Experiment set2IT049 for Sinorhizobium meliloti 1021

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
SMc00815 -4.5 -2.5 inosine 5'-monophosphate dehydrogenase compare
SMc02144 -4.1 -6.9 phosphate ABC transporter permease compare
SMc02850 -3.5 -3.8 DNA polymerase I compare
SMc01881 -3.1 -3.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02909 -2.8 -2.8 transglycosylase transmembrane protein compare
SMc01845 -2.7 -2.8 transglycosylase transmembrane protein compare
SMc02833 -2.6 -2.9 penicillin-insensitive murein endopeptidase compare
SMc00492 -2.5 -1.2 hypothetical protein compare
SMc00914 -2.5 -4.6 oxidoreductase compare
SMa0789 -2.5 -2.8 GntR family transcriptional regulator compare
SMc03967 -2.4 -1.9 Holliday junction resolvase compare
SMc02867 -2.2 -4.0 multidrug-efflux system transmembrane protein compare
SMc01147 -2.2 -4.2 coproporphyrinogen III oxidase compare
SMc02510 -2.1 -1.0 ferric uptake regulation protein compare
SMc02142 -2.1 -4.8 phosphate transporter ATP-binding protein compare
SMc03242 -2.1 -2.8 GTP-binding protein compare
SMc00580 -2.1 -3.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02140 -2.0 -1.8 phosphate regulon transcriptional regulatory protein compare
SMc02495 -1.9 -1.3 translaldolase compare
SMc00619 -1.8 -2.0 hypothetical protein compare
SMc04121 -1.8 -2.2 uracil phosphoribosyltransferase compare
SMc00987 -1.8 -2.5 hypothetical protein compare
SMc02778 -1.8 -1.1 hydroxyacid aldolase compare
SMc02147 -1.8 -4.6 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02435 -1.7 -2.3 methyltransferase compare
SMc00067 -1.7 -5.9 outer-membranne lipoprotein compare
SMc04296 -1.7 -1.1 cell division protein FtsZ compare
SMc02485 -1.6 -1.7 signal peptide protein compare
SMc00147 -1.6 -3.0 hypothetical protein compare
SMc02451 -1.6 -1.5 hypothetical protein compare
SMc02115 -1.6 -0.9 hypothetical protein compare
SMc03774 -1.6 -3.2 hypothetical protein compare
SMc02102 -1.5 -4.3 hypothetical protein compare
SMc00963 -1.5 -2.7 hypothetical protein compare
SMc00726 -1.5 -0.7 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02071 -1.5 -3.3 hydrolase glycosidase compare
SMc00239 -1.4 -0.9 hypothetical protein compare
SMc03100 -1.4 -1.8 hypothetical protein compare
SMc01438 -1.4 -4.0 protease precursor signal peptide protein compare
SMc00334 -1.4 -1.7 cytidylate kinase compare
SMa0211 -1.4 -1.3 hypothetical protein compare
SMc02484 -1.4 -4.4 amino acid efflux transmembrane protein compare
SMa2289 -1.4 -1.1 hypothetical protein compare
SMc02868 -1.4 -3.5 multidrug efflux system protein compare
SMa2299 -1.4 -2.4 hypothetical protein compare
SMc01505 -1.4 -1.3 hypothetical protein compare
SMc02234 -1.4 -1.5 hypothetical protein compare
SMc03773 -1.4 -6.3 hypothetical protein compare
SMc00295 -1.4 -0.7 hypothetical protein compare
SMc03763 -1.4 -2.2 cytosine-specific methyltransferase compare
SM_b20021 -1.4 -1.0 transcriptional regulator compare
SMc03140 -1.3 -3.9 transcriptional regulator compare
SMc04330 -1.3 -1.5 trimethylamine methyltransferase compare
SMc00396 -1.3 -2.9 hypothetical protein compare
SM_b20258 -1.3 -3.7 transcriptional regulator compare
SMc02149 -1.3 -1.4 hypothetical protein compare
SMc03850 -1.2 -1.0 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc04220 -1.2 -1.2 transcriptional regulator compare
SMc01880 -1.2 -2.3 pantoate--beta-alanine ligase compare
SMc03180 -1.2 -3.2 monovalent cation/H+ antiporter subunit C compare
SMc01187 -1.2 -1.7 rare lipoprotein A compare
SMc04024 -1.2 -3.3 membrane-bound lytic murein transglycosylase compare
SMc01501 -1.2 -2.8 mannitol 2-dehydrogenase compare
SMc04236 -1.1 -1.6 glycine-rich cell wall structural transmembrane protein compare
