJJ_RS08295 +0.1 1.1 iron ABC transporter substrate-binding protein compare
MMJJ_RS03430 +0.1 0.5 winged helix-turn-helix domain-containing protein compare
MMJJ_RS08415 +0.1 0.9 corrinoid protein compare
MMJJ_RS00465 +0.1 1.0 selenouridine synthase SelU-like subunit compare
MMJJ_RS06755 +0.1 1.0 diadenylate cyclase compare
MMJJ_RS06115 +0.1 1.0 pyruvate kinase compare
MMJJ_RS02000 +0.1 0.6 AzlD domain-containing protein compare
MMJJ_RS07235 +0.1 1.1 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS01525 +0.1 1.0 ketopantoate reductase family protein compare
MMJJ_RS00510 +0.1 1.0 DEAD/DEAH box helicase compare
MMJJ_RS09100 +0.1 0.9 COG1361 S-layer family protein compare
MMJJ_RS04300 +0.1 0.8 hypothetical protein compare
MMJJ_RS05955 +0.1 1.0 radical SAM protein compare
MMJJ_RS08045 +0.1 1.0 transporter substrate-binding domain-containing protein compare
MMJJ_RS08565 +0.1 1.1 ATP-binding protein compare
MMJJ_RS04260 +0.1 1.0 molybdopterin molybdotransferase MoeA compare
MMJJ_RS01380 +0.1 0.8 DUF1890 domain-containing protein compare
MMJJ_RS07685 +0.1 1.0 glycogen/starch synthase compare
MMJJ_RS05605 +0.1 0.9 hypothetical protein compare
MMJJ_RS09230 +0.1 0.7 hypothetical protein compare
MMJJ_RS03885 +0.1 0.9 tetratricopeptide repeat protein compare
MMJJ_RS01965 +0.1 1.0 radical SAM protein compare
MMJJ_RS07765 +0.1 0.5 DMT family protein compare
MMJJ_RS09210 +0.1 0.9 lysine exporter LysO family protein compare
MMJJ_RS08345 +0.1 0.9 flavodoxin family protein compare
MMJJ_RS01920 +0.1 1.0 phosphoglycerate mutase compare
MMJJ_RS01010 +0.1 1.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS03605 +0.1 0.5 TIGR00297 family protein compare
MMJJ_RS07795 +0.1 0.8 cupin domain-containing protein compare
MMJJ_RS08705 +0.1 0.9 AEC family transporter compare
MMJJ_RS03440 +0.1 0.8 hypothetical protein compare
MMJJ_RS07820 +0.1 0.9 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS01405 +0.1 0.2 proline--tRNA ligase compare
MMJJ_RS06280 +0.1 0.9 hypothetical protein compare
MMJJ_RS07695 +0.1 0.9 glycoside hydrolase family 15 protein compare
MMJJ_RS03345 +0.1 0.5 hypothetical protein compare
MMJJ_RS05915 +0.1 0.5 multiprotein bridging factor aMBF1 compare
MMJJ_RS06550 +0.1 0.9 ABC transporter permease compare
MMJJ_RS00060 +0.1 0.8 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS02250 +0.1 0.8 mechanosensitive ion channel family protein compare
MMJJ_RS07220 +0.1 0.9 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS05760 +0.1 0.9 flagellar protein F compare
MMJJ_RS00675 +0.1 0.8 nitrogenase compare
MMJJ_RS06460 +0.1 0.8 cytochrome c compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in rich t1 experiments