SMc02866 -1.1 -3.1 transcriptional regulator compare
SMc01361 -1.1 -2.8 dihydroorotase compare
SMc01342 -1.1 -3.8 hypothetical protein compare
SMc00760 -1.1 -2.8 recombinase A compare
SMc02232 -1.1 -2.5 hypothetical protein compare
SMc02799 -1.1 -1.7 16S rRNA methyltransferase GidB compare
SM_b20509 -1.1 -1.9 transcriptional regulator compare
SMc00806 -1.1 -1.8 hypothetical protein compare
SMc00555 -1.1 -1.0 colicin V production transmembrane protein compare
SMc02280 -1.1 -1.7 hypothetical protein compare
SMc00560 -1.1 -1.6 hypothetical protein compare
SMc01716 -1.1 -4.3 sensor histidine kinase transmembrane protein compare
SMc01877 -1.1 -4.4 DNA repair protein compare
SMc03785 -1.0 -2.7 dinucleoside polyphosphate hydrolase compare
SMc00191 -1.0 -1.1 hypothetical protein compare
SMc01857 -1.0 -2.1 cell division protein MraZ compare
SMc03182 -1.0 -3.8 pH adaptation potassium efflux system E transmembrane protein compare
SMc01853 -1.0 -3.2 hypothetical protein compare
SMc05020 -1.0 -1.0 entericidin A precursor compare
SMc01364 -1.0 -0.9 DNA topoisomerase I compare
SMc00650 -1.0 -1.3 hypothetical protein compare
SMc02143 -1.0 -2.2 phosphate ABC transporter permease compare
SMc03181 -1.0 -6.4 monovalent cation/H+ antiporter subunit D compare
SM_b22005 -1.0 -1.1 hypothetical protein compare
SM_b20897 -1.0 -1.1 hypothetical protein compare
SMc02724 -1.0 -2.6 hypothetical protein compare
SMc04391 -1.0 -1.2 3-ketoacyl-ACP reductase compare
SMc00667 -1.0 -1.6 hypothetical protein compare
SMc00602 -0.9 -3.7 excinuclease ABC subunit C compare
SMc02114 -0.9 -2.3 hypothetical protein compare
SMc04404 -0.9 -1.1 amino acid efflux transmembrane protein compare
SMc01146 -0.9 -2.5 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc03746 -0.9 -1.1 hypothetical protein compare
SMa2389 -0.9 -1.8 OsmC-like protein compare
SM_b20563 -0.9 -2.1 hypothetical protein compare
SMa0905 -0.9 -0.9 hypothetical protein compare
SM_b20119 -0.9 -2.0 hypothetical protein compare
SMa1239 -0.9 -1.3 NapD component of periplasmic nitrate reductase compare
SMc00579 -0.9 -3.3 dimethyladenosine transferase compare
SMa0326 -0.9 -1.4 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc01553 -0.9 -1.5 acyl carrier protein compare
SMc02753 -0.9 -1.0 PTS system transporter subunit IIA compare
SM_b20913 -0.9 -1.8 hypothetical protein compare
SM_b20655 -0.9 -1.5 hypothetical protein compare
SMc00296 -0.9 -5.1 POLY3-hydroxybutyrate polymerase compare
SMc02844 -0.9 -0.8 transcriptional regulator compare
SMc01579 -0.9 -0.8 hypothetical protein compare
SMc03236 -0.9 -1.7 glutamine amidotransferase compare
SMc04233 -0.9 -1.7 hypothetical protein compare
SMc02863 -0.9 -2.1 recombination protein F compare
SMc03227 -0.9 -2.9 hypothetical protein compare
SMa5033 -0.8 -0.7 hypothetical protein compare
SMc01404 -0.8 -2.6 aspartate racemase compare
SMc00072 -0.8 -0.9 peroxiredoxin protein compare
SMc01280 -0.8 -1.4 protease compare
SM_b20450 -0.8 -5.4 regulatory protein compare
SMc04169 -0.8 -5.4 transcriptional regulator compare
SM_b20427 -0.8 -1.6 amino acid ABC transporter ATP-binding protein compare
SMc02978 -0.8 -3.1 hypothetical protein compare
SM_b20746 -0.8 -0.7 hypothetical protein compare
SMc01461 -0.8 -2.9 DNA helicase II protein compare
SMc02858 -0.8 -0.5 chaperone protein DnaJ compare
SMc01701 -0.8 -1.3 hypothetical protein compare
SMc03179 -0.8 -5.3 monovalent cation/H+ antiporter subunit A compare
SMc00876 -0.8 -2.3 ATP-binding MRP protein compare
SM_b21329 -0.8 -1.6 hypothetical protein compare
SMc01502 -0.8 -2.8 hydrolase phosphatase compare
SM_b20595 -0.8 -2.1 cell division protein FtsK compare
SMc02303 -0.8 -1.3 partial transposase for insertion sequence element ISRM1 compare
SM_b21577 -0.8 -2.2 hypothetical protein compare
SMc01347 -0.8 -2.0 hypothetical protein compare
SMc02827 -0.7 -2.1 hypothetical protein compare
SMc01235 -0.7 -4.6 excinuclease ABC subunit A compare
SM_b20758 -0.7 -1.0 ArsR family transcriptional regulator compare
SMc01974 -0.7 -1.6 transcriptional regulator compare
SMc00948 -0.7 -4.9 glutamine synthetase compare
SMc01370 -0.7 -1.2 response regulator PleD compare
SMa1365 -0.7 -0.8 ATP-binding protein compare
SMc03993 -0.7 -1.9 hypothetical protein compare
SM_b21686 -0.7 -2.8 hypothetical protein compare
SMc04342 -0.7 -2.7 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase compare
SMc00691 -0.7 -1.3 site-specific tyrosine recombinase XerD compare
SMc02758 -0.7 -2.3 nucleotidyl transferase compare
SMc03052 -0.7 -2.0 flagellar basal body rod modification protein compare
SM_b20901 -0.7 -4.1 transcriptional regulator compare
SMc02077 -0.7 -1.9 exodeoxyribonuclease III protein compare
SMc00451 -0.7 -2.9 processing protease compare
SM_b21523 -0.7 -1.7 cell division inhibitor protein compare
SMc00665 -0.7 -1.0 hypothetical protein compare
SMc00025 -0.7 -2.7 pyruvate phosphate dikinase compare
SMc02709 -0.7 -2.1 hypothetical protein compare
SMc01826 -0.7 -2.0 ABC transporter permease compare
SM_b21580 -0.7 -0.9 hypothetical protein compare
SMc00351 -0.7 -0.6 hypothetical protein compare
SMc02580 -0.7 -2.1 hypothetical protein compare
SM_b21551 -0.7 -0.7 hypothetical protein compare
SMc03183 -0.7 -1.4 monovalent cation/H+ antiporter subunit F compare
SMc00228 -0.7 -4.4 ATP-dependent DNA helicase RecG compare
SMc01368 -0.7 -2.2 transport transmembrane protein compare
SMc01700 -0.7 -2.7 peptidyl-prolyl cis-trans isomerase A compare
SMc02861 -0.7 -1.3 phosphate transporter compare
SMc01089 -0.7 -0.8 hypothetical protein compare
SM_b20889 -0.7 -2.7 hypothetical protein compare
SMc01580 -0.7 -2.0 hypothetical protein compare
SMa1452 -0.7 -2.0 hypothetical protein compare
SMc02941 -0.7 -1.7 hypothetical protein compare
SMc00088 -0.7 -1.1 hypothetical protein compare
SM_b21350 -0.7 -2.4 GntR family transcriptional regulator compare
SMc00698 -0.7 -1.6 transcriptional regulator compare
SMc00557 -0.7 -2.0 alanine racemase compare
SMc02145 -0.7 -0.6 signal peptide protein compare
SMa1968 -0.7 -2.6 amidotransferase compare
SMc01208 -0.7 -1.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc03790 -0.7 -2.4 hypothetical protein compare
SMc04242 -0.6 -1.0 zinc uptake regulation protein compare
SMa1697 -0.6 -1.2 hypothetical protein compare
SMc01216 -0.6 -1.8 hypothetical protein compare
SMc00799 -0.6 -2.2 hypothetical protein compare
SMc01705 -0.6 -2.3 hypothetical protein compare
SM_b20830 -0.6 -2.6 arabinose-5-phosphate isomerase compare
SMc02979 -0.6 -2.5 hypothetical protein compare
SMc03139 -0.6 -3.6 hypothetical protein compare
SM_b21482 -0.6 -1.0 hypothetical protein compare
SM_b20271 -0.6 -1.0 hypothetical protein compare
SMc01606 -0.6 -3.4 permease compare
SMc04345 -0.6 -1.8 hypothetical protein compare
SMc00053 -0.6 -0.5 monovalent cation/H+ antiporter subunit C compare
SM_b21308 -0.6 -2.4 glycosyltransferase, forming alpha glycosyl linkages protein compare
SM_b21569 -0.6 -1.1 transcriptional regulator compare
SMc00959 -0.6 -1.1 hypothetical protein compare
SMc01204 -0.6 -3.1 transmembrane oxidoreductase compare
SMc01160 -0.6 -0.9 hypothetical protein compare
SM_b21174 -0.6 -1.7 phosphate uptake ABC transporter permease compare
SMc00461 -0.6 -0.9 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMa0112 -0.6 -1.1 hypothetical protein compare
SMc03134 -0.6 -1.8 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment